Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is catD [H]
Identifier: 146343234
GI number: 146343234
Start: 6706835
End: 6707698
Strand: Direct
Name: catD [H]
Synonym: BRADO6453
Alternate gene names: 146343234
Gene position: 6706835-6707698 (Clockwise)
Preceding gene: 146343232
Following gene: 146343236
Centisome position: 89.95
GC content: 68.06
Gene sequence:
>864_bases ATGGGCCATGCAACGGCGCAAGACGGCGTTCGCCTCTATTTTGAAGAGGCCGGCGCCGGCACGCCGCTCCTCTTCCTGCA CGAGTTCGCCGCCGACCACACCAATTGGGAGCCGCAGTTGCGCTACTTCGCGCGCCGTCACCGCTGCATCGCCTACGCGG CGCGCGGCTACACGCCGTCGGACGTGCCGGTCTCGCCTGACGTCTACAGCTACGTGCATTTTTATACAGATGCGCTGGCC GTGCTGGATCACCTCGGCATCGACAGCGCTCACTTCGTCGGGCTGTCGATGGGCTCCTACTCCTCGCTGCAGGTCGCGCT CAACGCGCCGGATCGCATCCGCTCGATGGTGCTGGCCGGCGTCGGCTCCGGCTCCAGCCTCGAGCATCTCGACGCCTTCC GCGCCCAGTGTCGCGCCACCGCCGAACAGTTCGAGACGCTCGGCTCCGTCGAGACCGCGAAGGTCACCCGCGAGGCCCCC GGCCGCATTCCCTTCCTGGTCAAGGACCCGCGCGGCCACGCCGACTTCTACGCCGCCCTCGCCCGCCACGACGCCAAGGG CTCAGCCAACACGATGCGCGGCTTTCAAGGCGGCCGTCCCTCCATCTACACCATGACCGACGCCATTTGCCGCGTCGCCA CGCCGGCCCTGATCATCTGCGGCGACGAGGACGACGCCTGCGTCGCGCCGAGCCTGTTCCTGAAACAGCATCTGCCGGCC TCGGGGCTGATGGTCTTCCCGAAGTCCGGGCACGTGCTGAACCTCGAAGAGCCGGCGCTGTTCAACGAAGCGGTGGAGCG CTTCATCGCGCTGGTGGAGGCCGGTCGGTGGGGGGCGCGTGATCCGAGGTCGATGGCGGGATGA
Upstream 100 bases:
>100_bases CCGGGTTTATTGTTCGGCCAAAATCGTGCCGCACGGCGCTGCATTGTCGCGCAGGGCGCGATCAGTCATGCTCTGGCACG CGAAACGGGAGGAGCTCTCA
Downstream 100 bases:
>100_bases GCGCCGAGCACACGTCCGTCCTTCGCTGGCCATCGACGCCTCGCCACCCGCTTTCGTCCGTGCGAACGCAGGCATTCGCA GGGACGACGGCGGTGTTAGT
Product: alpha/beta superfamily hydrolase
Products: NA
Alternate protein names: 3-oxoadipate enol-lactonase II; Beta-ketoadipate enol-lactone hydrolase II; Enol-lactone hydrolase II [H]
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MGHATAQDGVRLYFEEAGAGTPLLFLHEFAADHTNWEPQLRYFARRHRCIAYAARGYTPSDVPVSPDVYSYVHFYTDALA VLDHLGIDSAHFVGLSMGSYSSLQVALNAPDRIRSMVLAGVGSGSSLEHLDAFRAQCRATAEQFETLGSVETAKVTREAP GRIPFLVKDPRGHADFYAALARHDAKGSANTMRGFQGGRPSIYTMTDAICRVATPALIICGDEDDACVAPSLFLKQHLPA SGLMVFPKSGHVLNLEEPALFNEAVERFIALVEAGRWGARDPRSMAG
Sequences:
>Translated_287_residues MGHATAQDGVRLYFEEAGAGTPLLFLHEFAADHTNWEPQLRYFARRHRCIAYAARGYTPSDVPVSPDVYSYVHFYTDALA VLDHLGIDSAHFVGLSMGSYSSLQVALNAPDRIRSMVLAGVGSGSSLEHLDAFRAQCRATAEQFETLGSVETAKVTREAP GRIPFLVKDPRGHADFYAALARHDAKGSANTMRGFQGGRPSIYTMTDAICRVATPALIICGDEDDACVAPSLFLKQHLPA SGLMVFPKSGHVLNLEEPALFNEAVERFIALVEAGRWGARDPRSMAG >Mature_286_residues GHATAQDGVRLYFEEAGAGTPLLFLHEFAADHTNWEPQLRYFARRHRCIAYAARGYTPSDVPVSPDVYSYVHFYTDALAV LDHLGIDSAHFVGLSMGSYSSLQVALNAPDRIRSMVLAGVGSGSSLEHLDAFRAQCRATAEQFETLGSVETAKVTREAPG RIPFLVKDPRGHADFYAALARHDAKGSANTMRGFQGGRPSIYTMTDAICRVATPALIICGDEDDACVAPSLFLKQHLPAS GLMVFPKSGHVLNLEEPALFNEAVERFIALVEAGRWGARDPRSMAG
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR012790 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.1.1.24 [H]
Molecular weight: Translated: 31171; Mature: 31039
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGHATAQDGVRLYFEEAGAGTPLLFLHEFAADHTNWEPQLRYFARRHRCIAYAARGYTPS CCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHEEEHCCCCCCC DVPVSPDVYSYVHFYTDALAVLDHLGIDSAHFVGLSMGSYSSLQVALNAPDRIRSMVLAG CCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHEEEEECCCCCEEEEEECCHHHHHHHHHHC VGSGSSLEHLDAFRAQCRATAEQFETLGSVETAKVTREAPGRIPFLVKDPRGHADFYAAL CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCEEEECCCCCHHHHHHH ARHDAKGSANTMRGFQGGRPSIYTMTDAICRVATPALIICGDEDDACVAPSLFLKQHLPA HHHCCCCCCHHHHCCCCCCCCEEHHHHHHHHHCCCEEEEECCCCCCEECHHHHHHHCCCC SGLMVFPKSGHVLNLEEPALFNEAVERFIALVEAGRWGARDPRSMAG CCEEEECCCCCEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure GHATAQDGVRLYFEEAGAGTPLLFLHEFAADHTNWEPQLRYFARRHRCIAYAARGYTPS CCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHEEEHCCCCCCC DVPVSPDVYSYVHFYTDALAVLDHLGIDSAHFVGLSMGSYSSLQVALNAPDRIRSMVLAG CCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHEEEEECCCCCEEEEEECCHHHHHHHHHHC VGSGSSLEHLDAFRAQCRATAEQFETLGSVETAKVTREAPGRIPFLVKDPRGHADFYAAL CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCEEEECCCCCHHHHHHH ARHDAKGSANTMRGFQGGRPSIYTMTDAICRVATPALIICGDEDDACVAPSLFLKQHLPA HHHCCCCCCHHHHCCCCCCCCEEHHHHHHHHHCCCEEEEECCCCCCEECHHHHHHHCCCC SGLMVFPKSGHVLNLEEPALFNEAVERFIALVEAGRWGARDPRSMAG CCEEEECCCCCEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8125318; 670169 [H]