| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is blh [H]
Identifier: 146343614
GI number: 146343614
Start: 7113632
End: 7114672
Strand: Direct
Name: blh [H]
Synonym: BRADO6852
Alternate gene names: 146343614
Gene position: 7113632-7114672 (Clockwise)
Preceding gene: 146343613
Following gene: 146343615
Centisome position: 95.4
GC content: 64.84
Gene sequence:
>1041_bases ATGATCTTCCGCCAATTGTTCGACAGCGTCTCCGGCACTTACAGCTACATTCTTGCGAGCCGCTCCGGCGGCGAGGCTGT CATCATCGATCCCGTGCTGGAGAAGGTCGACCGCTATTGCCAGCTGCTGCGCGAGCTCGACTTGCGCCTGGTCAAGGCGA TCGACACCCATTTGCATGCCGATCACGTCACCGGCCTCGGCGCGCTGCGTGACCGCACTCATTGCGTCACCATCATGGGC GAGCAGACCAAGGCGGACGTGGTGGCGATGCGCGTCGGCGAAGGCGACAGGATCGCCATCGAGGGTCTCAGCCTCGATGT GATTTACACGCCGGGGCACACTGACGATTCCTACAGCTTCCTGATGGCCGACCGGGTCTTCACCGGCGACACGCTGCTGA TCCGCGGCACCGGCCGCACCGACTTCCAGAACGGCGACGCCCGGCAGCAATATGATTCGATTTTCAACAAGCTGCTGCGG CTGCCCGATGACACGCTGGTCTACCCCGCGCACGACTACAAGGGCGACACCGTTTCCACGATCGGCGAGGAGCGCCGCTA CAATCCGCGGCTTCAGGTGCAATCCGTCGACGATTACGTGGCGCTGATGGCCAAGCTGAAGCTGCCGAACCCGAAGATGA TGGACGTCGCCGTGCCAGCCAACATGCGCGTCGGGCTGCATCAGGAGGAGCTGACCAGACAGGGCCTGGCCCTGTCGGCC CGAGAAGCGATCGAATGCCTCGGACGGCCCGACGTGCTGCTGGTCGATCTGCGCGAGGCTTCGGAGCGCGCCAAGCACGG CACGCTGTCAGGCGCGCTGCATGCGCCCTACCCTGGGATCGCCGACAATCTCAAACCCGGCGGCATGCTGCGCGAGGTTG CCGCCGCCACCGGGCGCCGCATCGTGTTCTTCTGCGCCTATGGCGAACGCTCGGCCATGGCCGTTCAGACGGCGCAAGAC GCGGGCTTGGCCAACACCGCGCACATCGAGGGCGGACTCGATGCATGGAAGAAGGCCGGTGGACCGGTGGTTGCAGGGTA G
Upstream 100 bases:
>100_bases CCGAATGGCGCACCGCAACGACGCTGCTTCGGCGCCGCATGGATGACCGCGGCCCGACCGTGGTCTAAACCGGCCTCGAT CCGAATCGGGAGGAAGCGCG
Downstream 100 bases:
>100_bases ACGCGAAACAAGCTGCGCCATGAACCCGCCGCGATGGACGCCAACTGTCGCCGGCGTCAAGATGCGGTTCGAGTGGCCAC GATTGTCGTGCCAATCGGCT
Product: bifunctional glyoxylase/rhodanese-like sulfurtransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MIFRQLFDSVSGTYSYILASRSGGEAVIIDPVLEKVDRYCQLLRELDLRLVKAIDTHLHADHVTGLGALRDRTHCVTIMG EQTKADVVAMRVGEGDRIAIEGLSLDVIYTPGHTDDSYSFLMADRVFTGDTLLIRGTGRTDFQNGDARQQYDSIFNKLLR LPDDTLVYPAHDYKGDTVSTIGEERRYNPRLQVQSVDDYVALMAKLKLPNPKMMDVAVPANMRVGLHQEELTRQGLALSA REAIECLGRPDVLLVDLREASERAKHGTLSGALHAPYPGIADNLKPGGMLREVAAATGRRIVFFCAYGERSAMAVQTAQD AGLANTAHIEGGLDAWKKAGGPVVAG
Sequences:
>Translated_346_residues MIFRQLFDSVSGTYSYILASRSGGEAVIIDPVLEKVDRYCQLLRELDLRLVKAIDTHLHADHVTGLGALRDRTHCVTIMG EQTKADVVAMRVGEGDRIAIEGLSLDVIYTPGHTDDSYSFLMADRVFTGDTLLIRGTGRTDFQNGDARQQYDSIFNKLLR LPDDTLVYPAHDYKGDTVSTIGEERRYNPRLQVQSVDDYVALMAKLKLPNPKMMDVAVPANMRVGLHQEELTRQGLALSA REAIECLGRPDVLLVDLREASERAKHGTLSGALHAPYPGIADNLKPGGMLREVAAATGRRIVFFCAYGERSAMAVQTAQD AGLANTAHIEGGLDAWKKAGGPVVAG >Mature_346_residues MIFRQLFDSVSGTYSYILASRSGGEAVIIDPVLEKVDRYCQLLRELDLRLVKAIDTHLHADHVTGLGALRDRTHCVTIMG EQTKADVVAMRVGEGDRIAIEGLSLDVIYTPGHTDDSYSFLMADRVFTGDTLLIRGTGRTDFQNGDARQQYDSIFNKLLR LPDDTLVYPAHDYKGDTVSTIGEERRYNPRLQVQSVDDYVALMAKLKLPNPKMMDVAVPANMRVGLHQEELTRQGLALSA REAIECLGRPDVLLVDLREASERAKHGTLSGALHAPYPGIADNLKPGGMLREVAAATGRRIVFFCAYGERSAMAVQTAQD AGLANTAHIEGGLDAWKKAGGPVVAG
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-B beta-lactamase family [H]
Homologues:
Organism=Homo sapiens, GI41327741, Length=230, Percent_Identity=46.9565217391304, Blast_Score=214, Evalue=1e-55, Organism=Homo sapiens, GI94538322, Length=192, Percent_Identity=25, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI94538320, Length=192, Percent_Identity=25, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI7705793, Length=181, Percent_Identity=28.1767955801105, Blast_Score=71, Evalue=2e-12, Organism=Escherichia coli, GI1787158, Length=191, Percent_Identity=31.413612565445, Blast_Score=75, Evalue=6e-15, Organism=Caenorhabditis elegans, GI17538952, Length=223, Percent_Identity=43.0493273542601, Blast_Score=184, Evalue=5e-47, Organism=Caenorhabditis elegans, GI17536925, Length=246, Percent_Identity=26.8292682926829, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI221330176, Length=231, Percent_Identity=47.6190476190476, Blast_Score=222, Evalue=3e-58, Organism=Drosophila melanogaster, GI24667703, Length=254, Percent_Identity=26.3779527559055, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI24667711, Length=254, Percent_Identity=26.3779527559055, Blast_Score=76, Evalue=3e-14, Organism=Drosophila melanogaster, GI21356335, Length=254, Percent_Identity=25.5905511811024, Blast_Score=76, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005939 - InterPro: IPR001279 [H]
Pfam domain/function: PF04273 DUF442; PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 37823; Mature: 37823
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFRQLFDSVSGTYSYILASRSGGEAVIIDPVLEKVDRYCQLLRELDLRLVKAIDTHLHA CCHHHHHHHHCCCEEEEEEECCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DHVTGLGALRDRTHCVTIMGEQTKADVVAMRVGEGDRIAIEGLSLDVIYTPGHTDDSYSF HHHCCCHHHCCCCEEEEEECCCCCCEEEEEEECCCCEEEEEEEEEEEEECCCCCCCCCEE LMADRVFTGDTLLIRGTGRTDFQNGDARQQYDSIFNKLLRLPDDTLVYPAHDYKGDTVST EEECEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHH IGEERRYNPRLQVQSVDDYVALMAKLKLPNPKMMDVAVPANMRVGLHQEELTRQGLALSA HHHHHCCCCCEEEEEHHHHHHHHHHHCCCCCCEEEEECCCCCEECCCHHHHHHCCCCHHH REAIECLGRPDVLLVDLREASERAKHGTLSGALHAPYPGIADNLKPGGMLREVAAATGRR HHHHHHCCCCCEEEEECHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCE IVFFCAYGERSAMAVQTAQDAGLANTAHIEGGLDAWKKAGGPVVAG EEEEEECCCCCEEEEEEHHCCCCCCEEEECCCHHHHHHCCCCCCCC >Mature Secondary Structure MIFRQLFDSVSGTYSYILASRSGGEAVIIDPVLEKVDRYCQLLRELDLRLVKAIDTHLHA CCHHHHHHHHCCCEEEEEEECCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DHVTGLGALRDRTHCVTIMGEQTKADVVAMRVGEGDRIAIEGLSLDVIYTPGHTDDSYSF HHHCCCHHHCCCCEEEEEECCCCCCEEEEEEECCCCEEEEEEEEEEEEECCCCCCCCCEE LMADRVFTGDTLLIRGTGRTDFQNGDARQQYDSIFNKLLRLPDDTLVYPAHDYKGDTVST EEECEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHH IGEERRYNPRLQVQSVDDYVALMAKLKLPNPKMMDVAVPANMRVGLHQEELTRQGLALSA HHHHHCCCCCEEEEEHHHHHHHHHHHCCCCCCEEEEECCCCCEECCCHHHHHHCCCCHHH REAIECLGRPDVLLVDLREASERAKHGTLSGALHAPYPGIADNLKPGGMLREVAAATGRR HHHHHHCCCCCEEEEECHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCE IVFFCAYGERSAMAVQTAQDAGLANTAHIEGGLDAWKKAGGPVVAG EEEEEECCCCCEEEEEEHHCCCCCCEEEECCCHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194 [H]