Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is metY [H]
Identifier: 146343669
GI number: 146343669
Start: 7182105
End: 7183403
Strand: Direct
Name: metY [H]
Synonym: BRADO6912
Alternate gene names: 146343669
Gene position: 7182105-7183403 (Clockwise)
Preceding gene: 146343668
Following gene: 146343670
Centisome position: 96.32
GC content: 65.59
Gene sequence:
>1299_bases ATGCGCAACGAGACGATTGCAATCCACGCCGGCTACGAGCCCGAGGGCACGACCAAGGCCGTTGCGGTCCCGATCTATCA GACCGCCGCCTATGCGTTCGACAGTGCCGACCACGGCGCCGCCCTGTTCAATCTCGAAGTCGAAGGCTACCGTTACAGCC GCATCTCCAATCCCACGACGGCCGTGCTCGAGAAGCGTGTCGCCGAGCTTGAAGGCGGTGTCGGCGCGCTCGCCGTCGGC ACCGGCCAGGCCGCGCTGCATTTCGCGTTCGTCAATCTCGCCGATGGCGGCGGCAACATCGTCTCGGTGCCGCAGCTTTA TGGCACGACCCACACGTTGCTCGGCCACATTCTGCCGCGCCAGGGCATCACCGGCCGCTTTGCCGAGAGCGACCAGCCCG ACGCGATCGAACGCCTGATCGACGCGAACACCAAGGCCGTGTTCGCCGAGACGATCGGCAATCCGGCCGGCAATGTGTGC GACATCGAGGCGCTGGCAAAGGTCGCGCATCGCAATGGCGTGCCGCTGATCGTGGACAACACCGTCGCAACGCCGATCCT GCTGCGGCCGTTCGACTACGGCGCCGACATCGCCGTGCACTCGCTGACCAAATTTCTCGGCGGCCACGGCACCACGCTCG GCGGCATGCTGGTCGACAGCGGCAACTTCCCTTGGAAGGATCACGCCGATCGCTTCCCGGCCTTCAGCCAGCCCGACACC TCCTATCACGGCATGGTCTACACCGACCATTTCGGCCGCAGCGCCTATATCCAGCGGGCCCGCAGCGTTTATCAGCGCAC GATGGGCGCGGTGCTGTCGCCGTTCAACGCCTTCCTGCTGCTGCAGGGCATCGAGACGGTGGCGCTGCGCATGGAGCGTC ACGTCGAGAACGCGCGCAAGGTCGCCGAATTTCTCCACAGGGATTCGCGCGTCGCGTGGGTCAACTACGCGGGCTTTCCC GACAGTCCGTATTATCCGCTGGTGCAGAAATATCTCGACGGCCGCGCCTCCTCGCTGTTCACGTTCGGGATCAAGGGCGG CCTGGAAGCCGGCAAGGCGTTCTACGACGCACTCAAGCTGATCACGCGGCTGGTCAATATCGGCGATGCCAAGTCGCTCG CCTGCCATCCGGCGTCGACGACGCACCGGCAGATGCCGCCGGAGGACCAGCGCAAGGCCGGCGTGCCGCCGGAAGCCATC CGGCTGTCGATCGGCATCGAGCATATCGACGACATCATCGAAGATCTCGACCAGGCGCTGGCCCTGGCCTGCCCGCGTCA GCTGGACGCGGCGGAGTAG
Upstream 100 bases:
>100_bases CGCGAATTATGGACCGCTTTACGCCTACACTCCTACAACATCGGTACTCGCGGATGACGTGCAGACCGCTTCGTCGATCG AAGCGGCACGGAGATTGCCG
Downstream 100 bases:
>100_bases AGCGATCAGCCGATGACCCTGCTGTTCGACGGAGATCGCAGGATCAAGAGCCCTGCTCTCGCGCCCGCCGGCGGCGACCG TCGCGCGCGCGACCCGATCG
Product: O-acetylhomoserine aminocarboxypropyltransferase
Products: NA
Alternate protein names: L-methioninase [H]
Number of amino acids: Translated: 432; Mature: 432
Protein sequence:
>432_residues MRNETIAIHAGYEPEGTTKAVAVPIYQTAAYAFDSADHGAALFNLEVEGYRYSRISNPTTAVLEKRVAELEGGVGALAVG TGQAALHFAFVNLADGGGNIVSVPQLYGTTHTLLGHILPRQGITGRFAESDQPDAIERLIDANTKAVFAETIGNPAGNVC DIEALAKVAHRNGVPLIVDNTVATPILLRPFDYGADIAVHSLTKFLGGHGTTLGGMLVDSGNFPWKDHADRFPAFSQPDT SYHGMVYTDHFGRSAYIQRARSVYQRTMGAVLSPFNAFLLLQGIETVALRMERHVENARKVAEFLHRDSRVAWVNYAGFP DSPYYPLVQKYLDGRASSLFTFGIKGGLEAGKAFYDALKLITRLVNIGDAKSLACHPASTTHRQMPPEDQRKAGVPPEAI RLSIGIEHIDDIIEDLDQALALACPRQLDAAE
Sequences:
>Translated_432_residues MRNETIAIHAGYEPEGTTKAVAVPIYQTAAYAFDSADHGAALFNLEVEGYRYSRISNPTTAVLEKRVAELEGGVGALAVG TGQAALHFAFVNLADGGGNIVSVPQLYGTTHTLLGHILPRQGITGRFAESDQPDAIERLIDANTKAVFAETIGNPAGNVC DIEALAKVAHRNGVPLIVDNTVATPILLRPFDYGADIAVHSLTKFLGGHGTTLGGMLVDSGNFPWKDHADRFPAFSQPDT SYHGMVYTDHFGRSAYIQRARSVYQRTMGAVLSPFNAFLLLQGIETVALRMERHVENARKVAEFLHRDSRVAWVNYAGFP DSPYYPLVQKYLDGRASSLFTFGIKGGLEAGKAFYDALKLITRLVNIGDAKSLACHPASTTHRQMPPEDQRKAGVPPEAI RLSIGIEHIDDIIEDLDQALALACPRQLDAAE >Mature_432_residues MRNETIAIHAGYEPEGTTKAVAVPIYQTAAYAFDSADHGAALFNLEVEGYRYSRISNPTTAVLEKRVAELEGGVGALAVG TGQAALHFAFVNLADGGGNIVSVPQLYGTTHTLLGHILPRQGITGRFAESDQPDAIERLIDANTKAVFAETIGNPAGNVC DIEALAKVAHRNGVPLIVDNTVATPILLRPFDYGADIAVHSLTKFLGGHGTTLGGMLVDSGNFPWKDHADRFPAFSQPDT SYHGMVYTDHFGRSAYIQRARSVYQRTMGAVLSPFNAFLLLQGIETVALRMERHVENARKVAEFLHRDSRVAWVNYAGFP DSPYYPLVQKYLDGRASSLFTFGIKGGLEAGKAFYDALKLITRLVNIGDAKSLACHPASTTHRQMPPEDQRKAGVPPEAI RLSIGIEHIDDIIEDLDQALALACPRQLDAAE
Specific function: Methionine biosynthesis; second step. [C]
COG id: COG2873
COG function: function code E; O-acetylhomoserine sulfhydrylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the trans-sulfuration enzymes family [H]
Homologues:
Organism=Homo sapiens, GI21361334, Length=423, Percent_Identity=33.806146572104, Blast_Score=189, Evalue=3e-48, Organism=Homo sapiens, GI299473759, Length=423, Percent_Identity=31.9148936170213, Blast_Score=162, Evalue=7e-40, Organism=Homo sapiens, GI25453487, Length=422, Percent_Identity=29.6208530805687, Blast_Score=137, Evalue=2e-32, Organism=Escherichia coli, GI1790375, Length=417, Percent_Identity=28.0575539568345, Blast_Score=162, Evalue=5e-41, Organism=Escherichia coli, GI1789383, Length=424, Percent_Identity=25.9433962264151, Blast_Score=120, Evalue=2e-28, Organism=Caenorhabditis elegans, GI71980708, Length=414, Percent_Identity=30.9178743961353, Blast_Score=195, Evalue=3e-50, Organism=Caenorhabditis elegans, GI17538055, Length=427, Percent_Identity=32.7868852459016, Blast_Score=193, Evalue=1e-49, Organism=Caenorhabditis elegans, GI17560056, Length=425, Percent_Identity=33.8823529411765, Blast_Score=187, Evalue=1e-47, Organism=Saccharomyces cerevisiae, GI6323333, Length=430, Percent_Identity=46.5116279069767, Blast_Score=353, Evalue=4e-98, Organism=Saccharomyces cerevisiae, GI6319307, Length=381, Percent_Identity=33.5958005249344, Blast_Score=188, Evalue=2e-48, Organism=Saccharomyces cerevisiae, GI6321254, Length=444, Percent_Identity=23.1981981981982, Blast_Score=108, Evalue=2e-24, Organism=Saccharomyces cerevisiae, GI6321170, Length=339, Percent_Identity=26.5486725663717, Blast_Score=100, Evalue=6e-22, Organism=Saccharomyces cerevisiae, GI6321904, Length=429, Percent_Identity=26.5734265734266, Blast_Score=93, Evalue=6e-20, Organism=Drosophila melanogaster, GI19922554, Length=423, Percent_Identity=32.387706855792, Blast_Score=202, Evalue=3e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000277 - InterPro: IPR006237 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF01053 Cys_Met_Meta_PP [H]
EC number: =4.4.1.11 [H]
Molecular weight: Translated: 46766; Mature: 46766
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: PS00868 CYS_MET_METAB_PP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNETIAIHAGYEPEGTTKAVAVPIYQTAAYAFDSADHGAALFNLEVEGYRYSRISNPTT CCCCEEEEECCCCCCCCCCEEEEEHHHHHHHHCCCCCCCEEEEEEEECCEEEECCCCCHH AVLEKRVAELEGGVGALAVGTGQAALHFAFVNLADGGGNIVSVPQLYGTTHTLLGHILPR HHHHHHHHHHCCCCEEEEECCCCCEEEEEEEEEECCCCCEEECHHHHCCHHHHHHHHHCC QGITGRFAESDQPDAIERLIDANTKAVFAETIGNPAGNVCDIEALAKVAHRNGVPLIVDN CCCCCCCCCCCCHHHHHHHHCCCCCEEEHHHHCCCCCCEECHHHHHHHHHCCCCCEEECC TVATPILLRPFDYGADIAVHSLTKFLGGHGTTLGGMLVDSGNFPWKDHADRFPAFSQPDT CCCCCEEEECCCCCCHHHHHHHHHHHCCCCCEECCEEEECCCCCCCCCCCCCCCCCCCCC SYHGMVYTDHFGRSAYIQRARSVYQRTMGAVLSPFNAFLLLQGIETVALRMERHVENARK CCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAEFLHRDSRVAWVNYAGFPDSPYYPLVQKYLDGRASSLFTFGIKGGLEAGKAFYDALKL HHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHCCCCHHEEEEECCCCHHHHHHHHHHHHH ITRLVNIGDAKSLACHPASTTHRQMPPEDQRKAGVPPEAIRLSIGIEHIDDIIEDLDQAL HHHHHCCCCCCCEEECCCCCCCCCCCCCHHHHCCCCHHHEEEEECHHHHHHHHHHHHHHH ALACPRQLDAAE HHHCCCCCCCCC >Mature Secondary Structure MRNETIAIHAGYEPEGTTKAVAVPIYQTAAYAFDSADHGAALFNLEVEGYRYSRISNPTT CCCCEEEEECCCCCCCCCCEEEEEHHHHHHHHCCCCCCCEEEEEEEECCEEEECCCCCHH AVLEKRVAELEGGVGALAVGTGQAALHFAFVNLADGGGNIVSVPQLYGTTHTLLGHILPR HHHHHHHHHHCCCCEEEEECCCCCEEEEEEEEEECCCCCEEECHHHHCCHHHHHHHHHCC QGITGRFAESDQPDAIERLIDANTKAVFAETIGNPAGNVCDIEALAKVAHRNGVPLIVDN CCCCCCCCCCCCHHHHHHHHCCCCCEEEHHHHCCCCCCEECHHHHHHHHHCCCCCEEECC TVATPILLRPFDYGADIAVHSLTKFLGGHGTTLGGMLVDSGNFPWKDHADRFPAFSQPDT CCCCCEEEECCCCCCHHHHHHHHHHHCCCCCEECCEEEECCCCCCCCCCCCCCCCCCCCC SYHGMVYTDHFGRSAYIQRARSVYQRTMGAVLSPFNAFLLLQGIETVALRMERHVENARK CCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAEFLHRDSRVAWVNYAGFPDSPYYPLVQKYLDGRASSLFTFGIKGGLEAGKAFYDALKL HHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHCCCCHHEEEEECCCCHHHHHHHHHHHHH ITRLVNIGDAKSLACHPASTTHRQMPPEDQRKAGVPPEAIRLSIGIEHIDDIIEDLDQAL HHHHHCCCCCCCEEECCCCCCCCCCCCCHHHHCCCCHHHEEEEECHHHHHHHHHHHHHHH ALACPRQLDAAE HHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8586629; 9190812; 3365412 [H]