| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is nadE [H]
Identifier: 146343329
GI number: 146343329
Start: 6803846
End: 6805882
Strand: Reverse
Name: nadE [H]
Synonym: BRADO6555
Alternate gene names: 146343329
Gene position: 6805882-6803846 (Counterclockwise)
Preceding gene: 146343331
Following gene: 146343328
Centisome position: 91.27
GC content: 67.8
Gene sequence:
>2037_bases ATGAATTTCCATTCGATCTACCGTCATGGCTTCGCCCGCGTCGCCGCCTGCGTCACCGCCTCCAGCGTCGCCAATCCCAC CGCCAACGCGGCGGCGATCCTGGCGGCCGCGCGCGCCTGCCATGAGCAGGGCGCGGCGGTCGCGGTGTTTCCCGAGCTGT GCCTGTCCGGCTACGCCATCGACGACCTCGTCAAGCAGGATCCGCTGCTCGACGCCGTGCAGCGCGGGCTGCTCACGCTG GTCGAAGCCTCGCACGACCTGATGCCGGTGCTGATCGTCGGCGCACCGCTGCGCTTTTCGCATCGCGTCTACAATTGCGC CGTGGTGATCCATCGCGGCGAGGTGCTCGGCGTCATTCCGAAAAGCTATCTGCCGACGTATCGCGAGTTCTATGAAGGCC GTCACTTCGCCTCCGGCGCCGGCATCCGCGGCGAGATGATCGAGGTCGCCGAAACGATGGCGCCGTTCGGCACCGACCTC TTGTTCGCCGCCGCTGACGTCGCCGGCCTCGTCATCGGCGTCGAGGTCTGCGAGGACATGTGGGTGCCGGTGACGCCGGC CTCCGAGCTCGCGCTCGCCGGCGCCACCGTGCTCGTCAATCTCTCCGGCAGCCCGATCACCGTGGGCCGCGCCGAATCCC GCTCGCTGCTGTGCCGCTCGACCTCGGCGCGCTGCCTTGCCGCCTACATCTACGCCGCCGCCGGCGTGGGTGAATCCACC ACCGATCTCGCCTGGGACGGCCAGACCTCGATCTTCGAGAACGGCGTGCTGCTGGCCGAGAGCGAGCGCTTCCGCCAGAC CGGCCAGACCATCTTCGCCGATGTCGATCTCGATCTGCTGCGCCAGGAGCGGGCGCTGATGGGCACGTTCGACGACAACG CGCGCGCGCAGGATCAGAGCGTGCATTGGCGCCGCATCGGCTTCGAGCTGCAGCCGGCCGAGAGTGACATCGGCTTCAGG CGGGCGATCGAGCGCTTCCCTTTCGTGCCGAGCGATGCCGCGCGGCTCGATCAGGACTGCTACGAGGCCTACAACATCCA GGTCGCCGGGCTGACACAGCGGCTGCGCGCTACCGGAACCAAGCGCATCGTGATCGGCGTCTCCGGTGGCCTCGATTCCA CGCATGCGCTGATCGTCGCCGCCAAGGCGATGGACCTGCTCGGCCTGCCCCGCACCAACATCCTCGCCTACACGATGCCG GGCTTCGGCACGGGCGCGCAGAGCAAGTCTTACGCGCACGCCTTGATGAAGTCCCTCGAGGTCAGCGCCGCCGAGCTCGA CATCCGCCCCGCCGCCACGCAGATGCTCAAGGACATCGGCCATCCGTTCGGCCGCGGCGAGGAGGTCTACGACGTCACCT TCGAGAACGTGCAGGCGGGCCTCCGCACCGACTATCTGTTCCGCCTCGCGAATGACCGCGGCGGCCTCGTGCTCGGCACC GGCGACCTCTCCGAGCTGGCGCTCGGATGGTGCACCTATGGCGTCGGCGATCAGATGTCGCACTACAACGTCAATGCCGG CGTGCCGAAGACCCTGATCCAGCATCTCATCCGCTGGGTAATCGCCTCGCGTCAGTTCTCGGCCGAGGTCGACCGCACCC TCGAAGCCGTGCTGTCGGCCGAAATCTCGCCGGAGCTCGTGCCGGTGAAGGAGGGCGAGACGCCGCAGAGCACGCAGGCC GCGATCGGTCCCTATGAGCTGCAGGACTTCAATCTGTTCTACACGCTGCGCTACGGCCTACGCCCATCGAAGATCGCCTT CATGGCGCACCACGCCTGGAAGGACGCGCGCGAGGGCGCCTGGCCGCCGCATTTCCCCGATGACAAGCGCAACGCCTATG CGCTCGGCGAGATCCGGAAGTGGCTGGAGGTCTTCCTCAAGCGCTTCTTCGCCTTCAGCCAGTTCAAGCGGTCGGCAATG CCCAACGGCCCCAAAGTCGTCGCCGGCGGCGCGCTGTCCCCCCGCGGCGACTGGCGCGCGCCGTCGGATGGTAACGCCGC GGCGTGGCTGGAGGATCTGGAGAGCGTGCCGAAGTAG
Upstream 100 bases:
>100_bases GCGCCGCCTGCGGGCGCGGCGGTGCTGACCTGACGCTCTTGTCATGGCTCCCGTCATGGAACATGTCGTATGCTCCGGCG ACAGGAGATGGACTGCCCCG
Downstream 100 bases:
>100_bases GGGCTGCAGTGGGACCACGTCTTCGTCATCGAGGCGCGATGTCTCAGCACGGGCAGTGCGCTCCCTCTCCCCGTAAGCAG GGGGAGAGGGAGCGCAGCGG
Product: NAD synthetase
Products: NA
Alternate protein names: NAD(+) synthase [glutamine-hydrolyzing] [H]
Number of amino acids: Translated: 678; Mature: 678
Protein sequence:
>678_residues MNFHSIYRHGFARVAACVTASSVANPTANAAAILAAARACHEQGAAVAVFPELCLSGYAIDDLVKQDPLLDAVQRGLLTL VEASHDLMPVLIVGAPLRFSHRVYNCAVVIHRGEVLGVIPKSYLPTYREFYEGRHFASGAGIRGEMIEVAETMAPFGTDL LFAAADVAGLVIGVEVCEDMWVPVTPASELALAGATVLVNLSGSPITVGRAESRSLLCRSTSARCLAAYIYAAAGVGEST TDLAWDGQTSIFENGVLLAESERFRQTGQTIFADVDLDLLRQERALMGTFDDNARAQDQSVHWRRIGFELQPAESDIGFR RAIERFPFVPSDAARLDQDCYEAYNIQVAGLTQRLRATGTKRIVIGVSGGLDSTHALIVAAKAMDLLGLPRTNILAYTMP GFGTGAQSKSYAHALMKSLEVSAAELDIRPAATQMLKDIGHPFGRGEEVYDVTFENVQAGLRTDYLFRLANDRGGLVLGT GDLSELALGWCTYGVGDQMSHYNVNAGVPKTLIQHLIRWVIASRQFSAEVDRTLEAVLSAEISPELVPVKEGETPQSTQA AIGPYELQDFNLFYTLRYGLRPSKIAFMAHHAWKDAREGAWPPHFPDDKRNAYALGEIRKWLEVFLKRFFAFSQFKRSAM PNGPKVVAGGALSPRGDWRAPSDGNAAAWLEDLESVPK
Sequences:
>Translated_678_residues MNFHSIYRHGFARVAACVTASSVANPTANAAAILAAARACHEQGAAVAVFPELCLSGYAIDDLVKQDPLLDAVQRGLLTL VEASHDLMPVLIVGAPLRFSHRVYNCAVVIHRGEVLGVIPKSYLPTYREFYEGRHFASGAGIRGEMIEVAETMAPFGTDL LFAAADVAGLVIGVEVCEDMWVPVTPASELALAGATVLVNLSGSPITVGRAESRSLLCRSTSARCLAAYIYAAAGVGEST TDLAWDGQTSIFENGVLLAESERFRQTGQTIFADVDLDLLRQERALMGTFDDNARAQDQSVHWRRIGFELQPAESDIGFR RAIERFPFVPSDAARLDQDCYEAYNIQVAGLTQRLRATGTKRIVIGVSGGLDSTHALIVAAKAMDLLGLPRTNILAYTMP GFGTGAQSKSYAHALMKSLEVSAAELDIRPAATQMLKDIGHPFGRGEEVYDVTFENVQAGLRTDYLFRLANDRGGLVLGT GDLSELALGWCTYGVGDQMSHYNVNAGVPKTLIQHLIRWVIASRQFSAEVDRTLEAVLSAEISPELVPVKEGETPQSTQA AIGPYELQDFNLFYTLRYGLRPSKIAFMAHHAWKDAREGAWPPHFPDDKRNAYALGEIRKWLEVFLKRFFAFSQFKRSAM PNGPKVVAGGALSPRGDWRAPSDGNAAAWLEDLESVPK >Mature_678_residues MNFHSIYRHGFARVAACVTASSVANPTANAAAILAAARACHEQGAAVAVFPELCLSGYAIDDLVKQDPLLDAVQRGLLTL VEASHDLMPVLIVGAPLRFSHRVYNCAVVIHRGEVLGVIPKSYLPTYREFYEGRHFASGAGIRGEMIEVAETMAPFGTDL LFAAADVAGLVIGVEVCEDMWVPVTPASELALAGATVLVNLSGSPITVGRAESRSLLCRSTSARCLAAYIYAAAGVGEST TDLAWDGQTSIFENGVLLAESERFRQTGQTIFADVDLDLLRQERALMGTFDDNARAQDQSVHWRRIGFELQPAESDIGFR RAIERFPFVPSDAARLDQDCYEAYNIQVAGLTQRLRATGTKRIVIGVSGGLDSTHALIVAAKAMDLLGLPRTNILAYTMP GFGTGAQSKSYAHALMKSLEVSAAELDIRPAATQMLKDIGHPFGRGEEVYDVTFENVQAGLRTDYLFRLANDRGGLVLGT GDLSELALGWCTYGVGDQMSHYNVNAGVPKTLIQHLIRWVIASRQFSAEVDRTLEAVLSAEISPELVPVKEGETPQSTQA AIGPYELQDFNLFYTLRYGLRPSKIAFMAHHAWKDAREGAWPPHFPDDKRNAYALGEIRKWLEVFLKRFFAFSQFKRSAM PNGPKVVAGGALSPRGDWRAPSDGNAAAWLEDLESVPK
Specific function: Can use both glutamine or ammonia as a nitrogen source [H]
COG id: COG0171
COG function: function code H; NAD synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
Organism=Homo sapiens, GI41393551, Length=610, Percent_Identity=24.7540983606557, Blast_Score=105, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17538756, Length=611, Percent_Identity=24.0589198036007, Blast_Score=95, Evalue=9e-20, Organism=Saccharomyces cerevisiae, GI6321865, Length=649, Percent_Identity=24.0369799691834, Blast_Score=103, Evalue=1e-22, Organism=Drosophila melanogaster, GI24641841, Length=597, Percent_Identity=23.1155778894472, Blast_Score=96, Evalue=1e-19, Organism=Drosophila melanogaster, GI24641843, Length=597, Percent_Identity=23.1155778894472, Blast_Score=96, Evalue=1e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014445 - InterPro: IPR022310 - InterPro: IPR003694 - InterPro: IPR003010 - InterPro: IPR014729 [H]
Pfam domain/function: PF00795 CN_hydrolase; PF02540 NAD_synthase [H]
EC number: =6.3.5.1 [H]
Molecular weight: Translated: 73726; Mature: 73726
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFHSIYRHGFARVAACVTASSVANPTANAAAILAAARACHEQGAAVAVFPELCLSGYAI CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHCCCCH DDLVKQDPLLDAVQRGLLTLVEASHDLMPVLIVGAPLRFSHRVYNCAVVIHRGEVLGVIP HHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHCCEEEEEEEEEECCCEEEECC KSYLPTYREFYEGRHFASGAGIRGEMIEVAETMAPFGTDLLFAAADVAGLVIGVEVCEDM HHHCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC WVPVTPASELALAGATVLVNLSGSPITVGRAESRSLLCRSTSARCLAAYIYAAAGVGEST CCCCCCHHHHHHCCEEEEEEECCCEEEEECCCCCCEEECCCCHHHHHHHHHHHHCCCCCC TDLAWDGQTSIFENGVLLAESERFRQTGQTIFADVDLDLLRQERALMGTFDDNARAQDQS CCCEECCCCHHHHCCEEEECCHHHHHCCCEEEEECCHHHHHHHHHHCCCCCCCCCCCCCC VHWRRIGFELQPAESDIGFRRAIERFPFVPSDAARLDQDCYEAYNIQVAGLTQRLRATGT CEEEEECCEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCEEEEHHHHHHHHCCC KRIVIGVSGGLDSTHALIVAAKAMDLLGLPRTNILAYTMPGFGTGAQSKSYAHALMKSLE CEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHC VSAAELDIRPAATQMLKDIGHPFGRGEEVYDVTFENVQAGLRTDYLFRLANDRGGLVLGT CCHHHCCCCHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHCCCCEEEEEEECCCCCEEEEC GDLSELALGWCTYGVGDQMSHYNVNAGVPKTLIQHLIRWVIASRQFSAEVDRTLEAVLSA CCHHHHHHHHHHCCCCCCCCCEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC EISPELVPVKEGETPQSTQAAIGPYELQDFNLFYTLRYGLRPSKIAFMAHHAWKDAREGA CCCCCEEECCCCCCCCCCCCCCCCEEEECCEEEEEEEECCCCCHHHHHHHHHHHHHHCCC WPPHFPDDKRNAYALGEIRKWLEVFLKRFFAFSQFKRSAMPNGPKVVAGGALSPRGDWRA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCC PSDGNAAAWLEDLESVPK CCCCCHHHHHHHHHHCCC >Mature Secondary Structure MNFHSIYRHGFARVAACVTASSVANPTANAAAILAAARACHEQGAAVAVFPELCLSGYAI CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHCCCCH DDLVKQDPLLDAVQRGLLTLVEASHDLMPVLIVGAPLRFSHRVYNCAVVIHRGEVLGVIP HHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHCCEEEEEEEEEECCCEEEECC KSYLPTYREFYEGRHFASGAGIRGEMIEVAETMAPFGTDLLFAAADVAGLVIGVEVCEDM HHHCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC WVPVTPASELALAGATVLVNLSGSPITVGRAESRSLLCRSTSARCLAAYIYAAAGVGEST CCCCCCHHHHHHCCEEEEEEECCCEEEEECCCCCCEEECCCCHHHHHHHHHHHHCCCCCC TDLAWDGQTSIFENGVLLAESERFRQTGQTIFADVDLDLLRQERALMGTFDDNARAQDQS CCCEECCCCHHHHCCEEEECCHHHHHCCCEEEEECCHHHHHHHHHHCCCCCCCCCCCCCC VHWRRIGFELQPAESDIGFRRAIERFPFVPSDAARLDQDCYEAYNIQVAGLTQRLRATGT CEEEEECCEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCEEEEHHHHHHHHCCC KRIVIGVSGGLDSTHALIVAAKAMDLLGLPRTNILAYTMPGFGTGAQSKSYAHALMKSLE CEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHC VSAAELDIRPAATQMLKDIGHPFGRGEEVYDVTFENVQAGLRTDYLFRLANDRGGLVLGT CCHHHCCCCHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHCCCCEEEEEEECCCCCEEEEC GDLSELALGWCTYGVGDQMSHYNVNAGVPKTLIQHLIRWVIASRQFSAEVDRTLEAVLSA CCHHHHHHHHHHCCCCCCCCCEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC EISPELVPVKEGETPQSTQAAIGPYELQDFNLFYTLRYGLRPSKIAFMAHHAWKDAREGA CCCCCEEECCCCCCCCCCCCCCCCEEEECCEEEEEEEECCCCCHHHHHHHHHHHHHHCCC WPPHFPDDKRNAYALGEIRKWLEVFLKRFFAFSQFKRSAMPNGPKVVAGGALSPRGDWRA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCC PSDGNAAAWLEDLESVPK CCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]