Definition Vibrio cholerae O395 chromosome 2, complete sequence.
Accession NC_009457
Length 3,024,069

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The map label for this gene is 147673479

Identifier: 147673479

GI number: 147673479

Start: 372563

End: 375451

Strand: Direct

Name: 147673479

Synonym: VC0395_A0347

Alternate gene names: NA

Gene position: 372563-375451 (Clockwise)

Preceding gene: 147674617

Following gene: 147673162

Centisome position: 12.32

GC content: 32.71

Gene sequence:

>2889_bases
ATGTTTAACTTTTCTAATGCATTAGATAAGCTTACTGAAGATATTTATTCTAATGCTAATTTATATCGTTCAGATAATGT
TGTAAGACTCTATGCTGATCATAACTATACAGGTCACTATATAGATATTGAAAATTCGACGAAATTCCTACATGGATTTA
ATGATACACTTTCGTCTTGGACTATCCCACACGGCTGGTCTGTACGATTTTATGAACATGGTGACTATCAAGGACGTTAT
TGGACAAGAGATGCTTCTGGAAATGAATCAGGATTTAATGATGTAATTAGCTCTATTGAGATATTGAAAAAAACATCTGG
GATAAAAGGTAGCTTAATACGTAATGAGCTTGAATCATTAAAAAATAGCTACAGAGAAATAGATAAATTTCAAGTAATTG
TCGGTTATGAAAATGAAACACCAATTTATGCCCTTCCTTTAACTGATGAGCTTTTTGCTAAAGCTCAGCTGTACAGTTAT
GGATTAGATGCCAACTTTGTTGACAAACACTGGAAGTCATACCTAAAAAAAGGCCGCTTGTCTCTTATCCCCGGGGTTCG
TGTAGGGAAGGATATTCTTAAAAAGGATGCTGCTGCATTAGGAGGACATGTAACAACAAAAGGTGCACAAGATTTATGGA
GAAGAAAATACCAAGAAATCAGCCAAGTTATGTCAAAGTATATTGCAACTCTTATTTCATTTAAAGCAAAGCTAGAGGGA
AAAGAATCATGGGATATTCAATCTGAAAATAAAAATCGTTCAGTTAGATTTAATTTTGGATTCGGAATTACATATTATAA
TATGGGTAATAATGGTAAAGCCCATTCAAGATATGAAAATATTCCAACTCAAAGCTGGGTCATGACGGGTAAGGATATAA
GTTATTCGGTTACGACACCTGGTGATTTATTGAGCCTGTTCAGTCTTAATAATTTTAAAGTGATAGAACCTATCGATTTT
AATTCAGGCTCGAATAATTATCCACTTTATCAATTGATGAACTCCAATTACGCCGATAAGTGTTCATATTATCAAGATGG
ATGGTATCCTCGGTGGAATGTGTGTGATACAAAATTTATAACAAGAAATAAAAAATCATATAATACAAAAGACATCATGT
CATATGGATGGCAAGAGTTTCTAAATTTTAAAATGAACGATTTGAAGACTGTACAAACAGATAGAGATATAGCATATCAA
GTATTGATGGCGATTCTTCCTGTATGGGGAACTGTTGAAGATATTAAATCGGGTGATGCAGGAATGGCAACTCTTGGTGT
GTTAGGTGACGTAATGTTTTTTTTACCCATAGCAAAAAGTGTTTCTAGTATCGGAAAACTATCAGCTAAAGCTGCGTCGT
CTAAACTACTACCGAGAAATGTTAAGTTTGTTAGAAATGTCATTGGCCTAAACAAACAAGGTAAGTATTCATTAACATCA
TCGCAAGCTGATAGAGCTTTCTATAAATTAAAAATACAAGGAAAACTAAAGGAACTCCCTAAAGTTATATTAAATGAACT
TAATCCTATCGCAGGTTTGGATCAGCTCGTTGTTACAGGGACAAGTAAATTATATAAAAAATATTCATCGCGGGTTAGTA
TACCTAAAAAAAATATAATAGGTGATAACTCAGTTGTGTTTTACGATGATTTAAAGTTTAAATCAGAGGTGTTTTCAGTA
TCATATTTAGATGATGGTTATTTAATTATTAATGATCAATATCGAGCTGTTTATATTGATGGTAACTACTATAGGGTCGA
ATATGATCCAATACTACGTGCTAATTTCATTTATGAACAAAATAGTGGGAGAAGGATAGAAATTATTAAAGATAAAAATG
GCAATTGGTCTATTAAAGAAATTAATAATGGGATTTGTCCACTTTTTTCGTTAATGAATAATACTAAAGCATGTCATTTC
ACCAACATTGATGATGCATTAATAAGTATGGGATTTGACCCAAAAACCAGAACAGCATCAGGATTATTGGAGTTGATTAA
TGGTCGATATGGACCTGATATTAAAGAATACTTATTAAAATTAAATTCTTCGCTATCTCTTAATTATAATATCGATATAG
ATACCCTAAATTGGGTTTTCGATACTATAGAAAATTCTGGTATGTCTAGATATGCATTTACTCCATTTGTAAAAAATACT
GATGCCATCATGTATGATATGCTAGGTAAGTTTTATAATAATAACATGAGTATTAAACCTGTTTTTTTGAACAAATCGCA
GTACAAAAAATTAAAGAAAACTTTAGACTCTGATAAAGAATTAATTATAAATGTAATTTCAGAACAAAGGAAAATTAATC
TAAAGGAGGCACAACAGCTCTTCGATGAATTTTATACTTCTGTTACGAAAGATCCTATTTTTGGTTTGGATTCTATAACA
CACGATAGACCGGTTATTCATGTCGTCGGACACGGTGATGCTGGTGATGAAGTCATCTACCCTGGTGATGCAAGCCATTA
CTATTACGCTTTCGAGTTAGCTGATATGCTGAAAAATAAAGGATTAAAGCCGGATTCAATCATAAAACTTGACTTTTGTT
GGAGTGCTTGCTCTCTCAAACCAAGTGATTATTCAAAAACAGAAGTACTGACTAGTATGAATAAGGGGGATTACACTCCT
TTATTTGGTGACATTGATGATAGCTTTCTGGGGGAGTTTGCTAAAGAATTAACGGCAATGTACCCTACGTTCCGTGGACC
AATAATCGGATACGTAGGGACAGTATTAAACACAATTCAAGATAATGTGTTAACTTTAGCTAATACACAAGGTCGGTTTC
ATGCTGTAGAAATGAACTTTTCTGATGGTAAATTTTTTTTCAAGAAAGAGGATGCAGAAGTTATTTATGGGAGTTATAAA
AATAAATGA

Upstream 100 bases:

>100_bases
TCAACAATAATCTATCAAAAACGTTACTTCCTGAAGAGGTCGGTATTGGATCTGAGCCATTTATTATTGATGAATTATTG
GCAAAAATAATCAATTAACA

Downstream 100 bases:

>100_bases
GAAAATCGATATTGATTAGCTTGTGCCTTTTTTCTAGCATTACAAATGCCTGTCCAATTGGTGATATTCTAGAGTCTATG
GAATTACCATTAGAAATTGA

Product: putative inner membrane protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 962; Mature: 962

Protein sequence:

>962_residues
MFNFSNALDKLTEDIYSNANLYRSDNVVRLYADHNYTGHYIDIENSTKFLHGFNDTLSSWTIPHGWSVRFYEHGDYQGRY
WTRDASGNESGFNDVISSIEILKKTSGIKGSLIRNELESLKNSYREIDKFQVIVGYENETPIYALPLTDELFAKAQLYSY
GLDANFVDKHWKSYLKKGRLSLIPGVRVGKDILKKDAAALGGHVTTKGAQDLWRRKYQEISQVMSKYIATLISFKAKLEG
KESWDIQSENKNRSVRFNFGFGITYYNMGNNGKAHSRYENIPTQSWVMTGKDISYSVTTPGDLLSLFSLNNFKVIEPIDF
NSGSNNYPLYQLMNSNYADKCSYYQDGWYPRWNVCDTKFITRNKKSYNTKDIMSYGWQEFLNFKMNDLKTVQTDRDIAYQ
VLMAILPVWGTVEDIKSGDAGMATLGVLGDVMFFLPIAKSVSSIGKLSAKAASSKLLPRNVKFVRNVIGLNKQGKYSLTS
SQADRAFYKLKIQGKLKELPKVILNELNPIAGLDQLVVTGTSKLYKKYSSRVSIPKKNIIGDNSVVFYDDLKFKSEVFSV
SYLDDGYLIINDQYRAVYIDGNYYRVEYDPILRANFIYEQNSGRRIEIIKDKNGNWSIKEINNGICPLFSLMNNTKACHF
TNIDDALISMGFDPKTRTASGLLELINGRYGPDIKEYLLKLNSSLSLNYNIDIDTLNWVFDTIENSGMSRYAFTPFVKNT
DAIMYDMLGKFYNNNMSIKPVFLNKSQYKKLKKTLDSDKELIINVISEQRKINLKEAQQLFDEFYTSVTKDPIFGLDSIT
HDRPVIHVVGHGDAGDEVIYPGDASHYYYAFELADMLKNKGLKPDSIIKLDFCWSACSLKPSDYSKTEVLTSMNKGDYTP
LFGDIDDSFLGEFAKELTAMYPTFRGPIIGYVGTVLNTIQDNVLTLANTQGRFHAVEMNFSDGKFFFKKEDAEVIYGSYK
NK

