Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
---|---|
Accession | NC_009445 |
Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is 146343877
Identifier: 146343877
GI number: 146343877
Start: 7441170
End: 7442144
Strand: Reverse
Name: 146343877
Synonym: BRADO7128
Alternate gene names: NA
Gene position: 7442144-7441170 (Counterclockwise)
Preceding gene: 146343879
Following gene: 146343876
Centisome position: 99.81
GC content: 63.08
Gene sequence:
>975_bases ATGATTTCACGCCGTGCCGCGCTTGGCTTGATCGCCACCGCCGTTCCGTCCGTCGCCGCCCTTCGCAGGGCCTCCGCCGC CGACTATCCGAGCCGCCCGGTCCGCTTTGTCGTCGGCTATCCGCCGGGCGGCGCGACCGACATCCTGGCACGGCTGATCG GACAGCGGCTTTCGGAGACGTTCGGCCAGCAGTTCGTGGTCGAGAACAAGCCCGGCGCCGGCAATAATATCGGCACCGAG ACGGTCGTGAACGCCCAGCCCGACGGCTACACGGTGTTGCTGGTCAATCCCGCCAACTACATCAACACGAGCCTCTACAC GAACCTGAAGTTCAATTTCGTTCGCGACGTCGCGCCGGTGGCCTCGTTCAATCGCGTGCCCAACGTGATGACGGTCAACA GCGATATCAAGGCGAAGACCGTCGCCGAGTTCATCGCCTACCTCAAGGAGAATCCCGGCAAGGTCAACATGGCGTCGTCC GGCAATGGCACCTCAGTGCATCTCTCGGGTGAGATGTTCATGGCGATGACCGGCACCAAGATGCAGCATGTGCCGTATCG CGGCGCTGCGCCCGCGATCACCGACATGCTCGGCGGCCAGGTCCAGGTGATCTTCGACAACATGCCGTCGATCATTCAGC ACATTCGCTCCGGCTCCCTGCGCGCCCTTGGCGTCACGACCCAGGAACGTTCCGCGCAATTGCCGGATGTCCAGGCGATC GCCGAGACCGTGCCCGGCTACGAGGCGAGCGCCTTGTTCGGCATGGGAGCGCCCAAGAACACGCCAAAGGAGATCGTCGA GAAACTCAACAAACAGGTCAACGCTGTTCTGGCCGAGCCCGAGATCACGAAGCGGCTGATCGATCTCGGCGGAGAGCCGT TGATCCAGTCGCCGGAGCAGTTCGGCGCGCAAATCGCGGCCGAGACGGACAAGTGGAAGAAGGTCGTCGAGTTCGCCGGC CTGAAGCTGGATTGA
Upstream 100 bases:
>100_bases CTGATCAAGACATCGACCTCGCGACGATCGCGCGGTTGGGCTACAATCGACACCAGCGCTTCGTTCACGGGCGCTCAACG ATACATAACCGAGGAAACGC
Downstream 100 bases:
>100_bases GGCGCAGCACCCGCACGTCCCCACCGCGATGACTTGCCGCATCCGCGACACCTCATCGCCTTGCTTGGTGATCCAGTCCG CGGGTTTGTCGTTTTTTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MISRRAALGLIATAVPSVAALRRASAADYPSRPVRFVVGYPPGGATDILARLIGQRLSETFGQQFVVENKPGAGNNIGTE TVVNAQPDGYTVLLVNPANYINTSLYTNLKFNFVRDVAPVASFNRVPNVMTVNSDIKAKTVAEFIAYLKENPGKVNMASS GNGTSVHLSGEMFMAMTGTKMQHVPYRGAAPAITDMLGGQVQVIFDNMPSIIQHIRSGSLRALGVTTQERSAQLPDVQAI AETVPGYEASALFGMGAPKNTPKEIVEKLNKQVNAVLAEPEITKRLIDLGGEPLIQSPEQFGAQIAAETDKWKKVVEFAG LKLD
Sequences:
>Translated_324_residues MISRRAALGLIATAVPSVAALRRASAADYPSRPVRFVVGYPPGGATDILARLIGQRLSETFGQQFVVENKPGAGNNIGTE TVVNAQPDGYTVLLVNPANYINTSLYTNLKFNFVRDVAPVASFNRVPNVMTVNSDIKAKTVAEFIAYLKENPGKVNMASS GNGTSVHLSGEMFMAMTGTKMQHVPYRGAAPAITDMLGGQVQVIFDNMPSIIQHIRSGSLRALGVTTQERSAQLPDVQAI AETVPGYEASALFGMGAPKNTPKEIVEKLNKQVNAVLAEPEITKRLIDLGGEPLIQSPEQFGAQIAAETDKWKKVVEFAG LKLD >Mature_324_residues MISRRAALGLIATAVPSVAALRRASAADYPSRPVRFVVGYPPGGATDILARLIGQRLSETFGQQFVVENKPGAGNNIGTE TVVNAQPDGYTVLLVNPANYINTSLYTNLKFNFVRDVAPVASFNRVPNVMTVNSDIKAKTVAEFIAYLKENPGKVNMASS GNGTSVHLSGEMFMAMTGTKMQHVPYRGAAPAITDMLGGQVQVIFDNMPSIIQHIRSGSLRALGVTTQERSAQLPDVQAI AETVPGYEASALFGMGAPKNTPKEIVEKLNKQVNAVLAEPEITKRLIDLGGEPLIQSPEQFGAQIAAETDKWKKVVEFAG LKLD
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 34682; Mature: 34682
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISRRAALGLIATAVPSVAALRRASAADYPSRPVRFVVGYPPGGATDILARLIGQRLSET CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH FGQQFVVENKPGAGNNIGTETVVNAQPDGYTVLLVNPANYINTSLYTNLKFNFVRDVAPV HCCEEEEECCCCCCCCCCCCCEEECCCCCEEEEEECCHHHHCHHEEECEEHHHHHHHHHH ASFNRVPNVMTVNSDIKAKTVAEFIAYLKENPGKVNMASSGNGTSVHLSGEMFMAMTGTK HHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCEEEECCCEEEEEECCC MQHVPYRGAAPAITDMLGGQVQVIFDNMPSIIQHIRSGSLRALGVTTQERSAQLPDVQAI EECCCCCCCCHHHHHHHCCEEEEEECCHHHHHHHHHCCCEEEEECCCHHHCCCCCHHHHH AETVPGYEASALFGMGAPKNTPKEIVEKLNKQVNAVLAEPEITKRLIDLGGEPLIQSPEQ HHHCCCCCCHHEEECCCCCCCHHHHHHHHHHHHHHEECCHHHHHHHHHCCCCCCCCCHHH FGAQIAAETDKWKKVVEFAGLKLD HCCEECCCHHHHHHHHHHCCCCCC >Mature Secondary Structure MISRRAALGLIATAVPSVAALRRASAADYPSRPVRFVVGYPPGGATDILARLIGQRLSET CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH FGQQFVVENKPGAGNNIGTETVVNAQPDGYTVLLVNPANYINTSLYTNLKFNFVRDVAPV HCCEEEEECCCCCCCCCCCCCEEECCCCCEEEEEECCHHHHCHHEEECEEHHHHHHHHHH ASFNRVPNVMTVNSDIKAKTVAEFIAYLKENPGKVNMASSGNGTSVHLSGEMFMAMTGTK HHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCEEEECCCEEEEEECCC MQHVPYRGAAPAITDMLGGQVQVIFDNMPSIIQHIRSGSLRALGVTTQERSAQLPDVQAI EECCCCCCCCHHHHHHHCCEEEEEECCHHHHHHHHHCCCEEEEECCCHHHCCCCCHHHHH AETVPGYEASALFGMGAPKNTPKEIVEKLNKQVNAVLAEPEITKRLIDLGGEPLIQSPEQ HHHCCCCCCHHEEECCCCCCCHHHHHHHHHHHHHHEECCHHHHHHHHHCCCCCCCCCHHH FGAQIAAETDKWKKVVEFAGLKLD HCCEECCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2013566 [H]