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The map label for this gene is ycjS [H]

Identifier: 148266642

GI number: 148266642

Start: 242795

End: 243874

Strand: Direct

Name: ycjS [H]

Synonym: SaurJH9_0202

Alternate gene names: 148266642

Gene position: 242795-243874 (Clockwise)

Preceding gene: 148266641

Following gene: 148266643

Centisome position: 8.35

GC content: 39.63

Gene sequence:

>1080_bases
ATGATGACGATTAAAGTTGGAATCATTGGGTGTGGTGGTATTGCGAATGGCAAGCACATGCCAAGTTTACAAAAAGTTGA
AAATGTTGAAATGATCGCATTTTGTGACGTAGACATTTCGAAAGCAGCGAGTGCGGCAGAAGCATACGGAACTGACAATG
CAAAGGTTTATGATGATTACAAAGCATTGTTAAAAGATGACACGATTGATGTTATCCATGTTTGTACGCCAAATGACTCG
CATTGTGAAATTACTGTAGCAGGGTTGCATGCCGGTAAGCATGTGATGTGTGAAAAACCAATGGCTAAAACGACAGCAGA
AGCTCAAAAAATGATAGATACAGCTAAATCAACAGGTAAAAAATTAACAATAGGTTATCAAAATCGCTTCAGACCAGATA
GTCAATTTTTACATCAAGCAGCGCAACGTGGCGACTTAGGAGACATTTACTTCGGAAAGGCACATGCCATTCGTCGTCGT
GCAGTACCGACATGGGGTGTCTTTCTAAACGAAGAAGCCCAAGGTGGAGGACCTTTAATCGATATTGGTACGCACGCATT
AGATTTAACGTTATGGATGATGGATAATTATGAACCAGAATCAGTGATGGGTTCAACATTCCATAAATTAAATAAGCAGC
ATGATGCGGCAAACGCTTGGGGTTCATGGAATCCAGATGAATTTACAGTTGAAGACTCTGCGTTTGGCTTTATTAAAATG
AAGAACGGAGCGACGATCATTTTAGAATCCGCTTGGGCGATTAATTCTTTAGAAGTGGATGAGGCAAAATGTTCATTATC
AGGAACGAAAGCAGGTGCTGATATGAAAGATGGTCTACGTATTCATGGTGAAGATATGGGCACACTTTATACCAAACACG
TTGAATTGGAAAACAAAGGCGTCGACTTTTATGAAGGTAATGAAGTGGATGAAGCTGAAGAAGAAGCAAAAGCTTGGATT
GATGCAGTTGTAAATGATACTGAACCAGTTGTGAAACCGGAACAAGCAATGGTAGTTACAAAAATTCTTGAAGCGATTTA
TCAGTCTGCAAAATCAGGCAAAGCAATTTACTTTGAATAA

Upstream 100 bases:

>100_bases
GGTTTAACAACAGGTGCGACAAAAGGTTAGTTTGAAATTAGGAGTGGGGCAGAATTGATAAAGAACCACTAATGACGATA
AAGATTAAAAGGAGGACGTT

Downstream 100 bases:

>100_bases
CATCATACGGTAAGGAGGCACATCATGACAAAATTAAAAGTTGGTGTGATAGGTGTTGGTGGCATTGCACAAGACCGTCA
TATTCCAGCATTGCTGAAAC

Product: oxidoreductase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MMTIKVGIIGCGGIANGKHMPSLQKVENVEMIAFCDVDISKAASAAEAYGTDNAKVYDDYKALLKDDTIDVIHVCTPNDS
HCEITVAGLHAGKHVMCEKPMAKTTAEAQKMIDTAKSTGKKLTIGYQNRFRPDSQFLHQAAQRGDLGDIYFGKAHAIRRR
AVPTWGVFLNEEAQGGGPLIDIGTHALDLTLWMMDNYEPESVMGSTFHKLNKQHDAANAWGSWNPDEFTVEDSAFGFIKM
KNGATIILESAWAINSLEVDEAKCSLSGTKAGADMKDGLRIHGEDMGTLYTKHVELENKGVDFYEGNEVDEAEEEAKAWI
DAVVNDTEPVVKPEQAMVVTKILEAIYQSAKSGKAIYFE

Sequences:

>Translated_359_residues
MMTIKVGIIGCGGIANGKHMPSLQKVENVEMIAFCDVDISKAASAAEAYGTDNAKVYDDYKALLKDDTIDVIHVCTPNDS
HCEITVAGLHAGKHVMCEKPMAKTTAEAQKMIDTAKSTGKKLTIGYQNRFRPDSQFLHQAAQRGDLGDIYFGKAHAIRRR
AVPTWGVFLNEEAQGGGPLIDIGTHALDLTLWMMDNYEPESVMGSTFHKLNKQHDAANAWGSWNPDEFTVEDSAFGFIKM
KNGATIILESAWAINSLEVDEAKCSLSGTKAGADMKDGLRIHGEDMGTLYTKHVELENKGVDFYEGNEVDEAEEEAKAWI
DAVVNDTEPVVKPEQAMVVTKILEAIYQSAKSGKAIYFE
>Mature_359_residues
MMTIKVGIIGCGGIANGKHMPSLQKVENVEMIAFCDVDISKAASAAEAYGTDNAKVYDDYKALLKDDTIDVIHVCTPNDS
HCEITVAGLHAGKHVMCEKPMAKTTAEAQKMIDTAKSTGKKLTIGYQNRFRPDSQFLHQAAQRGDLGDIYFGKAHAIRRR
AVPTWGVFLNEEAQGGGPLIDIGTHALDLTLWMMDNYEPESVMGSTFHKLNKQHDAANAWGSWNPDEFTVEDSAFGFIKM
KNGATIILESAWAINSLEVDEAKCSLSGTKAGADMKDGLRIHGEDMGTLYTKHVELENKGVDFYEGNEVDEAEEEAKAWI
DAVVNDTEPVVKPEQAMVVTKILEAIYQSAKSGKAIYFE

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Homo sapiens, GI7657212, Length=208, Percent_Identity=30.2884615384615, Blast_Score=88, Evalue=1e-17,
Organism=Escherichia coli, GI1787574, Length=357, Percent_Identity=37.2549019607843, Blast_Score=235, Evalue=4e-63,
Organism=Escherichia coli, GI87081947, Length=185, Percent_Identity=29.1891891891892, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1789848, Length=195, Percent_Identity=30.2564102564103, Blast_Score=72, Evalue=4e-14,
Organism=Saccharomyces cerevisiae, GI6323975, Length=119, Percent_Identity=31.9327731092437, Blast_Score=65, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24581117, Length=172, Percent_Identity=25.5813953488372, Blast_Score=72, Evalue=8e-13,
Organism=Drosophila melanogaster, GI24584727, Length=157, Percent_Identity=29.2993630573248, Blast_Score=69, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 39315; Mature: 39315

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTIKVGIIGCGGIANGKHMPSLQKVENVEMIAFCDVDISKAASAAEAYGTDNAKVYDDY
CEEEEEEEEEECCCCCCCCCCCHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCCEEHHHH
KALLKDDTIDVIHVCTPNDSHCEITVAGLHAGKHVMCEKPMAKTTAEAQKMIDTAKSTGK
HHHHCCCCEEEEEEECCCCCCEEEEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHCCC
KLTIGYQNRFRPDSQFLHQAAQRGDLGDIYFGKAHAIRRRAVPTWGVFLNEEAQGGGPLI
EEEEECCCCCCCHHHHHHHHHHCCCCCCEEECHHHHHHHHCCCEEEEEECCCCCCCCCEE
DIGTHALDLTLWMMDNYEPESVMGSTFHKLNKQHDAANAWGSWNPDEFTVEDSAFGFIKM
EECCCEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCEEEEEE
KNGATIILESAWAINSLEVDEAKCSLSGTKAGADMKDGLRIHGEDMGTLYTKHVELENKG
CCCCEEEEECCCCCCCEECCCHHEECCCCCCCCCCCCCCEEECCCCCEEEEEEEEECCCC
VDFYEGNEVDEAEEEAKAWIDAVVNDTEPVVKPEQAMVVTKILEAIYQSAKSGKAIYFE
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEC
>Mature Secondary Structure
MMTIKVGIIGCGGIANGKHMPSLQKVENVEMIAFCDVDISKAASAAEAYGTDNAKVYDDY
CEEEEEEEEEECCCCCCCCCCCHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCCEEHHHH
KALLKDDTIDVIHVCTPNDSHCEITVAGLHAGKHVMCEKPMAKTTAEAQKMIDTAKSTGK
HHHHCCCCEEEEEEECCCCCCEEEEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHCCC
KLTIGYQNRFRPDSQFLHQAAQRGDLGDIYFGKAHAIRRRAVPTWGVFLNEEAQGGGPLI
EEEEECCCCCCCHHHHHHHHHHCCCCCCEEECHHHHHHHHCCCEEEEEECCCCCCCCCEE
DIGTHALDLTLWMMDNYEPESVMGSTFHKLNKQHDAANAWGSWNPDEFTVEDSAFGFIKM
EECCCEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCEEEEEE
KNGATIILESAWAINSLEVDEAKCSLSGTKAGADMKDGLRIHGEDMGTLYTKHVELENKG
CCCCEEEEECCCCCCCEECCCHHEECCCCCCCCCCCCCCEEECCCCCEEEEEEEEECCCC
VDFYEGNEVDEAEEEAKAWIDAVVNDTEPVVKPEQAMVVTKILEAIYQSAKSGKAIYFE
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]