Sequences:

>Translated_962_residues
MFNFSNALDKLTEDIYSNANLYRSDNVVRLYADHNYTGHYIDIENSTKFLHGFNDTLSSWTIPHGWSVRFYEHGDYQGRY
WTRDASGNESGFNDVISSIEILKKTSGIKGSLIRNELESLKNSYREIDKFQVIVGYENETPIYALPLTDELFAKAQLYSY
GLDANFVDKHWKSYLKKGRLSLIPGVRVGKDILKKDAAALGGHVTTKGAQDLWRRKYQEISQVMSKYIATLISFKAKLEG
KESWDIQSENKNRSVRFNFGFGITYYNMGNNGKAHSRYENIPTQSWVMTGKDISYSVTTPGDLLSLFSLNNFKVIEPIDF
NSGSNNYPLYQLMNSNYADKCSYYQDGWYPRWNVCDTKFITRNKKSYNTKDIMSYGWQEFLNFKMNDLKTVQTDRDIAYQ
VLMAILPVWGTVEDIKSGDAGMATLGVLGDVMFFLPIAKSVSSIGKLSAKAASSKLLPRNVKFVRNVIGLNKQGKYSLTS
SQADRAFYKLKIQGKLKELPKVILNELNPIAGLDQLVVTGTSKLYKKYSSRVSIPKKNIIGDNSVVFYDDLKFKSEVFSV
SYLDDGYLIINDQYRAVYIDGNYYRVEYDPILRANFIYEQNSGRRIEIIKDKNGNWSIKEINNGICPLFSLMNNTKACHF
TNIDDALISMGFDPKTRTASGLLELINGRYGPDIKEYLLKLNSSLSLNYNIDIDTLNWVFDTIENSGMSRYAFTPFVKNT
DAIMYDMLGKFYNNNMSIKPVFLNKSQYKKLKKTLDSDKELIINVISEQRKINLKEAQQLFDEFYTSVTKDPIFGLDSIT
HDRPVIHVVGHGDAGDEVIYPGDASHYYYAFELADMLKNKGLKPDSIIKLDFCWSACSLKPSDYSKTEVLTSMNKGDYTP
LFGDIDDSFLGEFAKELTAMYPTFRGPIIGYVGTVLNTIQDNVLTLANTQGRFHAVEMNFSDGKFFFKKEDAEVIYGSYK
NK
>Mature_962_residues
MFNFSNALDKLTEDIYSNANLYRSDNVVRLYADHNYTGHYIDIENSTKFLHGFNDTLSSWTIPHGWSVRFYEHGDYQGRY
WTRDASGNESGFNDVISSIEILKKTSGIKGSLIRNELESLKNSYREIDKFQVIVGYENETPIYALPLTDELFAKAQLYSY
GLDANFVDKHWKSYLKKGRLSLIPGVRVGKDILKKDAAALGGHVTTKGAQDLWRRKYQEISQVMSKYIATLISFKAKLEG
KESWDIQSENKNRSVRFNFGFGITYYNMGNNGKAHSRYENIPTQSWVMTGKDISYSVTTPGDLLSLFSLNNFKVIEPIDF
NSGSNNYPLYQLMNSNYADKCSYYQDGWYPRWNVCDTKFITRNKKSYNTKDIMSYGWQEFLNFKMNDLKTVQTDRDIAYQ
VLMAILPVWGTVEDIKSGDAGMATLGVLGDVMFFLPIAKSVSSIGKLSAKAASSKLLPRNVKFVRNVIGLNKQGKYSLTS
SQADRAFYKLKIQGKLKELPKVILNELNPIAGLDQLVVTGTSKLYKKYSSRVSIPKKNIIGDNSVVFYDDLKFKSEVFSV
SYLDDGYLIINDQYRAVYIDGNYYRVEYDPILRANFIYEQNSGRRIEIIKDKNGNWSIKEINNGICPLFSLMNNTKACHF
TNIDDALISMGFDPKTRTASGLLELINGRYGPDIKEYLLKLNSSLSLNYNIDIDTLNWVFDTIENSGMSRYAFTPFVKNT
DAIMYDMLGKFYNNNMSIKPVFLNKSQYKKLKKTLDSDKELIINVISEQRKINLKEAQQLFDEFYTSVTKDPIFGLDSIT
HDRPVIHVVGHGDAGDEVIYPGDASHYYYAFELADMLKNKGLKPDSIIKLDFCWSACSLKPSDYSKTEVLTSMNKGDYTP
LFGDIDDSFLGEFAKELTAMYPTFRGPIIGYVGTVLNTIQDNVLTLANTQGRFHAVEMNFSDGKFFFKKEDAEVIYGSYK
NK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 109731; Mature: 109731

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNFSNALDKLTEDIYSNANLYRSDNVVRLYADHNYTGHYIDIENSTKFLHGFNDTLSSW
CCCHHHHHHHHHHHHHCCCCEEECCCEEEEEECCCCCCCEEEECCCCCEECCCCHHHHCC
TIPHGWSVRFYEHGDYQGRYWTRDASGNESGFNDVISSIEILKKTSGIKGSLIRNELESL
CCCCCCEEEEEECCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
KNSYREIDKFQVIVGYENETPIYALPLTDELFAKAQLYSYGLDANFVDKHWKSYLKKGRL
HHHHHHHCEEEEEEEECCCCCEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCE
SLIPGVRVGKDILKKDAAALGGHVTTKGAQDLWRRKYQEISQVMSKYIATLISFKAKLEG
EECCCCHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KESWDIQSENKNRSVRFNFGFGITYYNMGNNGKAHSRYENIPTQSWVMTGKDISYSVTTP
CCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCHHHCCCCCCEEEECCCCEEEECCC
GDLLSLFSLNNFKVIEPIDFNSGSNNYPLYQLMNSNYADKCSYYQDGWYPRWNVCDTKFI
HHHHHHHCCCCEEEEEEEECCCCCCCCCCCEEECCCCCHHCCCCCCCCCCCCCCCCCHHE
TRNKKSYNTKDIMSYGWQEFLNFKMNDLKTVQTDRDIAYQVLMAILPVWGTVEDIKSGDA
ECCCCCCCHHHHHHHCHHHHHCCCCCCCEEECCCHHHHHHHHHHHHCCCCCHHHHCCCCC
GMATLGVLGDVMFFLPIAKSVSSIGKLSAKAASSKLLPRNVKFVRNVIGLNKQGKYSLTS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCEEECC
SQADRAFYKLKIQGKLKELPKVILNELNPIAGLDQLVVTGTSKLYKKYSSRVSIPKKNII
CCCCCEEEEEEECCHHHHHHHHHHHHCCCCCCCCHHEEECCHHHHHHHHHCCCCCCCCCC
GDNSVVFYDDLKFKSEVFSVSYLDDGYLIINDQYRAVYIDGNYYRVEYDPILRANFIYEQ
CCCCEEEEECCCCCCCEEEEEEECCCEEEEECCEEEEEECCCEEEEEECCEEEEEEEEEC
NSGRRIEIIKDKNGNWSIKEINNGICPLFSLMNNTKACHFTNIDDALISMGFDPKTRTAS
CCCCEEEEEECCCCCEEEEECCCCHHHHHHHHCCCCEEEECCCCHHHHHCCCCCCCHHHH
GLLELINGRYGPDIKEYLLKLNSSLSLNYNIDIDTLNWVFDTIENSGMSRYAFTPFVKNT
HHHHHHCCCCCCCHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHCCCCCEEEECCCCCCC
DAIMYDMLGKFYNNNMSIKPVFLNKSQYKKLKKTLDSDKELIINVISEQRKINLKEAQQL
HHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHH
FDEFYTSVTKDPIFGLDSITHDRPVIHVVGHGDAGDEVIYPGDASHYYYAFELADMLKNK
HHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEECCCCCCEEEHHHHHHHHHHC
GLKPDSIIKLDFCWSACSLKPSDYSKTEVLTSMNKGDYTPLFGDIDDSFLGEFAKELTAM
CCCCCCEEEEEEEEHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH
YPTFRGPIIGYVGTVLNTIQDNVLTLANTQGRFHAVEMNFSDGKFFFKKEDAEVIYGSYK
CCCCCCCHHHHHHHHHHHHHHCEEEEECCCCCEEEEEEECCCCEEEEEECCCEEEECCCC
NK
CC
>Mature Secondary Structure
MFNFSNALDKLTEDIYSNANLYRSDNVVRLYADHNYTGHYIDIENSTKFLHGFNDTLSSW
CCCHHHHHHHHHHHHHCCCCEEECCCEEEEEECCCCCCCEEEECCCCCEECCCCHHHHCC
TIPHGWSVRFYEHGDYQGRYWTRDASGNESGFNDVISSIEILKKTSGIKGSLIRNELESL
CCCCCCEEEEEECCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
KNSYREIDKFQVIVGYENETPIYALPLTDELFAKAQLYSYGLDANFVDKHWKSYLKKGRL
HHHHHHHCEEEEEEEECCCCCEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCE
SLIPGVRVGKDILKKDAAALGGHVTTKGAQDLWRRKYQEISQVMSKYIATLISFKAKLEG
EECCCCHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KESWDIQSENKNRSVRFNFGFGITYYNMGNNGKAHSRYENIPTQSWVMTGKDISYSVTTP
CCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCHHHCCCCCCEEEECCCCEEEECCC
GDLLSLFSLNNFKVIEPIDFNSGSNNYPLYQLMNSNYADKCSYYQDGWYPRWNVCDTKFI
HHHHHHHCCCCEEEEEEEECCCCCCCCCCCEEECCCCCHHCCCCCCCCCCCCCCCCCHHE
TRNKKSYNTKDIMSYGWQEFLNFKMNDLKTVQTDRDIAYQVLMAILPVWGTVEDIKSGDA
ECCCCCCCHHHHHHHCHHHHHCCCCCCCEEECCCHHHHHHHHHHHHCCCCCHHHHCCCCC
GMATLGVLGDVMFFLPIAKSVSSIGKLSAKAASSKLLPRNVKFVRNVIGLNKQGKYSLTS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCEEECC
SQADRAFYKLKIQGKLKELPKVILNELNPIAGLDQLVVTGTSKLYKKYSSRVSIPKKNII
CCCCCEEEEEEECCHHHHHHHHHHHHCCCCCCCCHHEEECCHHHHHHHHHCCCCCCCCCC
GDNSVVFYDDLKFKSEVFSVSYLDDGYLIINDQYRAVYIDGNYYRVEYDPILRANFIYEQ
CCCCEEEEECCCCCCCEEEEEEECCCEEEEECCEEEEEECCCEEEEEECCEEEEEEEEEC
NSGRRIEIIKDKNGNWSIKEINNGICPLFSLMNNTKACHFTNIDDALISMGFDPKTRTAS
CCCCEEEEEECCCCCEEEEECCCCHHHHHHHHCCCCEEEECCCCHHHHHCCCCCCCHHHH
GLLELINGRYGPDIKEYLLKLNSSLSLNYNIDIDTLNWVFDTIENSGMSRYAFTPFVKNT
HHHHHHCCCCCCCHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHCCCCCEEEECCCCCCC
DAIMYDMLGKFYNNNMSIKPVFLNKSQYKKLKKTLDSDKELIINVISEQRKINLKEAQQL
HHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHH
FDEFYTSVTKDPIFGLDSITHDRPVIHVVGHGDAGDEVIYPGDASHYYYAFELADMLKNK
HHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEECCCCCCEEEHHHHHHHHHHC
GLKPDSIIKLDFCWSACSLKPSDYSKTEVLTSMNKGDYTPLFGDIDDSFLGEFAKELTAM
CCCCCCEEEEEEEEHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH
YPTFRGPIIGYVGTVLNTIQDNVLTLANTQGRFHAVEMNFSDGKFFFKKEDAEVIYGSYK
CCCCCCCHHHHHHHHHHHHHHCEEEEECCCCCEEEEEEECCCCEEEEEECCCEEEECCCC
NK
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA