| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is tynA [H]
Identifier: 146343302
GI number: 146343302
Start: 6776651
End: 6778654
Strand: Reverse
Name: tynA [H]
Synonym: BRADO6525
Alternate gene names: 146343302
Gene position: 6778654-6776651 (Counterclockwise)
Preceding gene: 146343303
Following gene: 146343299
Centisome position: 90.91
GC content: 65.72
Gene sequence:
>2004_bases ATGGAGTCCAACGTGCAGGACATCACCGCCGCCGCGACCGCCGTGGTTCATCCGCTCGACCCTTTGACATCGGACGAGAT CGCGGCCGCCTGCCGCCCGGTGCATGCGGCCGCCGTCTCCGCGGAGCACTGCCGCTTCCCGATCGTGCGGCTGGAGGAGC CAGCCAAGGCCGAGCTGATCGCCTGCGAGCGCGGACAGGCGCTGCCGCGCAGGGCCTTCGTGGTGTCGCTCGACATCGCG AGCGGCGAGTCGGTCGAGCACGTCGTCGATCTCGGCCGCGGCGAGATCGTTGCCCGCAAGGTGGTGCCGAACCGCGAGGC GCCTTACGGCCAGCCGCCGGTCATGCTCGAAGAGTTCTTCCGCTGTGAGGCCGCGGTCAAGGCCGATGCCGGCTGGCGCA AGGCGATGCATCGGCGTGGTCTCACCGACAAGGACATCGAGCTGGTGCAGGTCGATCCATTCTCGTCCGGCTTCTTCGAC CTGCCGTTCGAGCGCGGCGCCCGCATCGTCCGCGCCGTCAGCTATTTCCGCGAGCATCCGCAGGACAATGGCTATGCGCA TCCGATCGAGGGTGTGGTCGCCGTGGTCGATCTGATCGCCGGCAAGGTGATCGATCTGACCGATCAGGATCCGGTCATCC CGATCCCGCGCAAGAAGCGCAACTACGGTGCGCATGAGGTGACCTCGCCGCGTACCGGCATCAAGCCGCTCGACATCGAG CAGCCGCAGGGGCCGAGCTTCACGGTCGACGGCTGGAAGGTCGATTGGCAGAAATGGAGTTTTCGCGTCGGCTTCACGCC GCGCGAGGGCCTCGTGCTGCATCGGCTGTGCTATCAGGACGGCGAGCGCACCCGCCCGATCATCCATCGCGCCAGCGTCA CCGAGATGGTCGTGCCTTACGCCGACCCGACCGCCAACCATTTCTGGAAGTCGGCGTTCGACGCCGGCGAATACGGCCTC GGCATGCTGGCGAATGCGCTGGAGCTCGGCTGCGACTGTCTCGGCAACATCCATTACTTCGACGTGCCCGCCGCCGACAG CAAGGGCGAGCCGTTCGTGATGCAGAACGCGATCTGCATGCACGAGGAGGACTACGGCGTCCTCTGGAAGCACTATGAGT TCCGCAACGGCCTGTTCGAGGTGCGGCGCTCGCGCCGCCTCGTCATCAGCTTCTTCGCCACCGTCGGCAACTACGATTAC GGCTTCTACTGGTATCTGTACCAGGACGGCACCATCCAGCTCGAATGCAAGCTGACCGGCATCATCCAGACCGCGGCGGT GGCGCCGGGGGCGACCTATCCGTGGGGCGGCATGGTCGACGACAATCTCGGTGGGCCCACGCATCAGCATTTCTTCAACG CTCGCCTGCACATGGACATCGATGGCGGCGGCAACACCGTCACCGAGCACGAGTTCGTGCCGCGGCCCTGGGGCGGCGAC AATCCGCACGGCAACGTGTTCGACACCACGAGCCGGGTGCTGGCGCGCGAGCGCGATGCGGCCCGCCTCGCCAATGGCGA GACCGGACGCTACTGGAAGATCTCCAATCCCAACGCAAAGAACTCAGTGGGTGGCGCGCCGGGCTACAAGCTGATCGTCA ATCCCAGTCCGGTGATGCTGGCGCAGGAGGGGAGCTTCGTGCGCAGCCGCGGCGGCTTCGCCACCAAGCATGTCTGGGTC ACCGCCTATGATCCGGCGGAGAAATACGCCAGCGGCGACTATCCGAACGTGCATGGCGGCGGCGACGGTCTGCCGCGCTA CATCGCGCAGAACCGCAGCATCGAAAACACCGACATCGTGGTCTGGCATTCGTTCGGGCACACTCATGTGTGCAAACCGG AGGATTTCCCGATCATGCCGGTCGAGTATGCCGGCTTCTTGCTGAAGCCCGTCGGCTTCTTCGCCGCGAATGCCGGCTTC GACATTCCAGCGGAGCGGAACGCGAAGAGCGTGCTGAGCGCGGACGGGACGTCCGGCACGGAAGGCGGTAGCTGCTGTCA CTGA
Upstream 100 bases:
>100_bases TCAAGCTCGCCACCCAGGGCAAGGCGATGGACATCGCCCAGGACCATCGCTGGCTCGCCGGCTTCCGCGCCATCACCGCG CATCTCTCCTAATCGAACCG
Downstream 100 bases:
>100_bases GCGCGGTCAACGCATGGCGGAGGAGAGATGCATGCCGGGAACAGGTTAGGCGTCAGCGCGCACCAATACGTTGATGTCGC AGCCAGAAACCGGCAAAATC
Product: tyramine oxidase
Products: NA
Alternate protein names: Copper amine oxidase; MAOXI [H]
Number of amino acids: Translated: 667; Mature: 667
Protein sequence:
>667_residues MESNVQDITAAATAVVHPLDPLTSDEIAAACRPVHAAAVSAEHCRFPIVRLEEPAKAELIACERGQALPRRAFVVSLDIA SGESVEHVVDLGRGEIVARKVVPNREAPYGQPPVMLEEFFRCEAAVKADAGWRKAMHRRGLTDKDIELVQVDPFSSGFFD LPFERGARIVRAVSYFREHPQDNGYAHPIEGVVAVVDLIAGKVIDLTDQDPVIPIPRKKRNYGAHEVTSPRTGIKPLDIE QPQGPSFTVDGWKVDWQKWSFRVGFTPREGLVLHRLCYQDGERTRPIIHRASVTEMVVPYADPTANHFWKSAFDAGEYGL GMLANALELGCDCLGNIHYFDVPAADSKGEPFVMQNAICMHEEDYGVLWKHYEFRNGLFEVRRSRRLVISFFATVGNYDY GFYWYLYQDGTIQLECKLTGIIQTAAVAPGATYPWGGMVDDNLGGPTHQHFFNARLHMDIDGGGNTVTEHEFVPRPWGGD NPHGNVFDTTSRVLARERDAARLANGETGRYWKISNPNAKNSVGGAPGYKLIVNPSPVMLAQEGSFVRSRGGFATKHVWV TAYDPAEKYASGDYPNVHGGGDGLPRYIAQNRSIENTDIVVWHSFGHTHVCKPEDFPIMPVEYAGFLLKPVGFFAANAGF DIPAERNAKSVLSADGTSGTEGGSCCH
Sequences:
>Translated_667_residues MESNVQDITAAATAVVHPLDPLTSDEIAAACRPVHAAAVSAEHCRFPIVRLEEPAKAELIACERGQALPRRAFVVSLDIA SGESVEHVVDLGRGEIVARKVVPNREAPYGQPPVMLEEFFRCEAAVKADAGWRKAMHRRGLTDKDIELVQVDPFSSGFFD LPFERGARIVRAVSYFREHPQDNGYAHPIEGVVAVVDLIAGKVIDLTDQDPVIPIPRKKRNYGAHEVTSPRTGIKPLDIE QPQGPSFTVDGWKVDWQKWSFRVGFTPREGLVLHRLCYQDGERTRPIIHRASVTEMVVPYADPTANHFWKSAFDAGEYGL GMLANALELGCDCLGNIHYFDVPAADSKGEPFVMQNAICMHEEDYGVLWKHYEFRNGLFEVRRSRRLVISFFATVGNYDY GFYWYLYQDGTIQLECKLTGIIQTAAVAPGATYPWGGMVDDNLGGPTHQHFFNARLHMDIDGGGNTVTEHEFVPRPWGGD NPHGNVFDTTSRVLARERDAARLANGETGRYWKISNPNAKNSVGGAPGYKLIVNPSPVMLAQEGSFVRSRGGFATKHVWV TAYDPAEKYASGDYPNVHGGGDGLPRYIAQNRSIENTDIVVWHSFGHTHVCKPEDFPIMPVEYAGFLLKPVGFFAANAGF DIPAERNAKSVLSADGTSGTEGGSCCH >Mature_667_residues MESNVQDITAAATAVVHPLDPLTSDEIAAACRPVHAAAVSAEHCRFPIVRLEEPAKAELIACERGQALPRRAFVVSLDIA SGESVEHVVDLGRGEIVARKVVPNREAPYGQPPVMLEEFFRCEAAVKADAGWRKAMHRRGLTDKDIELVQVDPFSSGFFD LPFERGARIVRAVSYFREHPQDNGYAHPIEGVVAVVDLIAGKVIDLTDQDPVIPIPRKKRNYGAHEVTSPRTGIKPLDIE QPQGPSFTVDGWKVDWQKWSFRVGFTPREGLVLHRLCYQDGERTRPIIHRASVTEMVVPYADPTANHFWKSAFDAGEYGL GMLANALELGCDCLGNIHYFDVPAADSKGEPFVMQNAICMHEEDYGVLWKHYEFRNGLFEVRRSRRLVISFFATVGNYDY GFYWYLYQDGTIQLECKLTGIIQTAAVAPGATYPWGGMVDDNLGGPTHQHFFNARLHMDIDGGGNTVTEHEFVPRPWGGD NPHGNVFDTTSRVLARERDAARLANGETGRYWKISNPNAKNSVGGAPGYKLIVNPSPVMLAQEGSFVRSRGGFATKHVWV TAYDPAEKYASGDYPNVHGGGDGLPRYIAQNRSIENTDIVVWHSFGHTHVCKPEDFPIMPVEYAGFLLKPVGFFAANAGF DIPAERNAKSVLSADGTSGTEGGSCCH
Specific function: The exact function of maoXI is not known [H]
COG id: COG3733
COG function: function code Q; Cu2+-containing amine oxidase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the copper/topaquinone oxidase family [H]
Homologues:
Organism=Homo sapiens, GI73486661, Length=471, Percent_Identity=26.7515923566879, Blast_Score=111, Evalue=3e-24, Organism=Homo sapiens, GI60498982, Length=409, Percent_Identity=27.3838630806846, Blast_Score=110, Evalue=6e-24, Organism=Homo sapiens, GI60498984, Length=414, Percent_Identity=27.536231884058, Blast_Score=109, Evalue=9e-24, Organism=Homo sapiens, GI4502119, Length=413, Percent_Identity=25.90799031477, Blast_Score=105, Evalue=1e-22, Organism=Escherichia coli, GI1787651, Length=637, Percent_Identity=32.0251177394035, Blast_Score=329, Evalue=4e-91,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000269 - InterPro: IPR015798 - InterPro: IPR016182 - InterPro: IPR015800 - InterPro: IPR015801 - InterPro: IPR015802 [H]
Pfam domain/function: PF01179 Cu_amine_oxid; PF02727 Cu_amine_oxidN2; PF02728 Cu_amine_oxidN3 [H]
EC number: =1.4.3.21 [H]
Molecular weight: Translated: 73595; Mature: 73595
Theoretical pI: Translated: 6.21; Mature: 6.21
Prosite motif: PS01164 COPPER_AMINE_OXID_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESNVQDITAAATAVVHPLDPLTSDEIAAACRPVHAAAVSAEHCRFPIVRLEEPAKAELI CCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHCCHHHCCCCEEEECCCCCCEEE ACERGQALPRRAFVVSLDIASGESVEHVVDLGRGEIVARKVVPNREAPYGQPPVMLEEFF EECCCCCCCCEEEEEEEECCCCCCHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHH RCEAAVKADAGWRKAMHRRGLTDKDIELVQVDPFSSGFFDLPFERGARIVRAVSYFREHP HHHHHHCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCEECCHHHHHHHHHHHHHHHHCC QDNGYAHPIEGVVAVVDLIAGKVIDLTDQDPVIPIPRKKRNYGAHEVTSPRTGIKPLDIE CCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QPQGPSFTVDGWKVDWQKWSFRVGFTPREGLVLHRLCYQDGERTRPIIHRASVTEMVVPY CCCCCCEEECCEEEECEEEEEEECCCCCCCHHHHHHHHCCCCCCCCEEEECCHHEEEEEC ADPTANHFWKSAFDAGEYGLGMLANALELGCDCLGNIHYFDVPAADSKGEPFVMQNAICM CCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCEEEECEEEE HEEDYGVLWKHYEFRNGLFEVRRSRRLVISFFATVGNYDYGFYWYLYQDGTIQLECKLTG ECCCCCEEEEHHHHHHHHHHHHHCCCEEEEEEHHHCCCCCEEEEEEEECCEEEEEEEEEE IIQTAAVAPGATYPWGGMVDDNLGGPTHQHFFNARLHMDIDGGGNTVTEHEFVPRPWGGD EEEEHHCCCCCCCCCCCCCCCCCCCCCHHHEEEEEEEEEECCCCCCCCCCCCCCCCCCCC NPHGNVFDTTSRVLARERDAARLANGETGRYWKISNPNAKNSVGGAPGYKLIVNPSPVML CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCEEEECCCCEEE AQEGSFVRSRGGFATKHVWVTAYDPAEKYASGDYPNVHGGGDGLPRYIAQNRSIENTDIV ECCCCEEECCCCEEEEEEEEEEECCHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEE VWHSFGHTHVCKPEDFPIMPVEYAGFLLKPVGFFAANAGFDIPAERNAKSVLSADGTSGT EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHCCCCCCCC EGGSCCH CCCCCCC >Mature Secondary Structure MESNVQDITAAATAVVHPLDPLTSDEIAAACRPVHAAAVSAEHCRFPIVRLEEPAKAELI CCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHCCHHHCCCCEEEECCCCCCEEE ACERGQALPRRAFVVSLDIASGESVEHVVDLGRGEIVARKVVPNREAPYGQPPVMLEEFF EECCCCCCCCEEEEEEEECCCCCCHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHH RCEAAVKADAGWRKAMHRRGLTDKDIELVQVDPFSSGFFDLPFERGARIVRAVSYFREHP HHHHHHCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCEECCHHHHHHHHHHHHHHHHCC QDNGYAHPIEGVVAVVDLIAGKVIDLTDQDPVIPIPRKKRNYGAHEVTSPRTGIKPLDIE CCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QPQGPSFTVDGWKVDWQKWSFRVGFTPREGLVLHRLCYQDGERTRPIIHRASVTEMVVPY CCCCCCEEECCEEEECEEEEEEECCCCCCCHHHHHHHHCCCCCCCCEEEECCHHEEEEEC ADPTANHFWKSAFDAGEYGLGMLANALELGCDCLGNIHYFDVPAADSKGEPFVMQNAICM CCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCEEEECEEEE HEEDYGVLWKHYEFRNGLFEVRRSRRLVISFFATVGNYDYGFYWYLYQDGTIQLECKLTG ECCCCCEEEEHHHHHHHHHHHHHCCCEEEEEEHHHCCCCCEEEEEEEECCEEEEEEEEEE IIQTAAVAPGATYPWGGMVDDNLGGPTHQHFFNARLHMDIDGGGNTVTEHEFVPRPWGGD EEEEHHCCCCCCCCCCCCCCCCCCCCCHHHEEEEEEEEEECCCCCCCCCCCCCCCCCCCC NPHGNVFDTTSRVLARERDAARLANGETGRYWKISNPNAKNSVGGAPGYKLIVNPSPVML CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCEEEECCCCEEE AQEGSFVRSRGGFATKHVWVTAYDPAEKYASGDYPNVHGGGDGLPRYIAQNRSIENTDIV ECCCCEEECCCCEEEEEEEEEEECCHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEE VWHSFGHTHVCKPEDFPIMPVEYAGFLLKPVGFFAANAGFDIPAERNAKSVLSADGTSGT EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHCCCCCCCC EGGSCCH CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8366046 [H]