Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

Click here to switch to the map view.

The map label for this gene is 146343732

Identifier: 146343732

GI number: 146343732

Start: 7272021

End: 7272944

Strand: Direct

Name: 146343732

Synonym: BRADO6979

Alternate gene names: NA

Gene position: 7272021-7272944 (Clockwise)

Preceding gene: 146343727

Following gene: 146343734

Centisome position: 97.52

GC content: 67.64

Gene sequence:

>924_bases
GTGTCGCCGCCGGTGTCGCTCCGGTTCGATCGCAGCGTGGTTGACCTTGCTCCGCGCCGGTGGCTCGATGCCGCCGGGGC
CGATCAACGGCACCTCAGCGAACGGGACGACATCATGGGGAACGCCGCCGAGATCTACGCGCTGCGCTATGCGACGATGG
GGTCGCGCAGCCTGCACATGAACTTCCTGCAGCCCGATCCGCACGACACGACGGCGCAGGACCTCGATTACTTCGTCTGG
CTGATTCGCATCGACGGCCGCGACATCCTGGTCGATACCGGCTTCAATGCCACGGAGGCGCAGGCCCGCAACCGCAAGCT
GACCCGAAATCCAGTCGATGCGCTCGAGGCGTTCGGCGTGCGCGCCGCCGACATCCGCGACATCATCGTCACGCATCTGC
ACTACGACCATGCCGGCAATCTCGACCGCTTCCCGAACGCGCGCTTCCACCTGCAGGAGCGCGAGATGGCCTATGCGACG
GGCCGCTGCATGTGCAACGGCCTGTTGCGCCACCCGTTCTCGGTCGAACACGTCACCACCATGGTGCGGCACGTCTATGG
CGAGCGCGTCGCGTTTCACGCCGGCGACGGCGAGATCGCGCCGGGAATCACCGTGCACCGGGTCGGCGGCCATTCCGACG
GGCTGCAGGTGGTGCGGGTCGAGACCGCGCGCGGGCCGGTCGTGCTGGCCTCCGACGCCGCGCACTACTACGCCAACCTG
CAGCGCCGCAGCCCGTTTCCGATCGTCTACAATGTCGGCGACATGGCCCAGGGCTGGGAGACCATCGAGCGCCTCGCAGG
CCATCCGGACCGGTTCATCCCCGGCCACGATCCGCTGGTGACCGAGCTGTACCCGCGGGTGAATGACGCGGCCGATGCGT
ATGCGCTGCACGTGGTGCCCAAGCGGTCGTTTGCGACGTCGTAA

Upstream 100 bases:

>100_bases
AGCGGCCATCGCCGGCGAAAGCATCTCGCGATCCCCGCTTCGACGACATGACCGACCATGCAGCGATACCGGCGTCTCGT
AATGTGAGGAGCCTCACGCT

Downstream 100 bases:

>100_bases
TTTTTGCCAGGCCGACGCCTCGATGAAGGCGCGGCCGCCCGTCACATCAACGATCCCGTAGGGTGGGCAAGGGCGCGTTG
CGCAGTTCACTCTGCGCCCA

Product: putative Zn-dependent hydrolase

Products: NA

Alternate protein names: Zn-Dependent Hydrolase; Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Superfamily; Beta-Lactamase-Like; Metallo-Beta-Lactamase Family Protein; Hydrolase; Metallo-Beta-Lactamase; Beta-Lactamase-Like Protein; Metallo-Beta-Lactamase Superfamily Protein; Beta-Lactamase-Like Protein YtnP; Zn-Dependent Hydrolases Including Glyoxylases; Beta-Lactamase Class B

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MSPPVSLRFDRSVVDLAPRRWLDAAGADQRHLSERDDIMGNAAEIYALRYATMGSRSLHMNFLQPDPHDTTAQDLDYFVW
LIRIDGRDILVDTGFNATEAQARNRKLTRNPVDALEAFGVRAADIRDIIVTHLHYDHAGNLDRFPNARFHLQEREMAYAT
GRCMCNGLLRHPFSVEHVTTMVRHVYGERVAFHAGDGEIAPGITVHRVGGHSDGLQVVRVETARGPVVLASDAAHYYANL
QRRSPFPIVYNVGDMAQGWETIERLAGHPDRFIPGHDPLVTELYPRVNDAADAYALHVVPKRSFATS

Sequences:

>Translated_307_residues
MSPPVSLRFDRSVVDLAPRRWLDAAGADQRHLSERDDIMGNAAEIYALRYATMGSRSLHMNFLQPDPHDTTAQDLDYFVW
LIRIDGRDILVDTGFNATEAQARNRKLTRNPVDALEAFGVRAADIRDIIVTHLHYDHAGNLDRFPNARFHLQEREMAYAT
GRCMCNGLLRHPFSVEHVTTMVRHVYGERVAFHAGDGEIAPGITVHRVGGHSDGLQVVRVETARGPVVLASDAAHYYANL
QRRSPFPIVYNVGDMAQGWETIERLAGHPDRFIPGHDPLVTELYPRVNDAADAYALHVVPKRSFATS
>Mature_306_residues
SPPVSLRFDRSVVDLAPRRWLDAAGADQRHLSERDDIMGNAAEIYALRYATMGSRSLHMNFLQPDPHDTTAQDLDYFVWL
IRIDGRDILVDTGFNATEAQARNRKLTRNPVDALEAFGVRAADIRDIIVTHLHYDHAGNLDRFPNARFHLQEREMAYATG
RCMCNGLLRHPFSVEHVTTMVRHVYGERVAFHAGDGEIAPGITVHRVGGHSDGLQVVRVETARGPVVLASDAAHYYANLQ
RRSPFPIVYNVGDMAQGWETIERLAGHPDRFIPGHDPLVTELYPRVNDAADAYALHVVPKRSFATS

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34437; Mature: 34306

Theoretical pI: Translated: 6.76; Mature: 6.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPPVSLRFDRSVVDLAPRRWLDAAGADQRHLSERDDIMGNAAEIYALRYATMGSRSLHM
CCCCCCEEECCHHHHHCHHHHHHCCCCCHHHHHHHHHHCCCHHHEEEEEEHHCCCCEEEE
NFLQPDPHDTTAQDLDYFVWLIRIDGRDILVDTGFNATEAQARNRKLTRNPVDALEAFGV
EECCCCCCCCCHHHHEEEEEEEEECCCEEEEECCCCCHHHHHHCCCCCCCHHHHHHHHCC
RAADIRDIIVTHLHYDHAGNLDRFPNARFHLQEREMAYATGRCMCNGLLRHPFSVEHVTT
CHHHHHHHHHHHEECCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
MVRHVYGERVAFHAGDGEIAPGITVHRVGGHSDGLQVVRVETARGPVVLASDAAHYYANL
HHHHHHCCEEEEECCCCCCCCCEEEEECCCCCCCEEEEEEEECCCCEEEECCCHHHHHHH
QRRSPFPIVYNVGDMAQGWETIERLAGHPDRFIPGHDPLVTELYPRVNDAADAYALHVVP
HCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCEEEEEEEE
KRSFATS
CCCCCCC
>Mature Secondary Structure 
SPPVSLRFDRSVVDLAPRRWLDAAGADQRHLSERDDIMGNAAEIYALRYATMGSRSLHM
CCCCCEEECCHHHHHCHHHHHHCCCCCHHHHHHHHHHCCCHHHEEEEEEHHCCCCEEEE
NFLQPDPHDTTAQDLDYFVWLIRIDGRDILVDTGFNATEAQARNRKLTRNPVDALEAFGV
EECCCCCCCCCHHHHEEEEEEEEECCCEEEEECCCCCHHHHHHCCCCCCCHHHHHHHHCC
RAADIRDIIVTHLHYDHAGNLDRFPNARFHLQEREMAYATGRCMCNGLLRHPFSVEHVTT
CHHHHHHHHHHHEECCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
MVRHVYGERVAFHAGDGEIAPGITVHRVGGHSDGLQVVRVETARGPVVLASDAAHYYANL
HHHHHHCCEEEEECCCCCCCCCEEEEECCCCCCCEEEEEEEECCCCEEEECCCHHHHHHH
QRRSPFPIVYNVGDMAQGWETIERLAGHPDRFIPGHDPLVTELYPRVNDAADAYALHVVP
HCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCEEEEEEEE
KRSFATS
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA