| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147674617
Identifier: 147674617
GI number: 147674617
Start: 370851
End: 372560
Strand: Direct
Name: 147674617
Synonym: VC0395_A0346
Alternate gene names: NA
Gene position: 370851-372560 (Clockwise)
Preceding gene: 147675654
Following gene: 147673479
Centisome position: 12.26
GC content: 30.23
Gene sequence:
>1710_bases ATGTTCAATAAAAAAATTACAATAACTTCAACTGGTATTACGTTGTCTATTTTTTCCTTTATGGCTAAAGCTGATCCTAA AATTAATTTCGCAGTGGATTATTTCTCTTATGGTAGTAATGGAAGATGTATGGTTGCTATGGAGATCGAAAAAAGTAATT TAAATGAAATATATAATATAATTAATAAAAATCACTTTGATATCGATTTTGAAGTTTTACTGTATGAGAAAGATAAAAAT GGAAAAATTGAGAAGCCTCATGGTACAGAGATGGTTAAATTCAAATTTAATGAATTTGATAACCTTGTTCATGATCATGT TATTGTCATGTCAAAAATGGAACTTCCATATTCATGGTGGCATGAATGTAAAGTCTTAAGTGTTAATTTATCAGATAAGA AATATGCTAAAGTTACAATATATGACGATTTTAATGGCGACGTTTCATTTAGAAATATAGTTGAAAATAATAAGATTTCC AGTTTTGATTTCTTTTCTGATATAGTAAACATGGCATTCGCCTATAGAATGAAAGATGAAAAACCAACAGAGAATGAGAT CCTCCAGAACATATCCAAAATGAAAAGTTATAATAATGGAAAGTCAGGGAATGAATCACTAAATAGAAAAATTATTGGAT ATACAAACACTATATCTTTAGGAGATAGTGGTATAAATGGTTCTATAGGTTTTAATATATCTGAAGATTTCATTAAATTA CGAACAAAAGATAAGATCAATAATTTTATAAAAGAAAAAATCGTAAAACCTGCAGTAGAAGTTGGTATCGTTGATCGTAA ATTTCAAGAATCAAAGTATATTGATGAATTAAGACAGAGACTACTAAAAAGTTTAAATCAAGATCATTACTTTGAATATG GTTCAGAGAAAAATTTGCAATTATCATTGGTAATGATGTTCTCAGACTTGTACAGTCAGCCTATATTATCCTACGGAAAA ACGATACCTGCATACAGCGATTCCTTTTTTAGTGATTTATGGGAGTCAATGTTAAGTGGATTCATCAATAGTATTGAACC TGTGAAATTATATGAACATGAGTCATATCATGGGCATTCGATATCATTAAACATGGATAGTGAATTTTTGCATGGCTTTA ATGATATTGCTTCATCAATAAAAATTCCGAAAGGGTGGCAAGTTACTTTATTTGAACATGGCGGATTTACTGGTTCTTCT ATTGTAGCTAATAGTGATATTAAGGCATTAGGAGAGAAGAATCTGAATGATACGGTAAGTTCTTTGATGGTTGAGTATGT CGGTGATGATCCTTCCGAACTCTATGACATGTTATTGTTGACCATCAATTATGGTAACCTCTCAGGTATAGATTTTTCTC GCGAAATTTTTAATAAAAATAAGGATATTATAGTTGACTATAAAAAGGGTACCATTAACCATAGAGGTATTACTGGTGGA TTTTTGGGGAAGACTTTTGCTCAAGTTGCAGCCATTTTGTATCAAAAATCTATTGAGGAGCTCAGCTATATTGAGTTACT GAGTACTAAAAATGCATTAGAAAGTATTGGTATTGACACCGTATACCCTTATGGCAGTATGGATAATATAAAAGCAAGTC TATTCTTGAGGATCAACAATAATCTATCAAAAACGTTACTTCCTGAAGAGGTCGGTATTGGATCTGAGCCATTTATTATT GATGAATTATTGGCAAAAATAATCAATTAA
Upstream 100 bases:
>100_bases TTTTTTGATGACTGTGGTTTGTTCATTCATAGTTAGATTGAAAAATAAAATACTAACTATATGGTGTAATCATATAGTTA GTAAGGATTAAGGACTATTC
Downstream 100 bases:
>100_bases CAATGTTTAACTTTTCTAATGCATTAGATAAGCTTACTGAAGATATTTATTCTAATGCTAATTTATATCGTTCAGATAAT GTTGTAAGACTCTATGCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 569; Mature: 569
Protein sequence:
>569_residues MFNKKITITSTGITLSIFSFMAKADPKINFAVDYFSYGSNGRCMVAMEIEKSNLNEIYNIINKNHFDIDFEVLLYEKDKN GKIEKPHGTEMVKFKFNEFDNLVHDHVIVMSKMELPYSWWHECKVLSVNLSDKKYAKVTIYDDFNGDVSFRNIVENNKIS SFDFFSDIVNMAFAYRMKDEKPTENEILQNISKMKSYNNGKSGNESLNRKIIGYTNTISLGDSGINGSIGFNISEDFIKL RTKDKINNFIKEKIVKPAVEVGIVDRKFQESKYIDELRQRLLKSLNQDHYFEYGSEKNLQLSLVMMFSDLYSQPILSYGK TIPAYSDSFFSDLWESMLSGFINSIEPVKLYEHESYHGHSISLNMDSEFLHGFNDIASSIKIPKGWQVTLFEHGGFTGSS IVANSDIKALGEKNLNDTVSSLMVEYVGDDPSELYDMLLLTINYGNLSGIDFSREIFNKNKDIIVDYKKGTINHRGITGG FLGKTFAQVAAILYQKSIEELSYIELLSTKNALESIGIDTVYPYGSMDNIKASLFLRINNNLSKTLLPEEVGIGSEPFII DELLAKIIN
Sequences:
>Translated_569_residues MFNKKITITSTGITLSIFSFMAKADPKINFAVDYFSYGSNGRCMVAMEIEKSNLNEIYNIINKNHFDIDFEVLLYEKDKN GKIEKPHGTEMVKFKFNEFDNLVHDHVIVMSKMELPYSWWHECKVLSVNLSDKKYAKVTIYDDFNGDVSFRNIVENNKIS SFDFFSDIVNMAFAYRMKDEKPTENEILQNISKMKSYNNGKSGNESLNRKIIGYTNTISLGDSGINGSIGFNISEDFIKL RTKDKINNFIKEKIVKPAVEVGIVDRKFQESKYIDELRQRLLKSLNQDHYFEYGSEKNLQLSLVMMFSDLYSQPILSYGK TIPAYSDSFFSDLWESMLSGFINSIEPVKLYEHESYHGHSISLNMDSEFLHGFNDIASSIKIPKGWQVTLFEHGGFTGSS IVANSDIKALGEKNLNDTVSSLMVEYVGDDPSELYDMLLLTINYGNLSGIDFSREIFNKNKDIIVDYKKGTINHRGITGG FLGKTFAQVAAILYQKSIEELSYIELLSTKNALESIGIDTVYPYGSMDNIKASLFLRINNNLSKTLLPEEVGIGSEPFII DELLAKIIN >Mature_569_residues MFNKKITITSTGITLSIFSFMAKADPKINFAVDYFSYGSNGRCMVAMEIEKSNLNEIYNIINKNHFDIDFEVLLYEKDKN GKIEKPHGTEMVKFKFNEFDNLVHDHVIVMSKMELPYSWWHECKVLSVNLSDKKYAKVTIYDDFNGDVSFRNIVENNKIS SFDFFSDIVNMAFAYRMKDEKPTENEILQNISKMKSYNNGKSGNESLNRKIIGYTNTISLGDSGINGSIGFNISEDFIKL RTKDKINNFIKEKIVKPAVEVGIVDRKFQESKYIDELRQRLLKSLNQDHYFEYGSEKNLQLSLVMMFSDLYSQPILSYGK TIPAYSDSFFSDLWESMLSGFINSIEPVKLYEHESYHGHSISLNMDSEFLHGFNDIASSIKIPKGWQVTLFEHGGFTGSS IVANSDIKALGEKNLNDTVSSLMVEYVGDDPSELYDMLLLTINYGNLSGIDFSREIFNKNKDIIVDYKKGTINHRGITGG FLGKTFAQVAAILYQKSIEELSYIELLSTKNALESIGIDTVYPYGSMDNIKASLFLRINNNLSKTLLPEEVGIGSEPFII DELLAKIIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64756; Mature: 64756
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: PS50915 CRYSTALLIN_BETA_GAMMA L=rr
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNKKITITSTGITLSIFSFMAKADPKINFAVDYFSYGSNGRCMVAMEIEKSNLNEIYNI CCCCEEEEEECCHHHHHHHHHHHCCCCEEEEEEEEEECCCCEEEEEEEECCCCHHHHHHH INKNHFDIDFEVLLYEKDKNGKIEKPHGTEMVKFKFNEFDNLVHDHVIVMSKMELPYSWW HCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEEHHHHHHHHHHHEEEEEECCCCHHHC HECKVLSVNLSDKKYAKVTIYDDFNGDVSFRNIVENNKISSFDFFSDIVNMAFAYRMKDE CCCEEEEEECCCCCEEEEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCC KPTENEILQNISKMKSYNNGKSGNESLNRKIIGYTNTISLGDSGINGSIGFNISEDFIKL CCCHHHHHHHHHHHHHCCCCCCCCHHHCCEEEEEEEEEECCCCCCCCCCCCCCCHHHHHH RTKDKINNFIKEKIVKPAVEVGIVDRKFQESKYIDELRQRLLKSLNQDHYFEYGSEKNLQ HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCE LSLVMMFSDLYSQPILSYGKTIPAYSDSFFSDLWESMLSGFINSIEPVKLYEHESYHGHS EEHHHHHHHHHHCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCE ISLNMDSEFLHGFNDIASSIKIPKGWQVTLFEHGGFTGSSIVANSDIKALGEKNLNDTVS EEEECCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEECCCHHHHCCCCCHHHHH SLMVEYVGDDPSELYDMLLLTINYGNLSGIDFSREIFNKNKDIIVDYKKGTINHRGITGG HHHHHHCCCCHHHHHHHHEEEEECCCCCCCCCHHHHHCCCCCEEEEECCCCCCCCCCCCH FLGKTFAQVAAILYQKSIEELSYIELLSTKNALESIGIDTVYPYGSMDNIKASLFLRINN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECC NLSKTLLPEEVGIGSEPFIIDELLAKIIN CCCHHCCCHHCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MFNKKITITSTGITLSIFSFMAKADPKINFAVDYFSYGSNGRCMVAMEIEKSNLNEIYNI CCCCEEEEEECCHHHHHHHHHHHCCCCEEEEEEEEEECCCCEEEEEEEECCCCHHHHHHH INKNHFDIDFEVLLYEKDKNGKIEKPHGTEMVKFKFNEFDNLVHDHVIVMSKMELPYSWW HCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEEEHHHHHHHHHHHEEEEEECCCCHHHC HECKVLSVNLSDKKYAKVTIYDDFNGDVSFRNIVENNKISSFDFFSDIVNMAFAYRMKDE CCCEEEEEECCCCCEEEEEEEECCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCC KPTENEILQNISKMKSYNNGKSGNESLNRKIIGYTNTISLGDSGINGSIGFNISEDFIKL CCCHHHHHHHHHHHHHCCCCCCCCHHHCCEEEEEEEEEECCCCCCCCCCCCCCCHHHHHH RTKDKINNFIKEKIVKPAVEVGIVDRKFQESKYIDELRQRLLKSLNQDHYFEYGSEKNLQ HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCE LSLVMMFSDLYSQPILSYGKTIPAYSDSFFSDLWESMLSGFINSIEPVKLYEHESYHGHS EEHHHHHHHHHHCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCE ISLNMDSEFLHGFNDIASSIKIPKGWQVTLFEHGGFTGSSIVANSDIKALGEKNLNDTVS EEEECCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEECCCHHHHCCCCCHHHHH SLMVEYVGDDPSELYDMLLLTINYGNLSGIDFSREIFNKNKDIIVDYKKGTINHRGITGG HHHHHHCCCCHHHHHHHHEEEEECCCCCCCCCHHHHHCCCCCEEEEECCCCCCCCCCCCH FLGKTFAQVAAILYQKSIEELSYIELLSTKNALESIGIDTVYPYGSMDNIKASLFLRINN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECC NLSKTLLPEEVGIGSEPFIIDELLAKIIN CCCHHCCCHHCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA