| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is tyrA [H]
Identifier: 147674187
GI number: 147674187
Start: 235397
End: 236524
Strand: Direct
Name: tyrA [H]
Synonym: VC0395_A0227
Alternate gene names: 147674187
Gene position: 235397-236524 (Clockwise)
Preceding gene: 147673285
Following gene: 147673203
Centisome position: 7.78
GC content: 49.47
Gene sequence:
>1128_bases ATGGCCGTAGAGTTGAATCAGTTACGCGACCAAATCGATGAAGTCGATAAGCAGATGGTGGAGCTACTGGCGCGCCGTCT GGCATTGGTGGAGCAGGTCGGGCAAGTGAAAAGTCGATATGGGTTACCGATTTATGCTCCCGATCGTGAAGCGGCAATGC TCGCTTCACGTCGAGCGGAAGCGGAAAGCAAAGGTGTTCCGCCACAACTGATTGAAGATATTTTGCGCCGAACCATGCGT GAATCCTACGCCAGTGAAAAGGACTCCGGCTTTAAATGCCTCAATCCTGAGTTACGTTCCGTGGTGATCATCGGTGGTAA CGGTCAGCTTGGGCGACTATTTGGCCGTATGTTTAAACTCTCTGGCTATCAAGTCAAAGTGCTGGGTAGCCAAGATTGGG ACAAAGCGGATGAACTGCTCAGTGATGCTGGCTTAGTGATAGTCACGGTACCTATCCATTTGACGCTCGGTGTTATCGAA AAGCTGCGCCAGTTGCCGGACGATTGCATTTTGTGCGATCTCACCTCAATCAAAGCCAAGCCGCTTGCCGCTATGCTACA AGTGCACAAAGGTCCAGTGGTTGGGCTGCACCCTATGTTTGGCCCTGATGTTCCAAGCCTGGCGAAGCAGGTGATTGTTT ACTGTGATGGTCGAGGCAATGAACACTACCAATGGCTCTTGCAACAGTTTGCTATTTGGGGTGCAAGCTTGTGTCAGATT GATGCGACTGAACATGATCGTGGTATGACGCTTATTCAAGCTCTGCGCCACTTCACTTCCTTTGCTTATGGCTTGCATCT GACCAAAGAGAACCCGAACTTGGCACAACTGCTGAAACTCAGTTCACCGATTTACCGTTTAGAGCTTGCTATGGTCGGAC GGCTATTTGGGCAAGATCCCCATCTATACGGCGATATTATTCTCTCATCACCAGAAAATATTGAGATGATCCAGCGTTTT CATCGCTGCTTAAGCGAGGCGGTTGAGTTGGTGAGCGCGGGCGATAAGGCGAGTTTTGTGGCTCAATTTGAACGAGTTAG CCAGTGGTTTGGTGATTATTCACAGCAGTTTATGCATGAGAGCCAAAACTTGCTCAAACAAGCGAATGATGCGATCCACA GAGGTTAA
Upstream 100 bases:
>100_bases CTGTATAAATTGGTCAACGACTGAGGCATTATTACGTCGTGCGCATCAGGAACTTATTCCCTTTTTGCACAATCGTTTGC AAGGATAACAAGGATAGAAC
Downstream 100 bases:
>100_bases CGCATCATTCGCCTCTCACCGTCACTCTCACTGTCAATAACATCCCAAGTCCATTTGGGCTTGGGATTACTCATGCAGTC CTAAATCAGAAAGATGCTCT
Product: bifunctional chorismate mutase/prephenate dehydrogenase
Products: NA
Alternate protein names: Chorismate mutase; CM; Prephenate dehydrogenase; PDH [H]
Number of amino acids: Translated: 375; Mature: 374
Protein sequence:
>375_residues MAVELNQLRDQIDEVDKQMVELLARRLALVEQVGQVKSRYGLPIYAPDREAAMLASRRAEAESKGVPPQLIEDILRRTMR ESYASEKDSGFKCLNPELRSVVIIGGNGQLGRLFGRMFKLSGYQVKVLGSQDWDKADELLSDAGLVIVTVPIHLTLGVIE KLRQLPDDCILCDLTSIKAKPLAAMLQVHKGPVVGLHPMFGPDVPSLAKQVIVYCDGRGNEHYQWLLQQFAIWGASLCQI DATEHDRGMTLIQALRHFTSFAYGLHLTKENPNLAQLLKLSSPIYRLELAMVGRLFGQDPHLYGDIILSSPENIEMIQRF HRCLSEAVELVSAGDKASFVAQFERVSQWFGDYSQQFMHESQNLLKQANDAIHRG
Sequences:
>Translated_375_residues MAVELNQLRDQIDEVDKQMVELLARRLALVEQVGQVKSRYGLPIYAPDREAAMLASRRAEAESKGVPPQLIEDILRRTMR ESYASEKDSGFKCLNPELRSVVIIGGNGQLGRLFGRMFKLSGYQVKVLGSQDWDKADELLSDAGLVIVTVPIHLTLGVIE KLRQLPDDCILCDLTSIKAKPLAAMLQVHKGPVVGLHPMFGPDVPSLAKQVIVYCDGRGNEHYQWLLQQFAIWGASLCQI DATEHDRGMTLIQALRHFTSFAYGLHLTKENPNLAQLLKLSSPIYRLELAMVGRLFGQDPHLYGDIILSSPENIEMIQRF HRCLSEAVELVSAGDKASFVAQFERVSQWFGDYSQQFMHESQNLLKQANDAIHRG >Mature_374_residues AVELNQLRDQIDEVDKQMVELLARRLALVEQVGQVKSRYGLPIYAPDREAAMLASRRAEAESKGVPPQLIEDILRRTMRE SYASEKDSGFKCLNPELRSVVIIGGNGQLGRLFGRMFKLSGYQVKVLGSQDWDKADELLSDAGLVIVTVPIHLTLGVIEK LRQLPDDCILCDLTSIKAKPLAAMLQVHKGPVVGLHPMFGPDVPSLAKQVIVYCDGRGNEHYQWLLQQFAIWGASLCQID ATEHDRGMTLIQALRHFTSFAYGLHLTKENPNLAQLLKLSSPIYRLELAMVGRLFGQDPHLYGDIILSSPENIEMIQRFH RCLSEAVELVSAGDKASFVAQFERVSQWFGDYSQQFMHESQNLLKQANDAIHRG
Specific function: Tyrosine biosynthesis [C]
COG id: COG0287
COG function: function code E; Prephenate dehydrogenase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 prephenate/arogenate dehydrogenase domain [H]
Homologues:
Organism=Escherichia coli, GI1788952, Length=370, Percent_Identity=64.5945945945946, Blast_Score=508, Evalue=1e-145,
Paralogues:
None
Copy number: 500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR008244 - InterPro: IPR002701 - InterPro: IPR020822 - InterPro: IPR011277 - InterPro: IPR016040 - InterPro: IPR003099 [H]
Pfam domain/function: PF01817 CM_2; PF02153 PDH [H]
EC number: =5.4.99.5; =1.3.1.12 [H]
Molecular weight: Translated: 42063; Mature: 41932
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVELNQLRDQIDEVDKQMVELLARRLALVEQVGQVKSRYGLPIYAPDREAAMLASRRAE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHH AESKGVPPQLIEDILRRTMRESYASEKDSGFKCLNPELRSVVIIGGNGQLGRLFGRMFKL HHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCEEEEECCCCCHHHHHHHHHHC SGYQVKVLGSQDWDKADELLSDAGLVIVTVPIHLTLGVIEKLRQLPDDCILCDLTSIKAK CCCEEEEECCCCCHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHCCCCEEEEEHHHCCCH PLAAMLQVHKGPVVGLHPMFGPDVPSLAKQVIVYCDGRGNEHYQWLLQQFAIWGASLCQI HHHHHHHHHCCCEEEECCCCCCCHHHHHHHEEEEECCCCCHHHHHHHHHHHHHCCHHHEE DATEHDRGMTLIQALRHFTSFAYGLHLTKENPNLAQLLKLSSPIYRLELAMVGRLFGQDP ECCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCC HLYGDIILSSPENIEMIQRFHRCLSEAVELVSAGDKASFVAQFERVSQWFGDYSQQFMHE CEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH SQNLLKQANDAIHRG HHHHHHHHHHHHCCC >Mature Secondary Structure AVELNQLRDQIDEVDKQMVELLARRLALVEQVGQVKSRYGLPIYAPDREAAMLASRRAE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHH AESKGVPPQLIEDILRRTMRESYASEKDSGFKCLNPELRSVVIIGGNGQLGRLFGRMFKL HHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCEEEEECCCCCHHHHHHHHHHC SGYQVKVLGSQDWDKADELLSDAGLVIVTVPIHLTLGVIEKLRQLPDDCILCDLTSIKAK CCCEEEEECCCCCHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHCCCCEEEEEHHHCCCH PLAAMLQVHKGPVVGLHPMFGPDVPSLAKQVIVYCDGRGNEHYQWLLQQFAIWGASLCQI HHHHHHHHHCCCEEEECCCCCCCHHHHHHHEEEEECCCCCHHHHHHHHHHHHHCCHHHEE DATEHDRGMTLIQALRHFTSFAYGLHLTKENPNLAQLLKLSSPIYRLELAMVGRLFGQDP ECCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCC HLYGDIILSSPENIEMIQRFHRCLSEAVELVSAGDKASFVAQFERVSQWFGDYSQQFMHE CEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH SQNLLKQANDAIHRG HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1512561 [H]