Click here to switch to the map view.

The map label for this gene is ribF [H]

Identifier: 147675076

GI number: 147675076

Start: 218465

End: 219433

Strand: Direct

Name: ribF [H]

Synonym: VC0395_A0213

Alternate gene names: 147675076

Gene position: 218465-219433 (Clockwise)

Preceding gene: 147674115

Following gene: 147675239

Centisome position: 7.22

GC content: 50.46

Gene sequence:

>969_bases
ATGGAATTAATACGCGGTATTCATAACATTCAATCTCGCCATCACGGCTGTGTATTGACGATTGGCAACTTTGACGGTGT
TCATCTTGGTCATCAACAAGTGCTCAGTCAGGTGGTGCAGCGTGCCCAGCAGATGGGTTTGCCTTCGGTAGTGATGACGT
TTGAACCTCAGCCCCTAGAGCTGTTTGCCAAACAACAAGCGCCCGCGCGTTTAACACGTCTGCGCGATAAGTTTGTGCAA
CTCAGCAAACTCGGGGTTGATCGCCTGCTGTGCGTTAATTTCAACCATCATTTTGCCCAATTGGATGCCCACACGTTTAT
TCGTGACTTGTTGGTGACCCGTTTGGGTGTTAAGTTTCTGGTGGTTGGTGATGATTTCTGCTTCGGTAAAGAGCGTCAAG
GTAACTTTGCGCTGCTACAACAGGCAGGGCAAGCCTTAGGTTTTGAGGTGGTGAGCACCCGAAGCTTCTGTTTGCAACAA
CTGCGCGTGAGTAGCACCGCGATTCGTGAAGCGTTAGCGGCTGACCAATTGAGCAGTGCCTCGGCTATGTTGGGGCGCCA
TTACAGCATCAGTGGTCGTGTCTCGCATGGTCAAAAACTCGGGCGAACAATCGGCTTTCCCACCGCTAACATTCCACTGA
AACGTTGTGTTTCTCCGGTTTCTGGAGTGTATGTGGTTGAAGCCTATGGTTTGGGCCCAACGCCAGTCGGTGGGGTTGCC
AATATCGGTAATCGTCCGACGGTCGATGGTGTTCGCCAGCAGCTAGAAGTGCACTTTTTTGACTTTCAAGGCAACCTGTA
CGGAAAGCAGTTGGAAGTCGCGCTGTTACATAAACTACGTGATGAGCGCAAATTCGCCTCTTTTGAGGCACTAAAGCAAC
AAATTGAATTGGATGCTGAAGCAGCAAGGGTGTGGCTGCGTCAGCTTAAGGGTTGCTCGGTTGATTCCACCCAGCAACAA
CATGTCTAA

Upstream 100 bases:

>100_bases
GTCTCAAAGATCTAAAAGCGGCGACAGAGTAGCGAGCTTTAGGTATAATCCGCCAGTTTCGCACCATGAGAATCAAAATA
TAGGTTTTAAGCATCTTCCG

Downstream 100 bases:

>100_bases
CTTCGCCCAATATAACGGAATTAAGAATCGATGAGTGAGTATAAAGATACCCTGAACCTTCCTGAAACAGGGTTTCCAAT
GCGCGGCGATCTGGCCAAAC

Product: bifunctional riboflavin kinase/FMN adenylyltransferase

Products: NA

Alternate protein names: Riboflavin kinase; Flavokinase; FMN adenylyltransferase; FAD pyrophosphorylase; FAD synthase [H]

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MELIRGIHNIQSRHHGCVLTIGNFDGVHLGHQQVLSQVVQRAQQMGLPSVVMTFEPQPLELFAKQQAPARLTRLRDKFVQ
LSKLGVDRLLCVNFNHHFAQLDAHTFIRDLLVTRLGVKFLVVGDDFCFGKERQGNFALLQQAGQALGFEVVSTRSFCLQQ
LRVSSTAIREALAADQLSSASAMLGRHYSISGRVSHGQKLGRTIGFPTANIPLKRCVSPVSGVYVVEAYGLGPTPVGGVA
NIGNRPTVDGVRQQLEVHFFDFQGNLYGKQLEVALLHKLRDERKFASFEALKQQIELDAEAARVWLRQLKGCSVDSTQQQ
HV

Sequences:

>Translated_322_residues
MELIRGIHNIQSRHHGCVLTIGNFDGVHLGHQQVLSQVVQRAQQMGLPSVVMTFEPQPLELFAKQQAPARLTRLRDKFVQ
LSKLGVDRLLCVNFNHHFAQLDAHTFIRDLLVTRLGVKFLVVGDDFCFGKERQGNFALLQQAGQALGFEVVSTRSFCLQQ
LRVSSTAIREALAADQLSSASAMLGRHYSISGRVSHGQKLGRTIGFPTANIPLKRCVSPVSGVYVVEAYGLGPTPVGGVA
NIGNRPTVDGVRQQLEVHFFDFQGNLYGKQLEVALLHKLRDERKFASFEALKQQIELDAEAARVWLRQLKGCSVDSTQQQ
HV
>Mature_322_residues
MELIRGIHNIQSRHHGCVLTIGNFDGVHLGHQQVLSQVVQRAQQMGLPSVVMTFEPQPLELFAKQQAPARLTRLRDKFVQ
LSKLGVDRLLCVNFNHHFAQLDAHTFIRDLLVTRLGVKFLVVGDDFCFGKERQGNFALLQQAGQALGFEVVSTRSFCLQQ
LRVSSTAIREALAADQLSSASAMLGRHYSISGRVSHGQKLGRTIGFPTANIPLKRCVSPVSGVYVVEAYGLGPTPVGGVA
NIGNRPTVDGVRQQLEVHFFDFQGNLYGKQLEVALLHKLRDERKFASFEALKQQIELDAEAARVWLRQLKGCSVDSTQQQ
HV

Specific function: Unknown

COG id: COG0196

COG function: function code H; FAD synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribF family [H]

Homologues:

Organism=Escherichia coli, GI1786208, Length=307, Percent_Identity=57.9804560260586, Blast_Score=359, Evalue=1e-100,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015864
- InterPro:   IPR015865
- InterPro:   IPR002606
- InterPro:   IPR014729 [H]

Pfam domain/function: PF06574 FAD_syn; PF01687 Flavokinase [H]

EC number: =2.7.1.26; =2.7.7.2 [H]

Molecular weight: Translated: 35729; Mature: 35729

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELIRGIHNIQSRHHGCVLTIGNFDGVHLGHQQVLSQVVQRAQQMGLPSVVMTFEPQPLE
CHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHH
LFAKQQAPARLTRLRDKFVQLSKLGVDRLLCVNFNHHFAQLDAHTFIRDLLVTRLGVKFL
HHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCEEE
VVGDDFCFGKERQGNFALLQQAGQALGFEVVSTRSFCLQQLRVSSTAIREALAADQLSSA
EEECCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAMLGRHYSISGRVSHGQKLGRTIGFPTANIPLKRCVSPVSGVYVVEAYGLGPTPVGGVA
HHHHCCCEEECCCCHHHHHHHHHCCCCCCCCCHHHHCCCCCCEEEEEEECCCCCCCCCCC
NIGNRPTVDGVRQQLEVHFFDFQGNLYGKQLEVALLHKLRDERKFASFEALKQQIELDAE
CCCCCCCHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
AARVWLRQLKGCSVDSTQQQHV
HHHHHHHHHCCCCCCCCHHCCC
>Mature Secondary Structure
MELIRGIHNIQSRHHGCVLTIGNFDGVHLGHQQVLSQVVQRAQQMGLPSVVMTFEPQPLE
CHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHH
LFAKQQAPARLTRLRDKFVQLSKLGVDRLLCVNFNHHFAQLDAHTFIRDLLVTRLGVKFL
HHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCEEE
VVGDDFCFGKERQGNFALLQQAGQALGFEVVSTRSFCLQQLRVSSTAIREALAADQLSSA
EEECCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAMLGRHYSISGRVSHGQKLGRTIGFPTANIPLKRCVSPVSGVYVVEAYGLGPTPVGGVA
HHHHCCCEEECCCCHHHHHHHHHCCCCCCCCCHHHHCCCCCCEEEEEEECCCCCCCCCCC
NIGNRPTVDGVRQQLEVHFFDFQGNLYGKQLEVALLHKLRDERKFASFEALKQQIELDAE
CCCCCCCHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
AARVWLRQLKGCSVDSTQQQHV
HHHHHHHHHCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]