Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

Click here to switch to the map view.

The map label for this gene is catD [H]

Identifier: 146343234

GI number: 146343234

Start: 6706835

End: 6707698

Strand: Direct

Name: catD [H]

Synonym: BRADO6453

Alternate gene names: 146343234

Gene position: 6706835-6707698 (Clockwise)

Preceding gene: 146343232

Following gene: 146343236

Centisome position: 89.95

GC content: 68.06

Gene sequence:

>864_bases
ATGGGCCATGCAACGGCGCAAGACGGCGTTCGCCTCTATTTTGAAGAGGCCGGCGCCGGCACGCCGCTCCTCTTCCTGCA
CGAGTTCGCCGCCGACCACACCAATTGGGAGCCGCAGTTGCGCTACTTCGCGCGCCGTCACCGCTGCATCGCCTACGCGG
CGCGCGGCTACACGCCGTCGGACGTGCCGGTCTCGCCTGACGTCTACAGCTACGTGCATTTTTATACAGATGCGCTGGCC
GTGCTGGATCACCTCGGCATCGACAGCGCTCACTTCGTCGGGCTGTCGATGGGCTCCTACTCCTCGCTGCAGGTCGCGCT
CAACGCGCCGGATCGCATCCGCTCGATGGTGCTGGCCGGCGTCGGCTCCGGCTCCAGCCTCGAGCATCTCGACGCCTTCC
GCGCCCAGTGTCGCGCCACCGCCGAACAGTTCGAGACGCTCGGCTCCGTCGAGACCGCGAAGGTCACCCGCGAGGCCCCC
GGCCGCATTCCCTTCCTGGTCAAGGACCCGCGCGGCCACGCCGACTTCTACGCCGCCCTCGCCCGCCACGACGCCAAGGG
CTCAGCCAACACGATGCGCGGCTTTCAAGGCGGCCGTCCCTCCATCTACACCATGACCGACGCCATTTGCCGCGTCGCCA
CGCCGGCCCTGATCATCTGCGGCGACGAGGACGACGCCTGCGTCGCGCCGAGCCTGTTCCTGAAACAGCATCTGCCGGCC
TCGGGGCTGATGGTCTTCCCGAAGTCCGGGCACGTGCTGAACCTCGAAGAGCCGGCGCTGTTCAACGAAGCGGTGGAGCG
CTTCATCGCGCTGGTGGAGGCCGGTCGGTGGGGGGCGCGTGATCCGAGGTCGATGGCGGGATGA

Upstream 100 bases:

>100_bases
CCGGGTTTATTGTTCGGCCAAAATCGTGCCGCACGGCGCTGCATTGTCGCGCAGGGCGCGATCAGTCATGCTCTGGCACG
CGAAACGGGAGGAGCTCTCA

Downstream 100 bases:

>100_bases
GCGCCGAGCACACGTCCGTCCTTCGCTGGCCATCGACGCCTCGCCACCCGCTTTCGTCCGTGCGAACGCAGGCATTCGCA
GGGACGACGGCGGTGTTAGT

Product: alpha/beta superfamily hydrolase

Products: NA

Alternate protein names: 3-oxoadipate enol-lactonase II; Beta-ketoadipate enol-lactone hydrolase II; Enol-lactone hydrolase II [H]

Number of amino acids: Translated: 287; Mature: 286

Protein sequence:

>287_residues
MGHATAQDGVRLYFEEAGAGTPLLFLHEFAADHTNWEPQLRYFARRHRCIAYAARGYTPSDVPVSPDVYSYVHFYTDALA
VLDHLGIDSAHFVGLSMGSYSSLQVALNAPDRIRSMVLAGVGSGSSLEHLDAFRAQCRATAEQFETLGSVETAKVTREAP
GRIPFLVKDPRGHADFYAALARHDAKGSANTMRGFQGGRPSIYTMTDAICRVATPALIICGDEDDACVAPSLFLKQHLPA
SGLMVFPKSGHVLNLEEPALFNEAVERFIALVEAGRWGARDPRSMAG

Sequences:

>Translated_287_residues
MGHATAQDGVRLYFEEAGAGTPLLFLHEFAADHTNWEPQLRYFARRHRCIAYAARGYTPSDVPVSPDVYSYVHFYTDALA
VLDHLGIDSAHFVGLSMGSYSSLQVALNAPDRIRSMVLAGVGSGSSLEHLDAFRAQCRATAEQFETLGSVETAKVTREAP
GRIPFLVKDPRGHADFYAALARHDAKGSANTMRGFQGGRPSIYTMTDAICRVATPALIICGDEDDACVAPSLFLKQHLPA
SGLMVFPKSGHVLNLEEPALFNEAVERFIALVEAGRWGARDPRSMAG
>Mature_286_residues
GHATAQDGVRLYFEEAGAGTPLLFLHEFAADHTNWEPQLRYFARRHRCIAYAARGYTPSDVPVSPDVYSYVHFYTDALAV
LDHLGIDSAHFVGLSMGSYSSLQVALNAPDRIRSMVLAGVGSGSSLEHLDAFRAQCRATAEQFETLGSVETAKVTREAPG
RIPFLVKDPRGHADFYAALARHDAKGSANTMRGFQGGRPSIYTMTDAICRVATPALIICGDEDDACVAPSLFLKQHLPAS
GLMVFPKSGHVLNLEEPALFNEAVERFIALVEAGRWGARDPRSMAG

Specific function: Unknown

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR012790 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: =3.1.1.24 [H]

Molecular weight: Translated: 31171; Mature: 31039

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGHATAQDGVRLYFEEAGAGTPLLFLHEFAADHTNWEPQLRYFARRHRCIAYAARGYTPS
CCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHEEEHCCCCCCC
DVPVSPDVYSYVHFYTDALAVLDHLGIDSAHFVGLSMGSYSSLQVALNAPDRIRSMVLAG
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHEEEEECCCCCEEEEEECCHHHHHHHHHHC
VGSGSSLEHLDAFRAQCRATAEQFETLGSVETAKVTREAPGRIPFLVKDPRGHADFYAAL
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCEEEECCCCCHHHHHHH
ARHDAKGSANTMRGFQGGRPSIYTMTDAICRVATPALIICGDEDDACVAPSLFLKQHLPA
HHHCCCCCCHHHHCCCCCCCCEEHHHHHHHHHCCCEEEEECCCCCCEECHHHHHHHCCCC
SGLMVFPKSGHVLNLEEPALFNEAVERFIALVEAGRWGARDPRSMAG
CCEEEECCCCCEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
GHATAQDGVRLYFEEAGAGTPLLFLHEFAADHTNWEPQLRYFARRHRCIAYAARGYTPS
CCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHEEEHCCCCCCC
DVPVSPDVYSYVHFYTDALAVLDHLGIDSAHFVGLSMGSYSSLQVALNAPDRIRSMVLAG
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHEEEEECCCCCEEEEEECCHHHHHHHHHHC
VGSGSSLEHLDAFRAQCRATAEQFETLGSVETAKVTREAPGRIPFLVKDPRGHADFYAAL
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCEEEECCCCCHHHHHHH
ARHDAKGSANTMRGFQGGRPSIYTMTDAICRVATPALIICGDEDDACVAPSLFLKQHLPA
HHHCCCCCCHHHHCCCCCCCCEEHHHHHHHHHCCCEEEEECCCCCCEECHHHHHHHCCCC
SGLMVFPKSGHVLNLEEPALFNEAVERFIALVEAGRWGARDPRSMAG
CCEEEECCCCCEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8125318; 670169 [H]