Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

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The map label for this gene is dhmA2 [H]

Identifier: 146343236

GI number: 146343236

Start: 6708815

End: 6709714

Strand: Direct

Name: dhmA2 [H]

Synonym: BRADO6455

Alternate gene names: 146343236

Gene position: 6708815-6709714 (Clockwise)

Preceding gene: 146343234

Following gene: 146343242

Centisome position: 89.97

GC content: 65.11

Gene sequence:

>900_bases
TTGCGTCCGCCCGAGACCTGGAGCGTCCCCATGACCACACAGACCCGACACCGCACCGCGACCGTCCACGGCCGCAAGGT
TTTCTACCGCGAGGCCGGCGACCCCGCCGCGCCGACCATCCTCCTGCTGCACGGCCTGCCCACCAGTAGCCAGATGTTCC
GCGACCTGATTCCGGCGCTCGCCGATCGTTTCCATCTCGTCGCGCCCGACTACATCGGCTTCGGCCACTCGGATGCGCCC
GATCGCCGCGAATTCGCCTACACGTTCGATAATCTCGCTGTCCATGTCGCCGGCCTCGTCGACGTGCTCGGGCTGCAGTC
CTACATTCTGTACATGCAGGACTATGGCGGCCCGGTCGGCTTCCGCCTGTTCACAGAACGTCCCGAGCGGGTGAAGGGCT
TCATCCTGCAGAACACCAATGCCTACATGGAAGGTGTCGGCGAGGCGCCGAAGAAGGTGCTGCTGCCGTTGTGGGAGAAG
CGCACGCCGGAGAGCGAGGCGCCCGCGCGCGAGCTGCTCAGCGTCGACGGTACCAAATTCCAGTGGCTGGTCGGCGCCAG
GGATCCCGAAGCGGTCAATCCCGACAATTGGATTTTCGACCAGGCGCTGCTCGACCGTCCGGGCACCCAGGACTATCAGC
TCGACCTGCTGGAGAACTACAAGACCAACGTCGCGCTCTATCCGCAATGGCAGGCGGCGTTTCGCACGCACCAGCCGAAG
ACGCTGATCGTGTGGGGCCAGCACGACCCGTTCTTCATCCCGCCCGGCGCCCGCGCCTATCTCAACGACCTCTCCGACGT
GAAGCTGTTCTGGCTCGACGCCGGCCACTTCGTCCTCGACGAGAACACACCGAAGGTGGCCGCGGAGATCAAGGCGGTGT
TCGCGGGCGCCTCGCAATAA

Upstream 100 bases:

>100_bases
CCAAGAGACCTTCCATAAAACGAGAGGCTTCTTTCCGAACCTACCGGCTCCCGCTTCTTTTTGGAAGGCATAGAAACCGG
GGACCGGCGGCCGGCGATCG

Downstream 100 bases:

>100_bases
CGATCATGGTCAATCGGGCCATACCACCACAGCTGTCATCGCTCGGCCTTGACCGAGCGATCCAGTATTCCGAGATGACA
GCGGGTCAGCCCGAGAGGCC

Product: alpha/beta superfamily hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MRPPETWSVPMTTQTRHRTATVHGRKVFYREAGDPAAPTILLLHGLPTSSQMFRDLIPALADRFHLVAPDYIGFGHSDAP
DRREFAYTFDNLAVHVAGLVDVLGLQSYILYMQDYGGPVGFRLFTERPERVKGFILQNTNAYMEGVGEAPKKVLLPLWEK
RTPESEAPARELLSVDGTKFQWLVGARDPEAVNPDNWIFDQALLDRPGTQDYQLDLLENYKTNVALYPQWQAAFRTHQPK
TLIVWGQHDPFFIPPGARAYLNDLSDVKLFWLDAGHFVLDENTPKVAAEIKAVFAGASQ

Sequences:

>Translated_299_residues
MRPPETWSVPMTTQTRHRTATVHGRKVFYREAGDPAAPTILLLHGLPTSSQMFRDLIPALADRFHLVAPDYIGFGHSDAP
DRREFAYTFDNLAVHVAGLVDVLGLQSYILYMQDYGGPVGFRLFTERPERVKGFILQNTNAYMEGVGEAPKKVLLPLWEK
RTPESEAPARELLSVDGTKFQWLVGARDPEAVNPDNWIFDQALLDRPGTQDYQLDLLENYKTNVALYPQWQAAFRTHQPK
TLIVWGQHDPFFIPPGARAYLNDLSDVKLFWLDAGHFVLDENTPKVAAEIKAVFAGASQ
>Mature_299_residues
MRPPETWSVPMTTQTRHRTATVHGRKVFYREAGDPAAPTILLLHGLPTSSQMFRDLIPALADRFHLVAPDYIGFGHSDAP
DRREFAYTFDNLAVHVAGLVDVLGLQSYILYMQDYGGPVGFRLFTERPERVKGFILQNTNAYMEGVGEAPKKVLLPLWEK
RTPESEAPARELLSVDGTKFQWLVGARDPEAVNPDNWIFDQALLDRPGTQDYQLDLLENYKTNVALYPQWQAAFRTHQPK
TLIVWGQHDPFFIPPGARAYLNDLSDVKLFWLDAGHFVLDENTPKVAAEIKAVFAGASQ

Specific function: Catalyzes hydrolytic cleavage of carbon-halogen bonds in halogenated aliphatic compounds, leading to the formation of the corresponding primary alcohols, halide ions and protons [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the haloalkane dehalogenase family. Type 1 subfamily [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6324392, Length=289, Percent_Identity=39.1003460207612, Blast_Score=208, Evalue=9e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR000639 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: =3.8.1.5 [H]

Molecular weight: Translated: 33763; Mature: 33763

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPPETWSVPMTTQTRHRTATVHGRKVFYREAGDPAAPTILLLHGLPTSSQMFRDLIPAL
CCCCCCCCCCCCCCCCCEEEEEECCEEEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHH
ADRFHLVAPDYIGFGHSDAPDRREFAYTFDNLAVHVAGLVDVLGLQSYILYMQDYGGPVG
HHCEEEECCCCCCCCCCCCCCCHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
FRLFTERPERVKGFILQNTNAYMEGVGEAPKKVLLPLWEKRTPESEAPARELLSVDGTKF
EEEECCCCCHHEEEEEECCCHHHHCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHCCCCEE
QWLVGARDPEAVNPDNWIFDQALLDRPGTQDYQLDLLENYKTNVALYPQWQAAFRTHQPK
EEEEECCCCCCCCCCCCCHHHHHHCCCCCCCEEEHHHHCCCCCEEEECCHHHHHHCCCCC
TLIVWGQHDPFFIPPGARAYLNDLSDVKLFWLDAGHFVLDENTPKVAAEIKAVFAGASQ
EEEEECCCCCEEECCCCHHHHCCCCCEEEEEEECCCEEECCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRPPETWSVPMTTQTRHRTATVHGRKVFYREAGDPAAPTILLLHGLPTSSQMFRDLIPAL
CCCCCCCCCCCCCCCCCEEEEEECCEEEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHH
ADRFHLVAPDYIGFGHSDAPDRREFAYTFDNLAVHVAGLVDVLGLQSYILYMQDYGGPVG
HHCEEEECCCCCCCCCCCCCCCHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
FRLFTERPERVKGFILQNTNAYMEGVGEAPKKVLLPLWEKRTPESEAPARELLSVDGTKF
EEEECCCCCHHEEEEEECCCHHHHCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHCCCCEE
QWLVGARDPEAVNPDNWIFDQALLDRPGTQDYQLDLLENYKTNVALYPQWQAAFRTHQPK
EEEEECCCCCCCCCCCCCHHHHHHCCCCCCCEEEHHHHCCCCCEEEECCHHHHHHCCCCC
TLIVWGQHDPFFIPPGARAYLNDLSDVKLFWLDAGHFVLDENTPKVAAEIKAVFAGASQ
EEEEECCCCCEEECCCCHHHHCCCCCEEEEEEECCCEEECCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]