Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146343879
Identifier: 146343879
GI number: 146343879
Start: 7442682
End: 7444013
Strand: Reverse
Name: 146343879
Synonym: BRADO7130
Alternate gene names: NA
Gene position: 7444013-7442682 (Counterclockwise)
Preceding gene: 146343880
Following gene: 146343877
Centisome position: 99.83
GC content: 65.09
Gene sequence:
>1332_bases ATGACCCCACGCTTCAGCACGATGGCCCGCACCGGCGTTGCCGCCGCAGCGATCCTGTCCCAGGCGGCGATCGTGCCGGC CCAGGCGTTCTGCGGCTTCTATGTCGCACAGGCCGATTCCAAGCTGTTCAACCAGTCATCCAAGGTCGTGCTGTCGCGCG ATGGCCAGCAGACCTCGATCACGATGGCCAGCGACTTCGAGGGCGACGTGAAGGAATTCGCTGTGGTCGTTCCCGTGCCG ACCTTCATCGAGCGCAAGCAGATCGGCGTCGTCGAGCCGAAGACGATCGAGCATCTCGACAAATACACTGCGCCGCGGCT GGTCGAATACCACGACGACGATCCCTGCGCGCCGGTTATCGTTGCAGCGCGGGCAATGCCGGCGGCGCCGATGATGGCGG GGGCTCCGCGCCTGGGATTCAAGTCGGATTATGGCGTCACCATCGAGGCAAGCTACGATGTCGCCGAATACGACGTGTTG ATCCTGTCGGCGCAGGAAAGCGACGGCCTGACGCGCTGGCTGACCGACAACAACTACCGTATTCCCGAGGGGGCCGAGGC CGTGCTCGGCAGCTACATCAAGCAGGGCATGCGGTTCTTCGTGGCCAAGGTCAATGTCGAGCGGATGAAGGGGCTCGACA CCGGCCAGCTCCGGCCGCTGCAGGTCCGCTACCAGAGCGCCAAGTTCATGGTCCCGTTGCGGCTCGGCACCGTCAATGCC AGGGGTCCGCAGGATCTCATCATCTACGCGCTGACGCGGAGCGGCCGCATCGAGGCAGCCAACTATCGGACGGTGAAGAT CCCGTCGAATATCGATGTGCCGCTGTACGTCAAGAACGAGTTCGGCCCGTTCTACAAGGCGCTGTTCGAACGCGCCGTCG CGCGCGAGAACATGCAGGCGGTGTTCGTCGAATATGCCTGGGACATGGCGTGGTGCGACCCCTGCGCCGCCGATCCGATG AGCAACAAGGAGCTGGTCGAGCTCGGCGCGCGCTGGATCGGCAGCGACGAGGCCACGGCCTTCAGCGCCGGCCGTCGCGC CGGCGGCGGCTCCGAGGCCTATGTGACCCGGCTGCACGTCCGCTACGATGCGAAATCGTTTCCCGAGGACATCGCCTTCA CCGAGACCAAGGACCGCGGCAATTTCCAGGGCCGCTACGTGCAGCGCCATCCCTGGCGCGGCGAGGCGAAATGCGACGCG GCGAAGTCCTACCAGGAGAACCTGTCCGCACGCTTCGCCAAGGAGGCGACCGATCTGGCTGCCTTGACCGGCTGGTCGCG CAGCGAGATCGTCGCCCGGATGGAGCAAAGCGGCGAAGCCGTCACGAAGTAG
Upstream 100 bases:
>100_bases TCGCGCTGATCGCGCTGTCGCCACTGACCCTGGTGCTCGACCGGCTGATCCCGGCCGCCCGCTTTTCCTGGCGTTCGCCC GTTTCCGAAGGAGTATCGCG
Downstream 100 bases:
>100_bases CGCACAGCCCGCGCTCACTCCCGGTAGGACGAGATCTCGATCAGGCTGCCGTCGGGATCGCGGCAATACACCGAGCGCAG GGTGCCGCGGGCGCCCTGCT
Product: putative signal peptide
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 443; Mature: 442
Protein sequence:
>443_residues MTPRFSTMARTGVAAAAILSQAAIVPAQAFCGFYVAQADSKLFNQSSKVVLSRDGQQTSITMASDFEGDVKEFAVVVPVP TFIERKQIGVVEPKTIEHLDKYTAPRLVEYHDDDPCAPVIVAARAMPAAPMMAGAPRLGFKSDYGVTIEASYDVAEYDVL ILSAQESDGLTRWLTDNNYRIPEGAEAVLGSYIKQGMRFFVAKVNVERMKGLDTGQLRPLQVRYQSAKFMVPLRLGTVNA RGPQDLIIYALTRSGRIEAANYRTVKIPSNIDVPLYVKNEFGPFYKALFERAVARENMQAVFVEYAWDMAWCDPCAADPM SNKELVELGARWIGSDEATAFSAGRRAGGGSEAYVTRLHVRYDAKSFPEDIAFTETKDRGNFQGRYVQRHPWRGEAKCDA AKSYQENLSARFAKEATDLAALTGWSRSEIVARMEQSGEAVTK
Sequences:
>Translated_443_residues MTPRFSTMARTGVAAAAILSQAAIVPAQAFCGFYVAQADSKLFNQSSKVVLSRDGQQTSITMASDFEGDVKEFAVVVPVP TFIERKQIGVVEPKTIEHLDKYTAPRLVEYHDDDPCAPVIVAARAMPAAPMMAGAPRLGFKSDYGVTIEASYDVAEYDVL ILSAQESDGLTRWLTDNNYRIPEGAEAVLGSYIKQGMRFFVAKVNVERMKGLDTGQLRPLQVRYQSAKFMVPLRLGTVNA RGPQDLIIYALTRSGRIEAANYRTVKIPSNIDVPLYVKNEFGPFYKALFERAVARENMQAVFVEYAWDMAWCDPCAADPM SNKELVELGARWIGSDEATAFSAGRRAGGGSEAYVTRLHVRYDAKSFPEDIAFTETKDRGNFQGRYVQRHPWRGEAKCDA AKSYQENLSARFAKEATDLAALTGWSRSEIVARMEQSGEAVTK >Mature_442_residues TPRFSTMARTGVAAAAILSQAAIVPAQAFCGFYVAQADSKLFNQSSKVVLSRDGQQTSITMASDFEGDVKEFAVVVPVPT FIERKQIGVVEPKTIEHLDKYTAPRLVEYHDDDPCAPVIVAARAMPAAPMMAGAPRLGFKSDYGVTIEASYDVAEYDVLI LSAQESDGLTRWLTDNNYRIPEGAEAVLGSYIKQGMRFFVAKVNVERMKGLDTGQLRPLQVRYQSAKFMVPLRLGTVNAR GPQDLIIYALTRSGRIEAANYRTVKIPSNIDVPLYVKNEFGPFYKALFERAVARENMQAVFVEYAWDMAWCDPCAADPMS NKELVELGARWIGSDEATAFSAGRRAGGGSEAYVTRLHVRYDAKSFPEDIAFTETKDRGNFQGRYVQRHPWRGEAKCDAA KSYQENLSARFAKEATDLAALTGWSRSEIVARMEQSGEAVTK
Specific function: Unknown
COG id: COG4402
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49006; Mature: 48875
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: PS01319 RBFA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPRFSTMARTGVAAAAILSQAAIVPAQAFCGFYVAQADSKLFNQSSKVVLSRDGQQTSI CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEE TMASDFEGDVKEFAVVVPVPTFIERKQIGVVEPKTIEHLDKYTAPRLVEYHDDDPCAPVI EEECCCCCCHHHEEEEECCCHHHHHCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCHHH VAARAMPAAPMMAGAPRLGFKSDYGVTIEASYDVAEYDVLILSAQESDGLTRWLTDNNYR HHHHCCCCCCHHCCCCCCCCCCCCCEEEEECCCEEEEEEEEEEECCCCCCEEEECCCCEE IPEGAEAVLGSYIKQGMRFFVAKVNVERMKGLDTGQLRPLQVRYQSAKFMVPLRLGTVNA CCCHHHHHHHHHHHHHHHHHHHEECHHHHCCCCCCCCCEEEEEECCCEEEEEEEEEECCC RGPQDLIIYALTRSGRIEAANYRTVKIPSNIDVPLYVKNEFGPFYKALFERAVARENMQA CCCCEEEEEEEECCCCEEECCEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHE VFVEYAWDMAWCDPCAADPMSNKELVELGARWIGSDEATAFSAGRRAGGGSEAYVTRLHV EEEEHHCCHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCEEEEEEEE RYDAKSFPEDIAFTETKDRGNFQGRYVQRHPWRGEAKCDAAKSYQENLSARFAKEATDLA EECCCCCCCCCCEECCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ALTGWSRSEIVARMEQSGEAVTK HHCCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure TPRFSTMARTGVAAAAILSQAAIVPAQAFCGFYVAQADSKLFNQSSKVVLSRDGQQTSI CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEE TMASDFEGDVKEFAVVVPVPTFIERKQIGVVEPKTIEHLDKYTAPRLVEYHDDDPCAPVI EEECCCCCCHHHEEEEECCCHHHHHCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCHHH VAARAMPAAPMMAGAPRLGFKSDYGVTIEASYDVAEYDVLILSAQESDGLTRWLTDNNYR HHHHCCCCCCHHCCCCCCCCCCCCCEEEEECCCEEEEEEEEEEECCCCCCEEEECCCCEE IPEGAEAVLGSYIKQGMRFFVAKVNVERMKGLDTGQLRPLQVRYQSAKFMVPLRLGTVNA CCCHHHHHHHHHHHHHHHHHHHEECHHHHCCCCCCCCCEEEEEECCCEEEEEEEEEECCC RGPQDLIIYALTRSGRIEAANYRTVKIPSNIDVPLYVKNEFGPFYKALFERAVARENMQA CCCCEEEEEEEECCCCEEECCEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHE VFVEYAWDMAWCDPCAADPMSNKELVELGARWIGSDEATAFSAGRRAGGGSEAYVTRLHV EEEEHHCCHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCEEEEEEEE RYDAKSFPEDIAFTETKDRGNFQGRYVQRHPWRGEAKCDAAKSYQENLSARFAKEATDLA EECCCCCCCCCCEECCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ALTGWSRSEIVARMEQSGEAVTK HHCCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA