| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
Click here to switch to the map view.
The map label for this gene is mviN [H]
Identifier: 147674115
GI number: 147674115
Start: 216819
End: 218396
Strand: Direct
Name: mviN [H]
Synonym: VC0395_A0212
Alternate gene names: 147674115
Gene position: 216819-218396 (Clockwise)
Preceding gene: 147675700
Following gene: 147675076
Centisome position: 7.17
GC content: 47.97
Gene sequence:
>1578_bases TTGTTCGAGGTTACCGTGAGTAAACGCTTACTCAAGTCTGGCATCATTGTAAGTGCTATGACTTTGATTTCTCGTGTTTT AGGTTTAGTGCGCGATGTGGTTGTGGCCAATTTGATGGGCGCAGGCGCCAGTGCTGACGTATTCTTTTTTGCCAACCGAA TTCCCAATTTTTTACGCCGATTATTTGCAGAAGGGGCCTTCTCTCAAGCATTTGTCCCGGTATTAACCGAATATCATGCC TCGGGTGATATCAATAAAACTCGAGATTTAATTGCGCGAGCGTCGGGAACTCTCGGTGTTTTAGTGACCATAGTGACGCT AATTGGAGTGCTCGGCTCTGGCGCAGTCACCGCATTATTTGGCGCAGGTTGGTTCCTAGACTGGTTGAATGGGGGCCCTG CTGCAGGAAAGTTTGAGTTAGCGAGCTTACTGCTCAAGATTACTTTTCCCTATTTGTGGTTTATCACCTTTGTTGCCTTG TCTGGGGCAATTTTAAACACCTTAGGTAAGTTTGCTGTCTCCTCTTTCACGCCAGTTTTCTTGAACGTGATGATGATTCT GTGTGCTTGGTACCTCTCGCCAAATCTAGAACAGCCGGAAGTGGGCTTAGCAATAGGCGTATTTTTAGGTGGTTTAGTCC AGTTTTTATTTCAACTGCCATTTTTGATCAAGGCTGGAGTGCTGGTTAGGCCTAAATGGGGCTGGAAAGATCCTGGGGTG GTGAAAATTCGCACACTGATGATTCCTGCACTGTTTGGAGTATCGGTCAGTCAAATCAACTTGTTATTTGACTCCTTCGT GGCCAGTTTTCTGCAAACCGGTTCGATCAGCTGGCTCTATTATTCGGATCGCCTGCTGGAGTTTCCCCTCGGCTTATTTG GAATTGCCATCGCGACGGTGATTTTGCCTGCCTTATCGCGTAAACATGTAGATGCGCACAGTGATGGGTTTGCCCACACC ATGGACTGGGGGATTCGCATGGTTACGTTTCTCGGCATTCCTGCCATGCTGGGTTTGATGGTACTGGCAAAACCTATGCT GATGGTGCTGTTTATGCGCGGGGAATTTACTTCAAGCGATGTAGAGCAAGCGTCCTATTCGTTACTCGCTTACTCATCTG GCTTGCTCAGCTTTATGTTGATCAAAGTGTTAGCGCCGGGATATTACTCACGTCAAGACACGAAAACCCCCGTACGTTAC GGAATTATCGCTATGGTCAGCAATATTGTGCTTAACGCAATCTTTGCGTGGTTTTACGGCTATGTTGGCTTGGCGGTCGC GACTTCGATGTCCGCTTTCCTGAATATGGCACTGCTTTATCGTGGTTTGCACTTACAAGGTGTTTATCATCTGACTCGCA AAACCGTCTGGTTTGTTGCGCGACTGGTGATGGCGGGAGCGGTAATGACTGGGGCGCTTTTGTGGCAGTTAGACACTATG GCTACATGGTTGAGCTGGGGAATCAGTCAGCGCGCATTGACGCTGACAGGCTTGATTGGCCTTGGCGTGGCATCTTATCT GGCTATTTTGCTGTTACTGGGTGTTCGTCTCAAAGATCTAAAAGCGGCGACAGAGTAG
Upstream 100 bases:
>100_bases GGCGGGGATTCTATCAGCATTTTTTTACCAATGCTAATACTTATCTGATCTCACTATGACATTCTTATCCTTTCGAATCA GATAATGTGGTTTTGACTCT
Downstream 100 bases:
>100_bases CGAGCTTTAGGTATAATCCGCCAGTTTCGCACCATGAGAATCAAAATATAGGTTTTAAGCATCTTCCGATGGAATTAATA CGCGGTATTCATAACATTCA
Product: MviN protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 525; Mature: 525
Protein sequence:
>525_residues MFEVTVSKRLLKSGIIVSAMTLISRVLGLVRDVVVANLMGAGASADVFFFANRIPNFLRRLFAEGAFSQAFVPVLTEYHA SGDINKTRDLIARASGTLGVLVTIVTLIGVLGSGAVTALFGAGWFLDWLNGGPAAGKFELASLLLKITFPYLWFITFVAL SGAILNTLGKFAVSSFTPVFLNVMMILCAWYLSPNLEQPEVGLAIGVFLGGLVQFLFQLPFLIKAGVLVRPKWGWKDPGV VKIRTLMIPALFGVSVSQINLLFDSFVASFLQTGSISWLYYSDRLLEFPLGLFGIAIATVILPALSRKHVDAHSDGFAHT MDWGIRMVTFLGIPAMLGLMVLAKPMLMVLFMRGEFTSSDVEQASYSLLAYSSGLLSFMLIKVLAPGYYSRQDTKTPVRY GIIAMVSNIVLNAIFAWFYGYVGLAVATSMSAFLNMALLYRGLHLQGVYHLTRKTVWFVARLVMAGAVMTGALLWQLDTM ATWLSWGISQRALTLTGLIGLGVASYLAILLLLGVRLKDLKAATE
Sequences:
>Translated_525_residues MFEVTVSKRLLKSGIIVSAMTLISRVLGLVRDVVVANLMGAGASADVFFFANRIPNFLRRLFAEGAFSQAFVPVLTEYHA SGDINKTRDLIARASGTLGVLVTIVTLIGVLGSGAVTALFGAGWFLDWLNGGPAAGKFELASLLLKITFPYLWFITFVAL SGAILNTLGKFAVSSFTPVFLNVMMILCAWYLSPNLEQPEVGLAIGVFLGGLVQFLFQLPFLIKAGVLVRPKWGWKDPGV VKIRTLMIPALFGVSVSQINLLFDSFVASFLQTGSISWLYYSDRLLEFPLGLFGIAIATVILPALSRKHVDAHSDGFAHT MDWGIRMVTFLGIPAMLGLMVLAKPMLMVLFMRGEFTSSDVEQASYSLLAYSSGLLSFMLIKVLAPGYYSRQDTKTPVRY GIIAMVSNIVLNAIFAWFYGYVGLAVATSMSAFLNMALLYRGLHLQGVYHLTRKTVWFVARLVMAGAVMTGALLWQLDTM ATWLSWGISQRALTLTGLIGLGVASYLAILLLLGVRLKDLKAATE >Mature_525_residues MFEVTVSKRLLKSGIIVSAMTLISRVLGLVRDVVVANLMGAGASADVFFFANRIPNFLRRLFAEGAFSQAFVPVLTEYHA SGDINKTRDLIARASGTLGVLVTIVTLIGVLGSGAVTALFGAGWFLDWLNGGPAAGKFELASLLLKITFPYLWFITFVAL SGAILNTLGKFAVSSFTPVFLNVMMILCAWYLSPNLEQPEVGLAIGVFLGGLVQFLFQLPFLIKAGVLVRPKWGWKDPGV VKIRTLMIPALFGVSVSQINLLFDSFVASFLQTGSISWLYYSDRLLEFPLGLFGIAIATVILPALSRKHVDAHSDGFAHT MDWGIRMVTFLGIPAMLGLMVLAKPMLMVLFMRGEFTSSDVEQASYSLLAYSSGLLSFMLIKVLAPGYYSRQDTKTPVRY GIIAMVSNIVLNAIFAWFYGYVGLAVATSMSAFLNMALLYRGLHLQGVYHLTRKTVWFVARLVMAGAVMTGALLWQLDTM ATWLSWGISQRALTLTGLIGLGVASYLAILLLLGVRLKDLKAATE
Specific function: Unknown
COG id: COG0728
COG function: function code R; Uncharacterized membrane protein, putative virulence factor
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mviN family [H]
Homologues:
Organism=Escherichia coli, GI1787309, Length=516, Percent_Identity=41.8604651162791, Blast_Score=385, Evalue=1e-108,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004268 [H]
Pfam domain/function: PF03023 MVIN [H]
EC number: NA
Molecular weight: Translated: 57172; Mature: 57172
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFEVTVSKRLLKSGIIVSAMTLISRVLGLVRDVVVANLMGAGASADVFFFANRIPNFLRR CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH LFAEGAFSQAFVPVLTEYHASGDINKTRDLIARASGTLGVLVTIVTLIGVLGSGAVTALF HHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHH GAGWFLDWLNGGPAAGKFELASLLLKITFPYLWFITFVALSGAILNTLGKFAVSSFTPVF HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH LNVMMILCAWYLSPNLEQPEVGLAIGVFLGGLVQFLFQLPFLIKAGVLVRPKWGWKDPGV HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCC VKIRTLMIPALFGVSVSQINLLFDSFVASFLQTGSISWLYYSDRLLEFPLGLFGIAIATV EEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHH ILPALSRKHVDAHSDGFAHTMDWGIRMVTFLGIPAMLGLMVLAKPMLMVLFMRGEFTSSD HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH VEQASYSLLAYSSGLLSFMLIKVLAPGYYSRQDTKTPVRYGIIAMVSNIVLNAIFAWFYG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH YVGLAVATSMSAFLNMALLYRGLHLQGVYHLTRKTVWFVARLVMAGAVMTGALLWQLDTM HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATWLSWGISQRALTLTGLIGLGVASYLAILLLLGVRLKDLKAATE HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCC >Mature Secondary Structure MFEVTVSKRLLKSGIIVSAMTLISRVLGLVRDVVVANLMGAGASADVFFFANRIPNFLRR CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH LFAEGAFSQAFVPVLTEYHASGDINKTRDLIARASGTLGVLVTIVTLIGVLGSGAVTALF HHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHH GAGWFLDWLNGGPAAGKFELASLLLKITFPYLWFITFVALSGAILNTLGKFAVSSFTPVF HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH LNVMMILCAWYLSPNLEQPEVGLAIGVFLGGLVQFLFQLPFLIKAGVLVRPKWGWKDPGV HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCC VKIRTLMIPALFGVSVSQINLLFDSFVASFLQTGSISWLYYSDRLLEFPLGLFGIAIATV EEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHH ILPALSRKHVDAHSDGFAHTMDWGIRMVTFLGIPAMLGLMVLAKPMLMVLFMRGEFTSSD HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH VEQASYSLLAYSSGLLSFMLIKVLAPGYYSRQDTKTPVRYGIIAMVSNIVLNAIFAWFYG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH YVGLAVATSMSAFLNMALLYRGLHLQGVYHLTRKTVWFVARLVMAGAVMTGALLWQLDTM HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATWLSWGISQRALTLTGLIGLGVASYLAILLLLGVRLKDLKAATE HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9457888; 10952301 [H]