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The map label for this gene is yfiH [H]

Identifier: 148266644

GI number: 148266644

Start: 244994

End: 245962

Strand: Direct

Name: yfiH [H]

Synonym: SaurJH9_0204

Alternate gene names: 148266644

Gene position: 244994-245962 (Clockwise)

Preceding gene: 148266643

Following gene: 148266646

Centisome position: 8.43

GC content: 35.6

Gene sequence:

>969_bases
ATGAAAATAGGTGTATTTTCAGTATTATTTTACGATAAAAATTTTGAAGATATGTTAGATTATGTCGCAGAATCTGGATT
GGATATGATTGAAGTTGGAACAGGTGGTAACCCAGGAGATAAATTTTGTAAGTTAGATGAGTTGTTAGAAAATGAAGACA
AGCGACAAGCATTTATGAAGTCAATCACAGACAGAGGCTTACAAATAAGTGGTTTCAGTTGTCATAACAATCCAATTTCT
CCAGATCCGATAGAAGCGAAAGAAGCCGATGAAACGTTACGTAAAACAATCCGTTTAGCAAATCTATTAGACGTGCCAGT
TGTTAATACATTTTCTGGCATTGCAGGGTCAGATGATACCGCTAAAAAGCCTAATTGGCCTGTTACACCTTGGCCAACAG
CCTACTCTGAAATTTATGATTATCAGTGGAATGAAAAGTTGATACCATATTGGCAAGATTTAGCTGAGTTTGCAAAAGAG
CAAGATGTAAAAATTGCCATAGAGTTACATGCAGGATTTTTAGTTCATACACCATATACGATGTTAAAGTTACGTGAGGC
TACAAATGAATATATCGGTGCTAACTTAGATCCTAGTCATTTATGGTGGCAAGGTATTGATCCAATTGCTGCGATTCGCA
TATTAGGCCAAGCAAATGCAATTCATCACTTCCATGCTAAAGATACGTATATTAATCAAGAAAATGTAAATATGTATGGT
CTAACTGATATGCAACCATATGGTAACGTTGCGACAAGAGCATGGACATTCCGTACAGTTGGTTATGGACATAGTCCATA
TGTATGGGCAGATATCATAAGTCAACTTATTATTAATGGATATGATTATGTATTAAGTATTGAACATGAAGATCCTATTA
TGTCAGTAGAAGAAGGTTTCCAAAAAGCTTGTCAAACTTTGAAATCTGTTAATATTTACGACAAGCCAGCAGACATGTGG
TGGGCATAA

Upstream 100 bases:

>100_bases
AGCGATTTATCGTAGCGATCTTGATAACAAGAGCATACAACTTTAATGATTATTATATATAATACAAAATTCTCAATATA
AAAAGAAGGAGTGCTTTTCA

Downstream 100 bases:

>100_bases
TACGAACTCGAGGTTAGTCTGAAGTTTGTCTGAAGTAAGACTGGTGGCAGTGTTGAATGAATGCATATGTCGCCAAGCCA
TTGCCAAAAATTTCACACCT

Product: xylose isomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MKIGVFSVLFYDKNFEDMLDYVAESGLDMIEVGTGGNPGDKFCKLDELLENEDKRQAFMKSITDRGLQISGFSCHNNPIS
PDPIEAKEADETLRKTIRLANLLDVPVVNTFSGIAGSDDTAKKPNWPVTPWPTAYSEIYDYQWNEKLIPYWQDLAEFAKE
QDVKIAIELHAGFLVHTPYTMLKLREATNEYIGANLDPSHLWWQGIDPIAAIRILGQANAIHHFHAKDTYINQENVNMYG
LTDMQPYGNVATRAWTFRTVGYGHSPYVWADIISQLIINGYDYVLSIEHEDPIMSVEEGFQKACQTLKSVNIYDKPADMW
WA

Sequences:

>Translated_322_residues
MKIGVFSVLFYDKNFEDMLDYVAESGLDMIEVGTGGNPGDKFCKLDELLENEDKRQAFMKSITDRGLQISGFSCHNNPIS
PDPIEAKEADETLRKTIRLANLLDVPVVNTFSGIAGSDDTAKKPNWPVTPWPTAYSEIYDYQWNEKLIPYWQDLAEFAKE
QDVKIAIELHAGFLVHTPYTMLKLREATNEYIGANLDPSHLWWQGIDPIAAIRILGQANAIHHFHAKDTYINQENVNMYG
LTDMQPYGNVATRAWTFRTVGYGHSPYVWADIISQLIINGYDYVLSIEHEDPIMSVEEGFQKACQTLKSVNIYDKPADMW
WA
>Mature_322_residues
MKIGVFSVLFYDKNFEDMLDYVAESGLDMIEVGTGGNPGDKFCKLDELLENEDKRQAFMKSITDRGLQISGFSCHNNPIS
PDPIEAKEADETLRKTIRLANLLDVPVVNTFSGIAGSDDTAKKPNWPVTPWPTAYSEIYDYQWNEKLIPYWQDLAEFAKE
QDVKIAIELHAGFLVHTPYTMLKLREATNEYIGANLDPSHLWWQGIDPIAAIRILGQANAIHHFHAKDTYINQENVNMYG
LTDMQPYGNVATRAWTFRTVGYGHSPYVWADIISQLIINGYDYVLSIEHEDPIMSVEEGFQKACQTLKSVNIYDKPADMW
WA

Specific function: Unknown

COG id: COG1082

COG function: function code G; Sugar phosphate isomerases/epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011418
- InterPro:   IPR013022
- InterPro:   IPR012307 [H]

Pfam domain/function: PF01261 AP_endonuc_2; PF07582 AP_endonuc_2_N [H]

EC number: NA

Molecular weight: Translated: 36656; Mature: 36656

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIGVFSVLFYDKNFEDMLDYVAESGLDMIEVGTGGNPGDKFCKLDELLENEDKRQAFMK
CCEEEEEEEEECCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHH
SITDRGLQISGFSCHNNPISPDPIEAKEADETLRKTIRLANLLDVPVVNTFSGIAGSDDT
HHHHCCEEEECEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCC
AKKPNWPVTPWPTAYSEIYDYQWNEKLIPYWQDLAEFAKEQDVKIAIELHAGFLVHTPYT
CCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCEEEECCHH
MLKLREATNEYIGANLDPSHLWWQGIDPIAAIRILGQANAIHHFHAKDTYINQENVNMYG
HHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHCCCCEEEEECCCCEECCCCCEEEE
LTDMQPYGNVATRAWTFRTVGYGHSPYVWADIISQLIINGYDYVLSIEHEDPIMSVEEGF
CCCCCCCCCHHHHEEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHH
QKACQTLKSVNIYDKPADMWWA
HHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MKIGVFSVLFYDKNFEDMLDYVAESGLDMIEVGTGGNPGDKFCKLDELLENEDKRQAFMK
CCEEEEEEEEECCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHH
SITDRGLQISGFSCHNNPISPDPIEAKEADETLRKTIRLANLLDVPVVNTFSGIAGSDDT
HHHHCCEEEECEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCC
AKKPNWPVTPWPTAYSEIYDYQWNEKLIPYWQDLAEFAKEQDVKIAIELHAGFLVHTPYT
CCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCEEEECCHH
MLKLREATNEYIGANLDPSHLWWQGIDPIAAIRILGQANAIHHFHAKDTYINQENVNMYG
HHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHCCCCEEEEECCCCEECCCCCEEEE
LTDMQPYGNVATRAWTFRTVGYGHSPYVWADIISQLIINGYDYVLSIEHEDPIMSVEEGF
CCCCCCCCCHHHHEEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHH
QKACQTLKSVNIYDKPADMWWA
HHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8973323; 9384377; 8704981 [H]