Click here to switch to the map view.

The map label for this gene is 146343331

Identifier: 146343331

GI number: 146343331

Start: 6806932

End: 6807591

Strand: Reverse

Name: 146343331

Synonym: BRADO6557

Alternate gene names: NA

Gene position: 6807591-6806932 (Counterclockwise)

Preceding gene: 146343334

Following gene: 146343329

Centisome position: 91.3

GC content: 71.82

Gene sequence:

>660_bases
GTGTCAACATCGATTGAAATGACGAAAATGCCCGCAGACCCGACGTCGACCGAGCCGCGGCCCTATCATCACGGCAATCT
GAAGCAGGCGCTGATCGCCGCCGCGACCGAGCTGCTCGAGCGGGATGGCGCCGAGGCGCTGTCGTTCCGCGCGACTGCGC
GAGCCGCCGGCGTGTCGCAGTCGGCGCCCTACAATCATTTCGCCGGCAAGGAAGACCTGCTGGCCACCGTCGCCGAAGCC
GGCTTCCTCGCCCTCACCACGTCGCAGGAAGCTGCGCAGGCGCGCTGGCCGGCTGGGGAGGACCAGCTGACCGGCCTCGG
TCTCGACTATATCGGCTTCGCCGCCGCGCGGCCGCAGCTCTACCGGCTGATGTTCGGGGTCGGCCTGCCCGACTGGCACG
CCTATCCGGAGGTGGCCTCGGCAAAGCGCGCGACCTTCGGACCGCTGCGCCAGGCGCTCACGAGCTTCCTGCCCGCTGCG
ACGCCCGCCGCGACCCTCGAGCAAGCCGCCGTCGCCGCGTGGGGGCTCGCGCATGGGCTGGCGATGCTGCGGATCGACGG
CTCGCTCGGACGCCGGGACGAACCGGGCGGCCCGCCGCCGGAGGAGGGCGCACTGCGTCTGTTCGGGCGCGGCTTGCGCG
CGGCCTGCGCGATGTCCTGA

Upstream 100 bases:

>100_bases
CGAGACCGCACGGGGGTTGAGGGTGCGTCGGTCATGGCATCATCTCCGGTTCAGATCCGATGTGAACGATGATAACATCA
TCCTAGGCTAAATATGATCA

Downstream 100 bases:

>100_bases
ACCCCAACGCGGGTAGGCGTCAGCGCCCTTCGCCCGCCGCCCACAGCGCGTCGAGCCCTTCGCGGTAGGTCGGATAGGCG
AAGACCAGGCCGAGATCCTG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Regulatory Protein TetR; TetR-Family Transcriptional Regulator; Transcriptional Regulator TetR; AcrR Family Transcriptional Regulator; Transcription Regulator TetR Family Protein; Regulatory Protein Tetr; Transcriptional Regulator TetR-Family; TetR/AcrR Family Transcriptional Regulator

Number of amino acids: Translated: 219; Mature: 218

Protein sequence:

>219_residues
MSTSIEMTKMPADPTSTEPRPYHHGNLKQALIAAATELLERDGAEALSFRATARAAGVSQSAPYNHFAGKEDLLATVAEA
GFLALTTSQEAAQARWPAGEDQLTGLGLDYIGFAAARPQLYRLMFGVGLPDWHAYPEVASAKRATFGPLRQALTSFLPAA
TPAATLEQAAVAAWGLAHGLAMLRIDGSLGRRDEPGGPPPEEGALRLFGRGLRAACAMS

Sequences:

>Translated_219_residues
MSTSIEMTKMPADPTSTEPRPYHHGNLKQALIAAATELLERDGAEALSFRATARAAGVSQSAPYNHFAGKEDLLATVAEA
GFLALTTSQEAAQARWPAGEDQLTGLGLDYIGFAAARPQLYRLMFGVGLPDWHAYPEVASAKRATFGPLRQALTSFLPAA
TPAATLEQAAVAAWGLAHGLAMLRIDGSLGRRDEPGGPPPEEGALRLFGRGLRAACAMS
>Mature_218_residues
STSIEMTKMPADPTSTEPRPYHHGNLKQALIAAATELLERDGAEALSFRATARAAGVSQSAPYNHFAGKEDLLATVAEAG
FLALTTSQEAAQARWPAGEDQLTGLGLDYIGFAAARPQLYRLMFGVGLPDWHAYPEVASAKRATFGPLRQALTSFLPAAT
PAATLEQAAVAAWGLAHGLAMLRIDGSLGRRDEPGGPPPEEGALRLFGRGLRAACAMS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23055; Mature: 22924

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTSIEMTKMPADPTSTEPRPYHHGNLKQALIAAATELLERDGAEALSFRATARAAGVSQ
CCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCC
SAPYNHFAGKEDLLATVAEAGFLALTTSQEAAQARWPAGEDQLTGLGLDYIGFAAARPQL
CCCCCCCCCHHHHHHHHHHCCEEEEECCHHHHHHCCCCCCCHHCCCCHHHHHHHHCCHHH
YRLMFGVGLPDWHAYPEVASAKRATFGPLRQALTSFLPAATPAATLEQAAVAAWGLAHGL
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCE
AMLRIDGSLGRRDEPGGPPPEEGALRLFGRGLRAACAMS
EEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
STSIEMTKMPADPTSTEPRPYHHGNLKQALIAAATELLERDGAEALSFRATARAAGVSQ
CCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCC
SAPYNHFAGKEDLLATVAEAGFLALTTSQEAAQARWPAGEDQLTGLGLDYIGFAAARPQL
CCCCCCCCCHHHHHHHHHHCCEEEEECCHHHHHHCCCCCCCHHCCCCHHHHHHHHCCHHH
YRLMFGVGLPDWHAYPEVASAKRATFGPLRQALTSFLPAATPAATLEQAAVAAWGLAHGL
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCE
AMLRIDGSLGRRDEPGGPPPEEGALRLFGRGLRAACAMS
EEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA