Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is ycbX [C]
Identifier: 146343232
GI number: 146343232
Start: 6704970
End: 6705797
Strand: Direct
Name: ycbX [C]
Synonym: BRADO6451
Alternate gene names: 146343232
Gene position: 6704970-6705797 (Clockwise)
Preceding gene: 146343228
Following gene: 146343234
Centisome position: 89.92
GC content: 69.32
Gene sequence:
>828_bases GTGCCCTGGCCGGCGGGTGGGGAATCCCCTATGACCACGGCCATGAACCAGATCAGCCCCGCCCGCATCACCGGCCTGTA CCGCTATCCGGTCAAGGGCCTGACCCCGGAACCGCTGCAGACCGCGCCCTTGCGGCCCGGAGAGACACTGCCGGCAGACC GTCGATACGCGCTGGAGAACGGCCCCACCGGCTTCGATCCGGCGGCCCCGGTGTGGAAGCCGAAGACCGCCTATCTGATG CTGATGCGCAATGAGCGCCTCGCCGGCTTCAAGACCCGCTTCGACGACGCGAGCAACACCCTCACCATCCGCAAAGACGG TGCGATCGTCGCGCAGGGCGATCTCGAGAGCGCCGAAGGCCGTGCCGCCATCGAGCGCTTCTTCGCAACCGAATTCGCCG ACGAACTGCGCGGCCCGGCCCGGCTGCTGTCGGGCGGCGGCTACGCCTTCACCGATCTGGCGCGCAAGGTGATCTCGATC ATCAACCTCGCCTCGGTCGCCGAGGTCGAGCAGATGGTCGGCGCGACCGTGCATCCGCTGCGCTTCCGCGCCAATGTCTA TGTCAGCGGCTGGCCGGCCTGGCACGAAGCGGGGCTGATGGGCGAGACGCTGCGCATCGGCTCGGCGCGGCTGAAGATCG TCAAGACCACCACCCGCTGCGCCGCCGTCAACGTCGACCCCGACACCGCCGCACGCGACCTCGACATCCCGCCGGCGCTG CTGAACCACCGCGGCAACACCGACTGCGGCATCTACGCCGAAGTCATCGAGGGCGGCGACATCGCGGTCGGCGACGAGCT CGCCGTGGAGCAGCCGCGGCTGGTGTAG
Upstream 100 bases:
>100_bases TCAACGCCGCAACTCTCTTGACGTCGCCGAGGTGCACCCGGCTTGGCAAGAAATGTGGGAAGGCGGCCGAAAAACGGAAG GGGCGGCTTCACAAAATCGT
Downstream 100 bases:
>100_bases TTCGAGCGCTCACCGCACCAGCGGTGCGCAACCTCCCCCGCAAGCGGGGGAGGCACAGACCGGGCTTTCCGCGAGGGCTC GCCTCATCAGTTCACAGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: MOSC Domain Containing Protein; Mosc Domain Protein; MOSC Domain Protein; Mosc Domain Containing Protein; Transcriptional Regulator; Mosc Domain; Xylene Monooxygenase Electron Transfer Component
Number of amino acids: Translated: 275; Mature: 274
Protein sequence:
>275_residues MPWPAGGESPMTTAMNQISPARITGLYRYPVKGLTPEPLQTAPLRPGETLPADRRYALENGPTGFDPAAPVWKPKTAYLM LMRNERLAGFKTRFDDASNTLTIRKDGAIVAQGDLESAEGRAAIERFFATEFADELRGPARLLSGGGYAFTDLARKVISI INLASVAEVEQMVGATVHPLRFRANVYVSGWPAWHEAGLMGETLRIGSARLKIVKTTTRCAAVNVDPDTAARDLDIPPAL LNHRGNTDCGIYAEVIEGGDIAVGDELAVEQPRLV
Sequences:
>Translated_275_residues MPWPAGGESPMTTAMNQISPARITGLYRYPVKGLTPEPLQTAPLRPGETLPADRRYALENGPTGFDPAAPVWKPKTAYLM LMRNERLAGFKTRFDDASNTLTIRKDGAIVAQGDLESAEGRAAIERFFATEFADELRGPARLLSGGGYAFTDLARKVISI INLASVAEVEQMVGATVHPLRFRANVYVSGWPAWHEAGLMGETLRIGSARLKIVKTTTRCAAVNVDPDTAARDLDIPPAL LNHRGNTDCGIYAEVIEGGDIAVGDELAVEQPRLV >Mature_274_residues PWPAGGESPMTTAMNQISPARITGLYRYPVKGLTPEPLQTAPLRPGETLPADRRYALENGPTGFDPAAPVWKPKTAYLML MRNERLAGFKTRFDDASNTLTIRKDGAIVAQGDLESAEGRAAIERFFATEFADELRGPARLLSGGGYAFTDLARKVISII NLASVAEVEQMVGATVHPLRFRANVYVSGWPAWHEAGLMGETLRIGSARLKIVKTTTRCAAVNVDPDTAARDLDIPPALL NHRGNTDCGIYAEVIEGGDIAVGDELAVEQPRLV
Specific function: Unknown
COG id: COG3217
COG function: function code R; Uncharacterized Fe-S protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29727; Mature: 29596
Theoretical pI: Translated: 5.82; Mature: 5.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPWPAGGESPMTTAMNQISPARITGLYRYPVKGLTPEPLQTAPLRPGETLPADRRYALEN CCCCCCCCCHHHHHHHHCCCHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCC GPTGFDPAAPVWKPKTAYLMLMRNERLAGFKTRFDDASNTLTIRKDGAIVAQGDLESAEG CCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHCCCCCCCEEEEEECCCEEEECCCCCCCH RAAIERFFATEFADELRGPARLLSGGGYAFTDLARKVISIINLASVAEVEQMVGATVHPL HHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE RFRANVYVSGWPAWHEAGLMGETLRIGSARLKIVKTTTRCAAVNVDPDTAARDLDIPPAL EEEEEEEEECCCCHHHCCCCCCCEEECCEEEEEEEEECEEEEEECCCCCCCCCCCCCHHH LNHRGNTDCGIYAEVIEGGDIAVGDELAVEQPRLV HCCCCCCCCCEEEEEECCCCEEECCCCCCCCCCCC >Mature Secondary Structure PWPAGGESPMTTAMNQISPARITGLYRYPVKGLTPEPLQTAPLRPGETLPADRRYALEN CCCCCCCCHHHHHHHHCCCHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCC GPTGFDPAAPVWKPKTAYLMLMRNERLAGFKTRFDDASNTLTIRKDGAIVAQGDLESAEG CCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHCCCCCCCEEEEEECCCEEEECCCCCCCH RAAIERFFATEFADELRGPARLLSGGGYAFTDLARKVISIINLASVAEVEQMVGATVHPL HHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE RFRANVYVSGWPAWHEAGLMGETLRIGSARLKIVKTTTRCAAVNVDPDTAARDLDIPPAL EEEEEEEEECCCCHHHCCCCCCCEEECCEEEEEEEEECEEEEEECCCCCCCCCCCCCHHH LNHRGNTDCGIYAEVIEGGDIAVGDELAVEQPRLV HCCCCCCCCCEEEEEECCCCEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA