Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
---|---|
Accession | NC_009445 |
Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is corA [H]
Identifier: 146343421
GI number: 146343421
Start: 6904931
End: 6905944
Strand: Reverse
Name: corA [H]
Synonym: BRADO6650
Alternate gene names: 146343421
Gene position: 6905944-6904931 (Counterclockwise)
Preceding gene: 146343422
Following gene: 146343418
Centisome position: 92.62
GC content: 67.55
Gene sequence:
>1014_bases ATGCGCCACGTCACAATCCAGTCACCGGCCGACGCGCGTCGCGAGCCTGGCGTGGTCGCGGCCGGCGTTTATGCCAACGG CCGCCGCGTCGCCGATATCGCGATCGACGAGGCCGGCGCATGGAGCCGCAAGCCGGGACATGTCGTCTGGATCGGGCTGC ACGAGCCGGATGCGGCGCTGCTGCAGCGGATCGCCGATCAGTTCAACCTGCATGAGCTCGCGATCGAGGACGCCTCTAAG GCGCATCAGCAGCCGAAGGTCGAGCGCTATGGTGATGCGCTGTTCGTCGTCGCGCGCACCGCGCAGCTCGTCAAGGAGCA CATCATCTTCGGTGAGACCCATATCTTCGTCGGCCCCGGTTTCGTCGTGTCGGTGCGGCACGGCGCCTCGACCTCCTATG GCGCGGTGCGCGAGCGCTGCGAGAGCTGCCCGGGCTCGCTCGCCAAGGGCGAGGACTACATCCTCTATGCGATCCTCGAT TTCATCGTCGACAACTACCGCCCCGTCACCGAGAGCATCATGGCCGAGGTCGAGACCCTGGAGGAGGTCGTGCTGCAGCG GCCGCTGGCGCGCCACGAGGTGGACCGGCTCTATCGTCTCAGGCGCGACCTGCTGCGGCTCCGCCGCGCCGTCGGCCCCG TGGTCGACGTCTGCAAGCGGCTGGAACATGTCGACAATGTCGCGATCGACGCCGAGATGGCGCCGCTGTTCCGCGACGTG CTCGACCATGCCAAGCGCGCCGAGGAGGATGCGGATTCGCTGCGCGAGATCCTCGCCTTCGTGTTCGAGGCCAGCATGAT GGCGGGACAGGCGCAGCAGACCGACATCGCCCGCCGCCTGGCGGCCTGGGCCGCGATCCTCGCGGTGCCGACGGCGGTGG CCGGCATCTACGGCATGAATTTCGAGCACATGCCGGAGCTGAAATGGCAGTACGGCTACTACGCCGTGCTCGGCTTCATT GCGGTCGTCTGCAGCACGCTGTACTGGCAGTTCCGCCGCCGCGGGTGGCTGTGA
Upstream 100 bases:
>100_bases TCCGGCAGTTGCTCGACGGCCCGACCGGCGTGACCTGATGCAGCGCTTGACCCGGCGACTCCTCGCGTCGAAAGTCGCTG TCGAGAGCGGAGAACCCGGC
Downstream 100 bases:
>100_bases GGGGCGCACCGCGAGCCGAACTAAATCTCACTTGTTCATTGCAACACTCTGCGAGCCCCAACTACGGTGCACCCTCTCCC CTTGTGGGAGAGGGTGGCTT
Product: putative metal ion transporter Mg2+ transporter protein (CorA-like)
Products: Ni2; [Cytoplasm]; Co; 2 [Cytoplasm]; Mg (II) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MRHVTIQSPADARREPGVVAAGVYANGRRVADIAIDEAGAWSRKPGHVVWIGLHEPDAALLQRIADQFNLHELAIEDASK AHQQPKVERYGDALFVVARTAQLVKEHIIFGETHIFVGPGFVVSVRHGASTSYGAVRERCESCPGSLAKGEDYILYAILD FIVDNYRPVTESIMAEVETLEEVVLQRPLARHEVDRLYRLRRDLLRLRRAVGPVVDVCKRLEHVDNVAIDAEMAPLFRDV LDHAKRAEEDADSLREILAFVFEASMMAGQAQQTDIARRLAAWAAILAVPTAVAGIYGMNFEHMPELKWQYGYYAVLGFI AVVCSTLYWQFRRRGWL
Sequences:
>Translated_337_residues MRHVTIQSPADARREPGVVAAGVYANGRRVADIAIDEAGAWSRKPGHVVWIGLHEPDAALLQRIADQFNLHELAIEDASK AHQQPKVERYGDALFVVARTAQLVKEHIIFGETHIFVGPGFVVSVRHGASTSYGAVRERCESCPGSLAKGEDYILYAILD FIVDNYRPVTESIMAEVETLEEVVLQRPLARHEVDRLYRLRRDLLRLRRAVGPVVDVCKRLEHVDNVAIDAEMAPLFRDV LDHAKRAEEDADSLREILAFVFEASMMAGQAQQTDIARRLAAWAAILAVPTAVAGIYGMNFEHMPELKWQYGYYAVLGFI AVVCSTLYWQFRRRGWL >Mature_337_residues MRHVTIQSPADARREPGVVAAGVYANGRRVADIAIDEAGAWSRKPGHVVWIGLHEPDAALLQRIADQFNLHELAIEDASK AHQQPKVERYGDALFVVARTAQLVKEHIIFGETHIFVGPGFVVSVRHGASTSYGAVRERCESCPGSLAKGEDYILYAILD FIVDNYRPVTESIMAEVETLEEVVLQRPLARHEVDRLYRLRRDLLRLRRAVGPVVDVCKRLEHVDNVAIDAEMAPLFRDV LDHAKRAEEDADSLREILAFVFEASMMAGQAQQTDIARRLAAWAAILAVPTAVAGIYGMNFEHMPELKWQYGYYAVLGFI AVVCSTLYWQFRRRGWL
Specific function: Mediates influx of magnesium ions [H]
COG id: COG0598
COG function: function code P; Mg2+ and Co2+ transporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family [H]
Homologues:
Organism=Escherichia coli, GI2367297, Length=234, Percent_Identity=25.6410256410256, Blast_Score=68, Evalue=9e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004488 - InterPro: IPR002523 [H]
Pfam domain/function: PF01544 CorA [H]
EC number: NA
Molecular weight: Translated: 37857; Mature: 37857
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHVTIQSPADARREPGVVAAGVYANGRRVADIAIDEAGAWSRKPGHVVWIGLHEPDAAL CCEEECCCCCCCCCCCCCEEEEEEECCCEEEEEEEECCCCCCCCCCCEEEEEECCCCHHH LQRIADQFNLHELAIEDASKAHQQPKVERYGDALFVVARTAQLVKEHIIFGETHIFVGPG HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEECCC FVVSVRHGASTSYGAVRERCESCPGSLAKGEDYILYAILDFIVDNYRPVTESIMAEVETL EEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH EEVVLQRPLARHEVDRLYRLRRDLLRLRRAVGPVVDVCKRLEHVDNVAIDAEMAPLFRDV HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCEECHHHHHHHHHH LDHAKRAEEDADSLREILAFVFEASMMAGQAQQTDIARRLAAWAAILAVPTAVAGIYGMN HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC FEHMPELKWQYGYYAVLGFIAVVCSTLYWQFRRRGWL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRHVTIQSPADARREPGVVAAGVYANGRRVADIAIDEAGAWSRKPGHVVWIGLHEPDAAL CCEEECCCCCCCCCCCCCEEEEEEECCCEEEEEEEECCCCCCCCCCCEEEEEECCCCHHH LQRIADQFNLHELAIEDASKAHQQPKVERYGDALFVVARTAQLVKEHIIFGETHIFVGPG HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEECCC FVVSVRHGASTSYGAVRERCESCPGSLAKGEDYILYAILDFIVDNYRPVTESIMAEVETL EEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH EEVVLQRPLARHEVDRLYRLRRDLLRLRRAVGPVVDVCKRLEHVDNVAIDAEMAPLFRDV HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCEECHHHHHHHHHH LDHAKRAEEDADSLREILAFVFEASMMAGQAQQTDIARRLAAWAAILAVPTAVAGIYGMN HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC FEHMPELKWQYGYYAVLGFIAVVCSTLYWQFRRRGWL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Ni2; [Periplasm]; Co; 2 [Periplasm]; Mg (II) [Periplasm] [C]
Specific reaction: Ni2+ [Periplasm] = Ni2+ [Cytoplasm] Co+2 [Periplasm] = Co+2 [Cytoplasm] Mg (II) [Periplasm] = Mg (II) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]