| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is thrB [H]
Identifier: 146343360
GI number: 146343360
Start: 6837112
End: 6838083
Strand: Reverse
Name: thrB [H]
Synonym: BRADO6587
Alternate gene names: 146343360
Gene position: 6838083-6837112 (Counterclockwise)
Preceding gene: 146343361
Following gene: 146343359
Centisome position: 91.71
GC content: 66.77
Gene sequence:
>972_bases ATGGCGGTCTATACCGACGTCGCCGCCGACGAGCTTGCGGACTTCCTCAAGACCTACGACATCGGCGAGCTGCTCTCCTA CAAGGGCATCGCCGAGGGCGTCGAGAACTCCAACTTCCTGCTGCACACCACGAAGGGCTCCTACATCCTCACGCTCTATG AGAAGCGCGTGGCGGTGGACGATCTGCCGTATTTTCTGGGCCTGATGGCCCATCTCGCCGAGCGCGGCGTCAACTGCCCG CAGCCGGCGCGCAACCGCGACGGCGCGGTGTATTCCAGCCTGGCCGGCCGGCCGGCGGCGATCATCAACTTTCTCGAAGG GATGTGGCCGCGCAAGCCGGCCGTCGTGCATTGCGCAGGCGTTGGCGAGGCGCTGGCGCGGATGCATTTGGCTGGGCGCG ACTTCCCGCTGGTGCGCAAGAACCCGCTGTCGGTGTCCGGCTGGCAATCGCTGTTCGCCCAGGCGGCCGATCGCGCCGAC ACGGTGCAGGCCGGCCTGTCCGCGCTGCTCTCGACCGAGTTGGACTACCTTGCGCGCGCCTGGCCGACAGATCTGCCGGA AGGCGTCATTCACGCCGACCTGTTTCCGGACAACGTCTTCTTCCTCGGCGACCATCTGTCCGGACTGATCGACTTCCCGT TCTCCTGCAACGACATCCTCGCCTATGACGTGGCGATCTGCCTGAACGCCTGGTGCTTCGAGGCCGACCATTCGCTCAAC GTCACCAAGGCGCGCGCCTTCTTCAATGCGTATGGCCGCGCGCGGCCGCTGTCGGACGCGGAGCTGGAGGCGCTGCCGCT GCTCGCGCGCGGCGCCGCGATCCGCTTCCTGCTGACGCGGCTGGTCGACTGGCTCAACGTGCCCGCGGGCGCGCTGGTGA AGCCGAAGGATCCGCTCGAATATGTCCGCAAGCTGCGCTTCCATCAGGCGGTGACCAGCGCGCGCGACTACGGCATCGGA GCATCCGCATGA
Upstream 100 bases:
>100_bases CGACGCCCGCATGCGCGATGAAGGCGCAACGGGCCTGTCCGGTGACGAAGTTCGCAGCGGAGAGGCGGGGGCAGGCGAAC TTCGATAACCGGGACATCGC
Downstream 100 bases:
>100_bases GCGAGCTTCCGGTCGTCAGCATCTTCACCGACGGCGCCTGCTCCGGAAATCCCGGCCCTGGCGGCTGGGGCGCGATCCTG CGCTTCGGCGACAAGGAGAA
Product: homoserine kinase
Products: NA
Alternate protein names: HK; HSK [H]
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MAVYTDVAADELADFLKTYDIGELLSYKGIAEGVENSNFLLHTTKGSYILTLYEKRVAVDDLPYFLGLMAHLAERGVNCP QPARNRDGAVYSSLAGRPAAIINFLEGMWPRKPAVVHCAGVGEALARMHLAGRDFPLVRKNPLSVSGWQSLFAQAADRAD TVQAGLSALLSTELDYLARAWPTDLPEGVIHADLFPDNVFFLGDHLSGLIDFPFSCNDILAYDVAICLNAWCFEADHSLN VTKARAFFNAYGRARPLSDAELEALPLLARGAAIRFLLTRLVDWLNVPAGALVKPKDPLEYVRKLRFHQAVTSARDYGIG ASA
Sequences:
>Translated_323_residues MAVYTDVAADELADFLKTYDIGELLSYKGIAEGVENSNFLLHTTKGSYILTLYEKRVAVDDLPYFLGLMAHLAERGVNCP QPARNRDGAVYSSLAGRPAAIINFLEGMWPRKPAVVHCAGVGEALARMHLAGRDFPLVRKNPLSVSGWQSLFAQAADRAD TVQAGLSALLSTELDYLARAWPTDLPEGVIHADLFPDNVFFLGDHLSGLIDFPFSCNDILAYDVAICLNAWCFEADHSLN VTKARAFFNAYGRARPLSDAELEALPLLARGAAIRFLLTRLVDWLNVPAGALVKPKDPLEYVRKLRFHQAVTSARDYGIG ASA >Mature_322_residues AVYTDVAADELADFLKTYDIGELLSYKGIAEGVENSNFLLHTTKGSYILTLYEKRVAVDDLPYFLGLMAHLAERGVNCPQ PARNRDGAVYSSLAGRPAAIINFLEGMWPRKPAVVHCAGVGEALARMHLAGRDFPLVRKNPLSVSGWQSLFAQAADRADT VQAGLSALLSTELDYLARAWPTDLPEGVIHADLFPDNVFFLGDHLSGLIDFPFSCNDILAYDVAICLNAWCFEADHSLNV TKARAFFNAYGRARPLSDAELEALPLLARGAAIRFLLTRLVDWLNVPAGALVKPKDPLEYVRKLRFHQAVTSARDYGIGA SA
Specific function: Unknown
COG id: COG2334
COG function: function code R; Putative homoserine kinase type II (protein kinase fold)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pseudomonas-type thrB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002575 - InterPro: IPR005280 - InterPro: IPR011009 [H]
Pfam domain/function: PF01636 APH [H]
EC number: =2.7.1.39 [H]
Molecular weight: Translated: 35356; Mature: 35225
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVYTDVAADELADFLKTYDIGELLSYKGIAEGVENSNFLLHTTKGSYILTLYEKRVAVD CCEECHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEEHHHHHHH DLPYFLGLMAHLAERGVNCPQPARNRDGAVYSSLAGRPAAIINFLEGMWPRKPAVVHCAG HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHCCCCCCCCEEEECC VGEALARMHLAGRDFPLVRKNPLSVSGWQSLFAQAADRADTVQAGLSALLSTELDYLARA HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WPTDLPEGVIHADLFPDNVFFLGDHLSGLIDFPFSCNDILAYDVAICLNAWCFEADHSLN CCCCCCCCCEEECCCCCCEEEECCHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC VTKARAFFNAYGRARPLSDAELEALPLLARGAAIRFLLTRLVDWLNVPAGALVKPKDPLE HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH YVRKLRFHQAVTSARDYGIGASA HHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AVYTDVAADELADFLKTYDIGELLSYKGIAEGVENSNFLLHTTKGSYILTLYEKRVAVD CEECHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEEHHHHHHH DLPYFLGLMAHLAERGVNCPQPARNRDGAVYSSLAGRPAAIINFLEGMWPRKPAVVHCAG HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHCCCCCCCCEEEECC VGEALARMHLAGRDFPLVRKNPLSVSGWQSLFAQAADRADTVQAGLSALLSTELDYLARA HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WPTDLPEGVIHADLFPDNVFFLGDHLSGLIDFPFSCNDILAYDVAICLNAWCFEADHSLN CCCCCCCCCEEECCCCCCEEEECCHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC VTKARAFFNAYGRARPLSDAELEALPLLARGAAIRFLLTRLVDWLNVPAGALVKPKDPLE HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH YVRKLRFHQAVTSARDYGIGASA HHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA