Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
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Accession | NC_009457 |
Length | 3,024,069 |
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The map label for this gene is thrC [H]
Identifier: 147673667
GI number: 147673667
Start: 2070829
End: 2072109
Strand: Reverse
Name: thrC [H]
Synonym: VC0395_A1941
Alternate gene names: 147673667
Gene position: 2072109-2070829 (Counterclockwise)
Preceding gene: 147673067
Following gene: 147674847
Centisome position: 68.52
GC content: 49.57
Gene sequence:
>1281_bases ATGAAGCTGTACAACATAAAAGAAAATGATGAACAAGTCTCTTTTGGTCAAGCCGTTCGCCAAGGGTTAGGCCGCAATCA AGGCCTATTTTTTCCGGCACAATTGCCGAAGTTTGACGATATTGATGCGCTATTAGCCGAAGATTTCGTCTCTCGTAGCA GCAAGATTTTATCGGCGTTGATTGGCGATGAACTGCCTGCGGATAAAATTCGCGCTATGGTGGATTCCGCCTTTCAATTC GCCGCACCGATTGCCAAAGTGAAAGAGGGCGTTTACGCGCTCGAATTGTTCCACGGGCCAACGCTCGCGTTTAAAGATTT TGGTGGTCGCTTTATGGCCCAGTCTCTGGCGGCGGTCTCGAACGGCGGAAAAATCACGATTTTGACGGCGACATCCGGTG ATACCGGCGCTGCTGTTGCGCACGCATTTTATGGCATGCCAGATATTAATGTTGTGATCCTTTATCCGAAAGGAAAAATC AGTCCGCTGCAAGAAAAGCTGTTCTGCACATTAGGTAAAAACATTCACACCGTGGCGATCAATGGTGATTTTGATGCTTG CCAAGCGCTAGTGAAACAAGCTTTTGATGACGCAGAGCTGCGTCAACAGATCGGTTTGAACTCCGCCAACTCGATCAACA TCAGCCGTTTGATGGCGCAAATCTGTTACTACTTTGAAGCCGCTGCGCAGATGAGCAAAGCTGAGCGTGAAAATCTGGTG ATTTCAGTGCCTAGTGGCAACTTTGGTAACTTAACCGCAGGGCTGTTAGCCAAAGCACTGGGTTTATCGGTGAAGCGCTT TATTGCGGCAACCAATGCCAACGATACAGTGCCACGTTACTTGGAAACGGGACGTTGGGAACCCAAACCCACGGTAGCAA CAACGTCAAATGCGATGGATGTCAGCCAACCGAACAACTGGCCGCGTATCGAAGAGCTCTGCCAACGTATGGGATGGGGC TTAGAAACGCTGGGCAAAGGCGCGGTTTCTGACGAGGAAAGTGCGCAAGCCGTACAAGAACTTTACGATCTAGGCTACTT GTGTGAACCGCATGGTTCGATTGCTTACCGTGTATTGGAAGAGCAGCGCCAGCTGCAAGAAACGGGGCTGTTCTTATGTA CCGCGCATCCCGCCAAATTCAAAGAAGTGGTGGACGATATTTTAGGTACCGACATTGCTCTACCAGCGCCATTGGCAAAA CATGCGGCGATGGAATTGCTCTCACAAGAGCTGAATGCCGATTTCGCAGCGCTGCGTACGTTACTGGTGAATGTGAAATA A
Upstream 100 bases:
>100_bases TGGCACGTTGGCTTGAGCAAAACTATGTGCAAAATGAAGAAGGATTCGTCCACATTTGTCGTCTAGACAAGCAAGGTTCG AAAGTAACAGGAAGTGAGCT
Downstream 100 bases:
>100_bases TCCGCGGATTTGAGAAAGCGAAGATAATAAAAAACGGTGCTCATTGAGCACCGTTTTAGTATGGATTCTTTACTGACGAT TACAGAGATTCAGTGAAAGT
Product: threonine synthase
Products: NA
Alternate protein names: TS [H]
Number of amino acids: Translated: 426; Mature: 426
Protein sequence:
>426_residues MKLYNIKENDEQVSFGQAVRQGLGRNQGLFFPAQLPKFDDIDALLAEDFVSRSSKILSALIGDELPADKIRAMVDSAFQF AAPIAKVKEGVYALELFHGPTLAFKDFGGRFMAQSLAAVSNGGKITILTATSGDTGAAVAHAFYGMPDINVVILYPKGKI SPLQEKLFCTLGKNIHTVAINGDFDACQALVKQAFDDAELRQQIGLNSANSINISRLMAQICYYFEAAAQMSKAERENLV ISVPSGNFGNLTAGLLAKALGLSVKRFIAATNANDTVPRYLETGRWEPKPTVATTSNAMDVSQPNNWPRIEELCQRMGWG LETLGKGAVSDEESAQAVQELYDLGYLCEPHGSIAYRVLEEQRQLQETGLFLCTAHPAKFKEVVDDILGTDIALPAPLAK HAAMELLSQELNADFAALRTLLVNVK
Sequences:
>Translated_426_residues MKLYNIKENDEQVSFGQAVRQGLGRNQGLFFPAQLPKFDDIDALLAEDFVSRSSKILSALIGDELPADKIRAMVDSAFQF AAPIAKVKEGVYALELFHGPTLAFKDFGGRFMAQSLAAVSNGGKITILTATSGDTGAAVAHAFYGMPDINVVILYPKGKI SPLQEKLFCTLGKNIHTVAINGDFDACQALVKQAFDDAELRQQIGLNSANSINISRLMAQICYYFEAAAQMSKAERENLV ISVPSGNFGNLTAGLLAKALGLSVKRFIAATNANDTVPRYLETGRWEPKPTVATTSNAMDVSQPNNWPRIEELCQRMGWG LETLGKGAVSDEESAQAVQELYDLGYLCEPHGSIAYRVLEEQRQLQETGLFLCTAHPAKFKEVVDDILGTDIALPAPLAK HAAMELLSQELNADFAALRTLLVNVK >Mature_426_residues MKLYNIKENDEQVSFGQAVRQGLGRNQGLFFPAQLPKFDDIDALLAEDFVSRSSKILSALIGDELPADKIRAMVDSAFQF AAPIAKVKEGVYALELFHGPTLAFKDFGGRFMAQSLAAVSNGGKITILTATSGDTGAAVAHAFYGMPDINVVILYPKGKI SPLQEKLFCTLGKNIHTVAINGDFDACQALVKQAFDDAELRQQIGLNSANSINISRLMAQICYYFEAAAQMSKAERENLV ISVPSGNFGNLTAGLLAKALGLSVKRFIAATNANDTVPRYLETGRWEPKPTVATTSNAMDVSQPNNWPRIEELCQRMGWG LETLGKGAVSDEESAQAVQELYDLGYLCEPHGSIAYRVLEEQRQLQETGLFLCTAHPAKFKEVVDDILGTDIALPAPLAK HAAMELLSQELNADFAALRTLLVNVK
Specific function: Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine [H]
COG id: COG0498
COG function: function code E; Threonine synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the threonine synthase family [H]
Homologues:
Organism=Homo sapiens, GI153792148, Length=421, Percent_Identity=29.4536817102138, Blast_Score=159, Evalue=6e-39, Organism=Homo sapiens, GI149193323, Length=421, Percent_Identity=27.790973871734, Blast_Score=155, Evalue=5e-38, Organism=Escherichia coli, GI1786185, Length=426, Percent_Identity=67.6056338028169, Blast_Score=573, Evalue=1e-165, Organism=Saccharomyces cerevisiae, GI6319901, Length=448, Percent_Identity=32.3660714285714, Blast_Score=212, Evalue=7e-56,
Paralogues:
None
Copy number: 560 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR004450 [H]
Pfam domain/function: PF00291 PALP [H]
EC number: =4.2.3.1 [H]
Molecular weight: Translated: 46265; Mature: 46265
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLYNIKENDEQVSFGQAVRQGLGRNQGLFFPAQLPKFDDIDALLAEDFVSRSSKILSAL CCCCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH IGDELPADKIRAMVDSAFQFAAPIAKVKEGVYALELFHGPTLAFKDFGGRFMAQSLAAVS HCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEHHHCCCHHHHHHHHHHC NGGKITILTATSGDTGAAVAHAFYGMPDINVVILYPKGKISPLQEKLFCTLGKNIHTVAI CCCEEEEEEECCCCCHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCEEEEEE NGDFDACQALVKQAFDDAELRQQIGLNSANSINISRLMAQICYYFEAAAQMSKAERENLV CCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEE ISVPSGNFGNLTAGLLAKALGLSVKRFIAATNANDTVPRYLETGRWEPKPTVATTSNAMD EECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCEEECCCCCC VSQPNNWPRIEELCQRMGWGLETLGKGAVSDEESAQAVQELYDLGYLCEPHGSIAYRVLE CCCCCCCHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHCCCEECCCCHHHHHHHH EQRQLQETGLFLCTAHPAKFKEVVDDILGTDIALPAPLAKHAAMELLSQELNADFAALRT HHHHHHHCCEEEEECCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHH LLVNVK HHHCCC >Mature Secondary Structure MKLYNIKENDEQVSFGQAVRQGLGRNQGLFFPAQLPKFDDIDALLAEDFVSRSSKILSAL CCCCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH IGDELPADKIRAMVDSAFQFAAPIAKVKEGVYALELFHGPTLAFKDFGGRFMAQSLAAVS HCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEHHHCCCHHHHHHHHHHC NGGKITILTATSGDTGAAVAHAFYGMPDINVVILYPKGKISPLQEKLFCTLGKNIHTVAI CCCEEEEEEECCCCCHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCEEEEEE NGDFDACQALVKQAFDDAELRQQIGLNSANSINISRLMAQICYYFEAAAQMSKAERENLV CCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEE ISVPSGNFGNLTAGLLAKALGLSVKRFIAATNANDTVPRYLETGRWEPKPTVATTSNAMD EECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCEEECCCCCC VSQPNNWPRIEELCQRMGWGLETLGKGAVSDEESAQAVQELYDLGYLCEPHGSIAYRVLE CCCCCCCHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHCCCEECCCCHHHHHHHH EQRQLQETGLFLCTAHPAKFKEVVDDILGTDIALPAPLAKHAAMELLSQELNADFAALRT HHHHHHHCCEEEEECCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHH LLVNVK HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]