Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146343880
Identifier: 146343880
GI number: 146343880
Start: 7444010
End: 7444834
Strand: Reverse
Name: 146343880
Synonym: BRADO7131
Alternate gene names: NA
Gene position: 7444834-7444010 (Counterclockwise)
Preceding gene: 146343882
Following gene: 146343879
Centisome position: 99.84
GC content: 64.97
Gene sequence:
>825_bases ATGCAGGCCCTGGCCCGACCATGGCGGCTGCCCGATGCCCGCTATTTCCAGATCGCGGCATTGGCCACGCTGCTGGCGAT CAATTTCGCCATGATCGATTTTGGCGCACGCCCGGCAGCGAGCGTGATCGCCGTCACGACGGCCCTGGTTACGCAGGTGA TCGGCTGCCGTCTCAGCGGAACGCCGCTCGATCTCAGGTCGCCGCTCATCACCGGCCTGTCGCTCAGCCTGCTGCTGCGG GCGGACGCGCTCTGGCTGCATGCGGCGGCCGCCGCCATCGCGATCGCCTCGAAATTCGTGCTGCGCATCGACGGCAAGCA CCTCTTCAATCCCGCCGGCTTTGCGATCGTGGTGCTGCTGTTCACATCGCATGGCGTATGGATCTCGCCCGGTCAATGGG GCACGGAGGTCTGGTTCGCGAGCCTGGCTGGCTTCTTCGCGATCCTGGTGCTGAGCGCATCGCGCCGGGTGGATATCGCG ATCTATTTTTTCGCCAGCCATGCCGCGCTCTTGCTGTTGCGCGCGCTGTGGCTCGGCGATCCCCTGGCGATTCCGCTGCA CCAATTGCAGAGCGGTTCGCTGCTGATCTTCACCTTCTTCATGATCTCCGATCCGCGCACCACGCCGGACTCGCACGCCG GCCGGTTGCTGTTCGCGATGACCATCGCGGTGACCGCGCACTATTTGACGTTCGTCATGCAGATGCGTCCGGCGCTCTAC GTCGCGCTGATCGCGCTGTCGCCACTGACCCTGGTGCTCGACCGGCTGATCCCGGCCGCCCGCTTTTCCTGGCGTTCGCC CGTTTCCGAAGGAGTATCGCGATGA
Upstream 100 bases:
>100_bases TCCACCTTTTGCCACTCACCGTCGCCGCGAGCAAATCGGATTGAACCGGTTGCCGATTGGCGGCGACGAATGGCGCGGCA AGACACGCCCGGAGGTTCGC
Downstream 100 bases:
>100_bases CCCCACGCTTCAGCACGATGGCCCGCACCGGCGTTGCCGCCGCAGCGATCCTGTCCCAGGCGGCGATCGTGCCGGCCCAG GCGTTCTGCGGCTTCTATGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MQALARPWRLPDARYFQIAALATLLAINFAMIDFGARPAASVIAVTTALVTQVIGCRLSGTPLDLRSPLITGLSLSLLLR ADALWLHAAAAAIAIASKFVLRIDGKHLFNPAGFAIVVLLFTSHGVWISPGQWGTEVWFASLAGFFAILVLSASRRVDIA IYFFASHAALLLLRALWLGDPLAIPLHQLQSGSLLIFTFFMISDPRTTPDSHAGRLLFAMTIAVTAHYLTFVMQMRPALY VALIALSPLTLVLDRLIPAARFSWRSPVSEGVSR
Sequences:
>Translated_274_residues MQALARPWRLPDARYFQIAALATLLAINFAMIDFGARPAASVIAVTTALVTQVIGCRLSGTPLDLRSPLITGLSLSLLLR ADALWLHAAAAAIAIASKFVLRIDGKHLFNPAGFAIVVLLFTSHGVWISPGQWGTEVWFASLAGFFAILVLSASRRVDIA IYFFASHAALLLLRALWLGDPLAIPLHQLQSGSLLIFTFFMISDPRTTPDSHAGRLLFAMTIAVTAHYLTFVMQMRPALY VALIALSPLTLVLDRLIPAARFSWRSPVSEGVSR >Mature_274_residues MQALARPWRLPDARYFQIAALATLLAINFAMIDFGARPAASVIAVTTALVTQVIGCRLSGTPLDLRSPLITGLSLSLLLR ADALWLHAAAAAIAIASKFVLRIDGKHLFNPAGFAIVVLLFTSHGVWISPGQWGTEVWFASLAGFFAILVLSASRRVDIA IYFFASHAALLLLRALWLGDPLAIPLHQLQSGSLLIFTFFMISDPRTTPDSHAGRLLFAMTIAVTAHYLTFVMQMRPALY VALIALSPLTLVLDRLIPAARFSWRSPVSEGVSR
Specific function: Unknown
COG id: COG1805
COG function: function code C; Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrB
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29774; Mature: 29774
Theoretical pI: Translated: 11.20; Mature: 11.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQALARPWRLPDARYFQIAALATLLAINFAMIDFGARPAASVIAVTTALVTQVIGCRLSG CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCC TPLDLRSPLITGLSLSLLLRADALWLHAAAAAIAIASKFVLRIDGKHLFNPAGFAIVVLL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHCCCHHHHHHHHH FTSHGVWISPGQWGTEVWFASLAGFFAILVLSASRRVDIAIYFFASHAALLLLRALWLGD HHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHCCC PLAIPLHQLQSGSLLIFTFFMISDPRTTPDSHAGRLLFAMTIAVTAHYLTFVMQMRPALY CCCCHHHHCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VALIALSPLTLVLDRLIPAARFSWRSPVSEGVSR HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCC >Mature Secondary Structure MQALARPWRLPDARYFQIAALATLLAINFAMIDFGARPAASVIAVTTALVTQVIGCRLSG CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCC TPLDLRSPLITGLSLSLLLRADALWLHAAAAAIAIASKFVLRIDGKHLFNPAGFAIVVLL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHCCCHHHHHHHHH FTSHGVWISPGQWGTEVWFASLAGFFAILVLSASRRVDIAIYFFASHAALLLLRALWLGD HHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHCCC PLAIPLHQLQSGSLLIFTFFMISDPRTTPDSHAGRLLFAMTIAVTAHYLTFVMQMRPALY CCCCHHHHCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VALIALSPLTLVLDRLIPAARFSWRSPVSEGVSR HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA