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The map label for this gene is xerD [C]

Identifier: 148243782

GI number: 148243782

Start: 176979

End: 177920

Strand: Direct

Name: xerD [C]

Synonym: Acry_3265

Alternate gene names: 148243782

Gene position: 176979-177920 (Clockwise)

Preceding gene: 148243781

Following gene: 148243783

Centisome position: 86.93

GC content: 65.71

Gene sequence:

>942_bases
ATGAGCCTCACCTTCCAACTCGACCGCTATCTGGCTGTGCGGCGCCGCCTCGGCTACGACCTGAGCACCAGCGAGCGCAT
CCTTCGCCGCTTCACGCGGTTCGCCGACAGCGAGCGTGTGACGCATATCGACACGGCGCTGTTCCTGCGTTGGCACGCTA
CGCTCGGCGAGGCCAACGGCATGACGCGAGCGGCGCGGCTTACCGCCGTGCGCCTCTTCGCGCAGTGGCTGAGCAGCTTC
GATCCGGCGCATGAACCCCCACCACGGGGCCTGTTGCCGGACACTGTCATGCGCTCGCGTCCGCATATCTACAGCAATGC
CGAGGTCGCTTCGATTATCGCGGCCGCAAAGGCGCTGCCGTCGATCTGCGGGTTGCGCGGGCTGACTTGCTCGACACTGT
TCGCGCTCATCGCGGTCACGGGCTTGCGCATCAGCGAGGCGCTCGCGCTCGATGGGAACGACCTCGACGCCGATAATGGT
GTGCTGCGCGTCCGACAGGGCAAGAACGGCAAGGAGCGGTTGCTGCCGCTCGACCCCAGCACCGTCGAGCGACTGCTCAA
CTATCGCATCGAACGCGATCGGCTGATCGGTCATCCGGCGGTGCCGCTGTTCGTAACCGACAAGGCGACCCGGCTCACCG
ACTGCACGGCCCGCTACAACTTCGCGCAGGCGTGCCAGCAGATCGGCTTGCGATCCGAGCAGCAGTACCATCGGCATGGC
CGAGGGCCACGCATCCACGATCTGCGCCACACCTTCGCCGTGCGCACGATGATCGACTGGTACCGGACCGGCAAGGATCC
GGCGCGCGAGATGATCCGGCTGACGACCTATCTGGGTCATAGCAGCCCTTCCCGAACATACTGGTATCTGGAGGCGGTCC
CGGAACTGCTCGATCTGGCGATAGCCCGTGCCACCGCGAGCGGCGGGGAGATGGCACAATGA

Upstream 100 bases:

>100_bases
TGCGGCACCGCTCACGCACATCAACGATGATATATGCCCGTCTCGACATCGATGGGCTGCGGTCAGTGGCAATGCCTTGG
CCCGTGGCGGGAGGCGCGCA

Downstream 100 bases:

>100_bases
ACGCCGTCACCTTGCCCGCGCTGATCCAGCGCTTCTTCACCGACCGGCTTTGCACGCAACTGGAGGCGAGCCGACATACG
GTCGCCGGCTATCGCGATAC

Product: phage integrase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 312

Protein sequence:

>313_residues
MSLTFQLDRYLAVRRRLGYDLSTSERILRRFTRFADSERVTHIDTALFLRWHATLGEANGMTRAARLTAVRLFAQWLSSF
DPAHEPPPRGLLPDTVMRSRPHIYSNAEVASIIAAAKALPSICGLRGLTCSTLFALIAVTGLRISEALALDGNDLDADNG
VLRVRQGKNGKERLLPLDPSTVERLLNYRIERDRLIGHPAVPLFVTDKATRLTDCTARYNFAQACQQIGLRSEQQYHRHG
RGPRIHDLRHTFAVRTMIDWYRTGKDPAREMIRLTTYLGHSSPSRTYWYLEAVPELLDLAIARATASGGEMAQ

Sequences:

>Translated_313_residues
MSLTFQLDRYLAVRRRLGYDLSTSERILRRFTRFADSERVTHIDTALFLRWHATLGEANGMTRAARLTAVRLFAQWLSSF
DPAHEPPPRGLLPDTVMRSRPHIYSNAEVASIIAAAKALPSICGLRGLTCSTLFALIAVTGLRISEALALDGNDLDADNG
VLRVRQGKNGKERLLPLDPSTVERLLNYRIERDRLIGHPAVPLFVTDKATRLTDCTARYNFAQACQQIGLRSEQQYHRHG
RGPRIHDLRHTFAVRTMIDWYRTGKDPAREMIRLTTYLGHSSPSRTYWYLEAVPELLDLAIARATASGGEMAQ
>Mature_312_residues
SLTFQLDRYLAVRRRLGYDLSTSERILRRFTRFADSERVTHIDTALFLRWHATLGEANGMTRAARLTAVRLFAQWLSSFD
PAHEPPPRGLLPDTVMRSRPHIYSNAEVASIIAAAKALPSICGLRGLTCSTLFALIAVTGLRISEALALDGNDLDADNGV
LRVRQGKNGKERLLPLDPSTVERLLNYRIERDRLIGHPAVPLFVTDKATRLTDCTARYNFAQACQQIGLRSEQQYHRHGR
GPRIHDLRHTFAVRTMIDWYRTGKDPAREMIRLTTYLGHSSPSRTYWYLEAVPELLDLAIARATASGGEMAQ

Specific function: Site-Specific Tyrosine Recombinase, Which Acts By Catalyzing The Cutting And Rejoining Of The Recombining DNA Molecules. Binds Cooperatively To Specific DNA Consensus Sequences That Are Separated From Xerc Binding Sites By A Short Central Region, Forming

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 35309; Mature: 35178

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLTFQLDRYLAVRRRLGYDLSTSERILRRFTRFADSERVTHIDTALFLRWHATLGEANG
CCEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCC
MTRAARLTAVRLFAQWLSSFDPAHEPPPRGLLPDTVMRSRPHIYSNAEVASIIAAAKALP
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHH
SICGLRGLTCSTLFALIAVTGLRISEALALDGNDLDADNGVLRVRQGKNGKERLLPLDPS
HHHCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCEEEEECCCCCCCCCCCCCHH
TVERLLNYRIERDRLIGHPAVPLFVTDKATRLTDCTARYNFAQACQQIGLRSEQQYHRHG
HHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHCCHHHHHHHHCCCCHHHHHHCC
RGPRIHDLRHTFAVRTMIDWYRTGKDPAREMIRLTTYLGHSSPSRTYWYLEAVPELLDLA
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHH
IARATASGGEMAQ
HHHHCCCCCCCCC
>Mature Secondary Structure 
SLTFQLDRYLAVRRRLGYDLSTSERILRRFTRFADSERVTHIDTALFLRWHATLGEANG
CEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCC
MTRAARLTAVRLFAQWLSSFDPAHEPPPRGLLPDTVMRSRPHIYSNAEVASIIAAAKALP
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHH
SICGLRGLTCSTLFALIAVTGLRISEALALDGNDLDADNGVLRVRQGKNGKERLLPLDPS
HHHCCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCEEEEECCCCCCCCCCCCCHH
TVERLLNYRIERDRLIGHPAVPLFVTDKATRLTDCTARYNFAQACQQIGLRSEQQYHRHG
HHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHCCHHHHHHHHCCCCHHHHHHCC
RGPRIHDLRHTFAVRTMIDWYRTGKDPAREMIRLTTYLGHSSPSRTYWYLEAVPELLDLA
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHH
IARATASGGEMAQ
HHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]