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The map label for this gene is yebA [H]

Identifier: 146343228

GI number: 146343228

Start: 6697298

End: 6699349

Strand: Direct

Name: yebA [H]

Synonym: BRADO6447

Alternate gene names: 146343228

Gene position: 6697298-6699349 (Clockwise)

Preceding gene: 146343227

Following gene: 146343232

Centisome position: 89.82

GC content: 67.25

Gene sequence:

>2052_bases
TTGAACCATCGGACGTCACGCGGGGGGATGGCACGCGAGGTCGGCATGATCGATCTCGGTCATGAGCCACCTCTATCAGT
CGATGGCTCCGAGGCCGCGGTGATCGATCGCCGCCGCGTGTCCGTTCAATGGTTTTCAGGCACGATTCTGACCGGTCTCT
GCGGCGCAGCCCTGATCGGCGGCGCCGTTTTCGCGTCGCTCGACGGCGAACTAACCTTTGCGCGCATGCCGGAGCGCGTG
GAGAGTGCGCTGCGCGGCGCGTTCGGCGGCAATGATCGCGTCGCCACGCTGCGCAAGAGCGACCGCCTGCCGCCGCCGAG
CGAAGCCGCCGCCGCGCGCAACGTCGTGCGCGTCTCGACCGTGACCCGCGCCGGAACGCGCGAGGTGATCCGGGTCCGCC
CCTATGTGCGGATCTCGGGCAACCTGTCGATGACCACCAGCGATCTCTCGGCCAAGATTCCGCCGTTCAACGCGCAGCGG
CTTCTGACCGACGCCGACAACGACAAGACCGGGACCGGCGACGATCCCAACAATCCCGCCGCCATCGAGCCGGATGCCGA
GGTGTCCTTCGTCACGAAGGATCTCGCGGCCGTGCTTCCCAAGGCCAAGATCGCAGCCTCGGTGGCGCTCGACGAGATCG
TGATGCGGGTCCGCGATGCCGCCAACTGGCGCGGCAACAATGGTGGCGTGCGCTATGCCTCGCTGGCCAACGCCGCGGCG
GATGCCTCGGGCGCGACGGGCGACCTGAAGCTGGCCTATGCCAGCGACGGCGCAGCGCCGGATCCCTACGCAGGCTTCGA
GACCCGGGTGGTTCCGGAGAATGTCACCCTGCTGCCCAAGACCAAGGAGCAGATCACCGGCGGCAACCCGCTCGGCGAGC
GCGTCCACCTGGTCAAGAAGGGCGACACCGTCGCCTCGATCCTGCGCGACCAGGGCGCCACGCCGGACGAGGCCAAGGCG
ATCGCCGGCCAGCTCGGCCCCCGCGGCCGAGAGGGCGGCCTGAAGGAAGGCGAGAAGCTGCGCATCATGATGGCGCCGGC
GAGCCCTGCTCCCGGCGCGCGCCTGCAGCCGGTCCGCGTCATCGTTGCGAATGACACCATGATCGAAGCCGTCGCGGCGC
TGTCCGACCTCGGCAAATATGTCGCCGTCGACGTGCAGAGCATGAACACGGTGACGGAGACCGCGGACAACACCAACGAC
GACGAGGAGGATGACGGCACCGGCGTCCGCCTCTACCAGAGCATCTACGAGACCGCGCTGCGCAACAAGGTGCCGGCGCC
GGTCATCGAGGACATGATCCGGATCTATTCCTACGACGTCGACTTCCAGCGCCGTGTGCAGCCGGGCGACTCGTTCGACG
TGTTCTATGCCGGCGACGACGACGACAAGCCGGGCACCAACGAGAAGAGCGAGGTGCTGTTCGCATCCCTCACGGTCGGC
GGCGAGACCAAGAAGTACTACCGGTTCCAGACCCCCGACGACAGCGTCGTCGACTATTACGACGAGACCGGCAAGAGCGC
GAAGAAGTTCCTGGTCCGCAAGCCCGTCAACAATGCGATCATGCGCTCCGGCTTCGGCGGCCGCCGCCATCCGATCCTCG
GCTATGTGAAGATGCACACCGGCGTCGACTGGGCCACCGCCTACGGCACGCCGATTTTCGCCGCCGGCAACGGAGTGCTG
GAGAAGGTCGGCACCGAAGGCGGCTACGGCAAGTACATCCGCATCAAGCACAACAACGGCTATGAGACCGCCTACGGCCA
CATGTCGGCATTCGTGAAGGGCATGGAGCCGGGCAAGCGCGTGCGCCAGGGCCAGGTCATCGGCTTCGTCGGCTCGACCG
GTCAGTCGACCGGCCCGCACGTCCATTACGAGATCCTGGTCAACGGCCGCTTCGTCGATCCCTTGCGCGTCAAGCTGCCG
CGCGGCCGCTCGCTCGAGGGCCAGATCATGGCCGGCTTCGAGAAGGAGCGCGACCGCGTCGACCAGATGATGGCTGGCCG
CAACGGCACCGCGCGAATCTCGGACGCCGGCCCGATCCCGGTGAGCCGGTAA

Upstream 100 bases:

>100_bases
CATCATTCCGAGCCGTTTGTCTTAGACGGTATGTCTTGGACGATAAGCCAACCGGCAGCTGAGTGATCTCGGTGCTGACT
TTGAACTTGGGGGACGAAGG

Downstream 100 bases:

>100_bases
GGTGCTGATGGCCTATGCGCCACCAACCTCGCTTAATATTGTCTGATGACTGTACTCTAGACCAATGGCGAAGCCGAGGC
GTGGATATCAGAATTGGTCT

Product: putative metalloendopeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 683; Mature: 683

Protein sequence:

>683_residues
MNHRTSRGGMAREVGMIDLGHEPPLSVDGSEAAVIDRRRVSVQWFSGTILTGLCGAALIGGAVFASLDGELTFARMPERV
ESALRGAFGGNDRVATLRKSDRLPPPSEAAAARNVVRVSTVTRAGTREVIRVRPYVRISGNLSMTTSDLSAKIPPFNAQR
LLTDADNDKTGTGDDPNNPAAIEPDAEVSFVTKDLAAVLPKAKIAASVALDEIVMRVRDAANWRGNNGGVRYASLANAAA
DASGATGDLKLAYASDGAAPDPYAGFETRVVPENVTLLPKTKEQITGGNPLGERVHLVKKGDTVASILRDQGATPDEAKA
IAGQLGPRGREGGLKEGEKLRIMMAPASPAPGARLQPVRVIVANDTMIEAVAALSDLGKYVAVDVQSMNTVTETADNTND
DEEDDGTGVRLYQSIYETALRNKVPAPVIEDMIRIYSYDVDFQRRVQPGDSFDVFYAGDDDDKPGTNEKSEVLFASLTVG
GETKKYYRFQTPDDSVVDYYDETGKSAKKFLVRKPVNNAIMRSGFGGRRHPILGYVKMHTGVDWATAYGTPIFAAGNGVL
EKVGTEGGYGKYIRIKHNNGYETAYGHMSAFVKGMEPGKRVRQGQVIGFVGSTGQSTGPHVHYEILVNGRFVDPLRVKLP
RGRSLEGQIMAGFEKERDRVDQMMAGRNGTARISDAGPIPVSR

Sequences:

>Translated_683_residues
MNHRTSRGGMAREVGMIDLGHEPPLSVDGSEAAVIDRRRVSVQWFSGTILTGLCGAALIGGAVFASLDGELTFARMPERV
ESALRGAFGGNDRVATLRKSDRLPPPSEAAAARNVVRVSTVTRAGTREVIRVRPYVRISGNLSMTTSDLSAKIPPFNAQR
LLTDADNDKTGTGDDPNNPAAIEPDAEVSFVTKDLAAVLPKAKIAASVALDEIVMRVRDAANWRGNNGGVRYASLANAAA
DASGATGDLKLAYASDGAAPDPYAGFETRVVPENVTLLPKTKEQITGGNPLGERVHLVKKGDTVASILRDQGATPDEAKA
IAGQLGPRGREGGLKEGEKLRIMMAPASPAPGARLQPVRVIVANDTMIEAVAALSDLGKYVAVDVQSMNTVTETADNTND
DEEDDGTGVRLYQSIYETALRNKVPAPVIEDMIRIYSYDVDFQRRVQPGDSFDVFYAGDDDDKPGTNEKSEVLFASLTVG
GETKKYYRFQTPDDSVVDYYDETGKSAKKFLVRKPVNNAIMRSGFGGRRHPILGYVKMHTGVDWATAYGTPIFAAGNGVL
EKVGTEGGYGKYIRIKHNNGYETAYGHMSAFVKGMEPGKRVRQGQVIGFVGSTGQSTGPHVHYEILVNGRFVDPLRVKLP
RGRSLEGQIMAGFEKERDRVDQMMAGRNGTARISDAGPIPVSR
>Mature_683_residues
MNHRTSRGGMAREVGMIDLGHEPPLSVDGSEAAVIDRRRVSVQWFSGTILTGLCGAALIGGAVFASLDGELTFARMPERV
ESALRGAFGGNDRVATLRKSDRLPPPSEAAAARNVVRVSTVTRAGTREVIRVRPYVRISGNLSMTTSDLSAKIPPFNAQR
LLTDADNDKTGTGDDPNNPAAIEPDAEVSFVTKDLAAVLPKAKIAASVALDEIVMRVRDAANWRGNNGGVRYASLANAAA
DASGATGDLKLAYASDGAAPDPYAGFETRVVPENVTLLPKTKEQITGGNPLGERVHLVKKGDTVASILRDQGATPDEAKA
IAGQLGPRGREGGLKEGEKLRIMMAPASPAPGARLQPVRVIVANDTMIEAVAALSDLGKYVAVDVQSMNTVTETADNTND
DEEDDGTGVRLYQSIYETALRNKVPAPVIEDMIRIYSYDVDFQRRVQPGDSFDVFYAGDDDDKPGTNEKSEVLFASLTVG
GETKKYYRFQTPDDSVVDYYDETGKSAKKFLVRKPVNNAIMRSGFGGRRHPILGYVKMHTGVDWATAYGTPIFAAGNGVL
EKVGTEGGYGKYIRIKHNNGYETAYGHMSAFVKGMEPGKRVRQGQVIGFVGSTGQSTGPHVHYEILVNGRFVDPLRVKLP
RGRSLEGQIMAGFEKERDRVDQMMAGRNGTARISDAGPIPVSR

Specific function: Could be involved in cell wall degradation or formation [H]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=221, Percent_Identity=34.841628959276, Blast_Score=128, Evalue=1e-30,
Organism=Escherichia coli, GI87082174, Length=103, Percent_Identity=38.8349514563107, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR013731
- InterPro:   IPR016047
- InterPro:   IPR002886
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM; PF08525 OapA_N; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 73345; Mature: 73345

Theoretical pI: Translated: 7.80; Mature: 7.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHRTSRGGMAREVGMIDLGHEPPLSVDGSEAAVIDRRRVSVQWFSGTILTGLCGAALIG
CCCCCCCCCCEEECCEEECCCCCCCCCCCCCEEEEECEEEEEEEECCHHHHHHHHHHHHH
GAVFASLDGELTFARMPERVESALRGAFGGNDRVATLRKSDRLPPPSEAAAARNVVRVST
HHHEEECCCCEEHHHCCHHHHHHHHHCCCCCCCEEEEHHCCCCCCCCHHHHHHCEEEEEE
VTRAGTREVIRVRPYVRISGNLSMTTSDLSAKIPPFNAQRLLTDADNDKTGTGDDPNNPA
HHCCCCCCEEEECCEEEECCCEEEEECCCCCCCCCCCCHHEEECCCCCCCCCCCCCCCCC
AIEPDAEVSFVTKDLAAVLPKAKIAASVALDEIVMRVRDAANWRGNNGGVRYASLANAAA
EECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHC
DASGATGDLKLAYASDGAAPDPYAGFETRVVPENVTLLPKTKEQITGGNPLGERVHLVKK
CCCCCCCCEEEEEECCCCCCCCCCCCEEEECCCCEEECCCCHHHCCCCCCCCCEEEEEEC
GDTVASILRDQGATPDEAKAIAGQLGPRGREGGLKEGEKLRIMMAPASPAPGARLQPVRV
CCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEE
IVANDTMIEAVAALSDLGKYVAVDVQSMNTVTETADNTNDDEEDDGTGVRLYQSIYETAL
EEECCHHHHHHHHHHHCCCEEEEEEHHCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH
RNKVPAPVIEDMIRIYSYDVDFQRRVQPGDSFDVFYAGDDDDKPGTNEKSEVLFASLTVG
HCCCCCHHHHHHHHHHHCCCCHHHHCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEEC
GETKKYYRFQTPDDSVVDYYDETGKSAKKFLVRKPVNNAIMRSGFGGRRHPILGYVKMHT
CCCCEEEEECCCCCHHHHHHHHCCHHHHHHHHHCCCCHHHHHCCCCCCCCCEEEEEEEEC
GVDWATAYGTPIFAAGNGVLEKVGTEGGYGKYIRIKHNNGYETAYGHMSAFVKGMEPGKR
CCCCHHHCCCEEEECCCHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCHHH
VRQGQVIGFVGSTGQSTGPHVHYEILVNGRFVDPLRVKLPRGRSLEGQIMAGFEKERDRV
HCCCCEEEEEECCCCCCCCEEEEEEEECCEEECCCEEECCCCCCCCCCEEECCHHHHHHH
DQMMAGRNGTARISDAGPIPVSR
HHHHHCCCCCEEECCCCCCCCCC
>Mature Secondary Structure
MNHRTSRGGMAREVGMIDLGHEPPLSVDGSEAAVIDRRRVSVQWFSGTILTGLCGAALIG
CCCCCCCCCCEEECCEEECCCCCCCCCCCCCEEEEECEEEEEEEECCHHHHHHHHHHHHH
GAVFASLDGELTFARMPERVESALRGAFGGNDRVATLRKSDRLPPPSEAAAARNVVRVST
HHHEEECCCCEEHHHCCHHHHHHHHHCCCCCCCEEEEHHCCCCCCCCHHHHHHCEEEEEE
VTRAGTREVIRVRPYVRISGNLSMTTSDLSAKIPPFNAQRLLTDADNDKTGTGDDPNNPA
HHCCCCCCEEEECCEEEECCCEEEEECCCCCCCCCCCCHHEEECCCCCCCCCCCCCCCCC
AIEPDAEVSFVTKDLAAVLPKAKIAASVALDEIVMRVRDAANWRGNNGGVRYASLANAAA
EECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHC
DASGATGDLKLAYASDGAAPDPYAGFETRVVPENVTLLPKTKEQITGGNPLGERVHLVKK
CCCCCCCCEEEEEECCCCCCCCCCCCEEEECCCCEEECCCCHHHCCCCCCCCCEEEEEEC
GDTVASILRDQGATPDEAKAIAGQLGPRGREGGLKEGEKLRIMMAPASPAPGARLQPVRV
CCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEEEE
IVANDTMIEAVAALSDLGKYVAVDVQSMNTVTETADNTNDDEEDDGTGVRLYQSIYETAL
EEECCHHHHHHHHHHHCCCEEEEEEHHCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH
RNKVPAPVIEDMIRIYSYDVDFQRRVQPGDSFDVFYAGDDDDKPGTNEKSEVLFASLTVG
HCCCCCHHHHHHHHHHHCCCCHHHHCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEEC
GETKKYYRFQTPDDSVVDYYDETGKSAKKFLVRKPVNNAIMRSGFGGRRHPILGYVKMHT
CCCCEEEEECCCCCHHHHHHHHCCHHHHHHHHHCCCCHHHHHCCCCCCCCCEEEEEEEEC
GVDWATAYGTPIFAAGNGVLEKVGTEGGYGKYIRIKHNNGYETAYGHMSAFVKGMEPGKR
CCCCHHHCCCEEEECCCHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCHHH
VRQGQVIGFVGSTGQSTGPHVHYEILVNGRFVDPLRVKLPRGRSLEGQIMAGFEKERDRV
HCCCCEEEEEECCCCCCCCEEEEEEEECCEEECCCEEECCCCCCCCCCEEECCHHHHHHH
DQMMAGRNGTARISDAGPIPVSR
HHHHHCCCCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]