| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147673162
Identifier: 147673162
GI number: 147673162
Start: 375448
End: 376386
Strand: Direct
Name: 147673162
Synonym: VC0395_A0348
Alternate gene names: NA
Gene position: 375448-376386 (Clockwise)
Preceding gene: 147673479
Following gene: 147673729
Centisome position: 12.42
GC content: 35.89
Gene sequence:
>939_bases ATGAGAAAATCGATATTGATTAGCTTGTGCCTTTTTTCTAGCATTACAAATGCCTGTCCAATTGGTGATATTCTAGAGTC TATGGAATTACCATTAGAAATTGAAACATCCCATGAGTTGCGCGCAGAATTGGCTAAGTTAACTGGTGGAACTTATTATA GAGATTATTTATATCGATTAATTGATGAATTAAACCCATTTTTTAAAACTGACCAGATGCTAACAGCAGAGCATACCTAC TGGGCAAAACAATTGCTTGACTCTGGTAAGCTTAAAAATTTTACAAGTGCACTTGGTTATGTGAAAATAAACAGAAACTC TATGATACCAGAGTTTGAAGGTAGATATCTTGTTGCAAAAGAACTCTCAAAATTAGACCCAGCGCTTTTAAAATCAGGAT GGAATACGGTTCATGAAATAAAGCTTGTGGTGACACATGATAATGTCACTACTTATTGGGAACATTTAAAAGGACAGCCT GTTCGCGGACATGAAGCTGGCATAACGTGGGATTCTATTCCAGGAGCAGGATCACCAGAAGGTTTAACAGAATTAGTGAT TGCTCTTCAAAAAAATTCGGATGGTAAATGGGTTATACCAACAGGTAATCATGGTTCGAAAAATCTAGTTATTCATGAGT TTGGTCATACTCTAGATCGTGTAGTGGGTACATATTTTACTGGTAAGCCCTACAGTCAAAATCCGAGTTTTTATCAAGCT TGGCATAATGATTATCAACTAGGGAAGATAAAGGAACACTACTTCTTGCAACCTGAGAATAACTATGCTGTTGCATTAGA GGAATCATTTGCTGAAGGTCTATCGAAACTTTATGGGATAGACAATATACAATCAACTTATGACTGGCCCTATATCTCCG CTTATTTCTATGACCAGTTTAAGAAAACAATACAAGAACAAAATCAGGGTTATAAATAA
Upstream 100 bases:
>100_bases CACAAGGTCGGTTTCATGCTGTAGAAATGAACTTTTCTGATGGTAAATTTTTTTTCAAGAAAGAGGATGCAGAAGTTATT TATGGGAGTTATAAAAATAA
Downstream 100 bases:
>100_bases TTTAAACTAAACTTCTAAACGGATTTTTTTTATTTAATTTGGTTTGTTTTTAATAGTTTGTATAATAGCGGTGACACTAA AGTAGTGTTTATATTTGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MRKSILISLCLFSSITNACPIGDILESMELPLEIETSHELRAELAKLTGGTYYRDYLYRLIDELNPFFKTDQMLTAEHTY WAKQLLDSGKLKNFTSALGYVKINRNSMIPEFEGRYLVAKELSKLDPALLKSGWNTVHEIKLVVTHDNVTTYWEHLKGQP VRGHEAGITWDSIPGAGSPEGLTELVIALQKNSDGKWVIPTGNHGSKNLVIHEFGHTLDRVVGTYFTGKPYSQNPSFYQA WHNDYQLGKIKEHYFLQPENNYAVALEESFAEGLSKLYGIDNIQSTYDWPYISAYFYDQFKKTIQEQNQGYK
Sequences:
>Translated_312_residues MRKSILISLCLFSSITNACPIGDILESMELPLEIETSHELRAELAKLTGGTYYRDYLYRLIDELNPFFKTDQMLTAEHTY WAKQLLDSGKLKNFTSALGYVKINRNSMIPEFEGRYLVAKELSKLDPALLKSGWNTVHEIKLVVTHDNVTTYWEHLKGQP VRGHEAGITWDSIPGAGSPEGLTELVIALQKNSDGKWVIPTGNHGSKNLVIHEFGHTLDRVVGTYFTGKPYSQNPSFYQA WHNDYQLGKIKEHYFLQPENNYAVALEESFAEGLSKLYGIDNIQSTYDWPYISAYFYDQFKKTIQEQNQGYK >Mature_312_residues MRKSILISLCLFSSITNACPIGDILESMELPLEIETSHELRAELAKLTGGTYYRDYLYRLIDELNPFFKTDQMLTAEHTY WAKQLLDSGKLKNFTSALGYVKINRNSMIPEFEGRYLVAKELSKLDPALLKSGWNTVHEIKLVVTHDNVTTYWEHLKGQP VRGHEAGITWDSIPGAGSPEGLTELVIALQKNSDGKWVIPTGNHGSKNLVIHEFGHTLDRVVGTYFTGKPYSQNPSFYQA WHNDYQLGKIKEHYFLQPENNYAVALEESFAEGLSKLYGIDNIQSTYDWPYISAYFYDQFKKTIQEQNQGYK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35695; Mature: 35695
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKSILISLCLFSSITNACPIGDILESMELPLEIETSHELRAELAKLTGGTYYRDYLYRL CCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEECCCHHHHHHHHHHCCCHHHHHHHHHH IDELNPFFKTDQMLTAEHTYWAKQLLDSGKLKNFTSALGYVKINRNSMIPEFEGRYLVAK HHHCCHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCEEEECCCCCCCCCCCCEEHHH ELSKLDPALLKSGWNTVHEIKLVVTHDNVTTYWEHLKGQPVRGHEAGITWDSIPGAGSPE HHHHCCHHHHHCCCCCEEEEEEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCH GLTELVIALQKNSDGKWVIPTGNHGSKNLVIHEFGHTLDRVVGTYFTGKPYSQNPSFYQA HHHHHHHHHEECCCCCEEEECCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCHHHH WHNDYQLGKIKEHYFLQPENNYAVALEESFAEGLSKLYGIDNIQSTYDWPYISAYFYDQF HCCCCCCCCCCHHEEECCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH KKTIQEQNQGYK HHHHHHHCCCCC >Mature Secondary Structure MRKSILISLCLFSSITNACPIGDILESMELPLEIETSHELRAELAKLTGGTYYRDYLYRL CCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEECCCHHHHHHHHHHCCCHHHHHHHHHH IDELNPFFKTDQMLTAEHTYWAKQLLDSGKLKNFTSALGYVKINRNSMIPEFEGRYLVAK HHHCCHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCEEEECCCCCCCCCCCCEEHHH ELSKLDPALLKSGWNTVHEIKLVVTHDNVTTYWEHLKGQPVRGHEAGITWDSIPGAGSPE HHHHCCHHHHHCCCCCEEEEEEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCH GLTELVIALQKNSDGKWVIPTGNHGSKNLVIHEFGHTLDRVVGTYFTGKPYSQNPSFYQA HHHHHHHHHEECCCCCEEEECCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCHHHH WHNDYQLGKIKEHYFLQPENNYAVALEESFAEGLSKLYGIDNIQSTYDWPYISAYFYDQF HCCCCCCCCCCHHEEECCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH KKTIQEQNQGYK HHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA