Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146343216
Identifier: 146343216
GI number: 146343216
Start: 6679304
End: 6680155
Strand: Direct
Name: 146343216
Synonym: BRADO6426
Alternate gene names: NA
Gene position: 6679304-6680155 (Clockwise)
Preceding gene: 146343214
Following gene: 146343217
Centisome position: 89.58
GC content: 67.25
Gene sequence:
>852_bases GTGGGCCGGGTCAGGATCACCAAATTCGCCGAGCTGGAAACGGTCGGCGGCACCCGCTTCATCCTGCCGCAGTCGGCCCC CGAGGCCATCCGCGCGCTGCCCTGGATCACACCGGAGTTCGCCACGGCCGAAGGCAAGCTGAAGATGTCGATCCACACTC TGGTGCTGGAGACCCCGACGCGGCGCATCGTCGTCGACACCGGCCTCGGCAATGACAAGCAGGGCCGCAGCGTGCCGGTG TGGAACGGCCGCAGCACGCCGTTCCTGGAGACGATGAGCGCGGCCGGCTTTCCGCCCGAGAGCATCGACATGGTGATCTG CACGCATCTGCACGTCGACCATGTCGGCTGGAATACGCGGCTGGTCGGCGGCCGCTGGATTCCGACCTTCCCCAACGCAC GCTACGTGTTCGGCCGCACTGAATATGAGCATTGGCGCGATTACAGCGAGGCTGCCGACGAAACCGCGACCTTCGCCGAT TCCGTGCAGCCGGTCGTCGCGGCCGGCAGGGCCGAGCTGGTTGCGAGCGACGCTGTCATCAGCGACGAGATCACGCTGAT CCCGACGCCGGGCCACAGCCCCGGTCATGTCAGCCTGCACATCCGCTCCGGTGGTGCGGAGGCACTGCTGAGCGGCGATG TCGCACATCATCCCTGCCAGATGGCACATCTGGACTGGAGCTCGACCGTCGACTTCAACCCTGCCCAGGCCATCGCCACC CGGCAGGCGCTGTTCTCGCGTTTCGCCGATACCGGCACGCTGGTGATCGGCGGCCATTTCGATGCCGGTCAGATCCGCCG CGACGGCGCGGCGTTCCGCTTTCAGGCAGTGCCGGGCAGCGGCAGCGCATAG
Upstream 100 bases:
>100_bases AACGCGTGTTCCCGCGACTCGATCCATTGCGCTGCGGCGCGCGACGCGGCATCGTCACTTGCAGCGAAGAAACAAGCGGG GAGCGCGCATGCAGTGGACG
Downstream 100 bases:
>100_bases CCCGCAAGGTTGAATTTCGTCCCGCCATGCTCCATGACAGGGCTCTGGAATACCAAGGAACTGAGGGAGAGAAACCAGAT GAAGCTCGTTCGCTACGGCG
Product: putative metallo-beta-lactamase superfamily protein
Products: substituted beta-amino acid
Alternate protein names: Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Family Protein; Beta-Lactamase; Metallo-Beta-Lactamase Superfamily Protein; Beta-Lactamase-Like; Twin-Arginine Translocation Pathway Signal; Beta-Lactamase-Like Protein; Metallo-Beta-Lactamase; Zn-Dependent Hydrolase; Hydrolase; Methyl Parathion Hydrolase; Metal-Dependent Hydrolase; Beta-Lactamase Family Protein; Metal Dependent Hydrolase; Metallo-Beta-Lactamase Superfamily; Zn-Dependent Beta-Lactamase Domain Hydrolase; Metallo-Beta-Lactamase Protein; Zinc-Dependent Hydroxylase; Signal Peptide; Beta-Lactamase-Like Zn-Dependent Hydrolase Protein; Metallo-Beta-Lactamase Domain-Containing Protein; MetaL-Dependent Hydrolase; GloB Protein; Aldehyde Dehydrogenase; LOW QUALITY PROTEIN Beta-Lactamase; Signal Peptide Protein; Beta-Lactamase Class B; Zn-Dependent Hydrolase Including Glyoxylase-Like Protein
Number of amino acids: Translated: 283; Mature: 282
Protein sequence:
>283_residues MGRVRITKFAELETVGGTRFILPQSAPEAIRALPWITPEFATAEGKLKMSIHTLVLETPTRRIVVDTGLGNDKQGRSVPV WNGRSTPFLETMSAAGFPPESIDMVICTHLHVDHVGWNTRLVGGRWIPTFPNARYVFGRTEYEHWRDYSEAADETATFAD SVQPVVAAGRAELVASDAVISDEITLIPTPGHSPGHVSLHIRSGGAEALLSGDVAHHPCQMAHLDWSSTVDFNPAQAIAT RQALFSRFADTGTLVIGGHFDAGQIRRDGAAFRFQAVPGSGSA
Sequences:
>Translated_283_residues MGRVRITKFAELETVGGTRFILPQSAPEAIRALPWITPEFATAEGKLKMSIHTLVLETPTRRIVVDTGLGNDKQGRSVPV WNGRSTPFLETMSAAGFPPESIDMVICTHLHVDHVGWNTRLVGGRWIPTFPNARYVFGRTEYEHWRDYSEAADETATFAD SVQPVVAAGRAELVASDAVISDEITLIPTPGHSPGHVSLHIRSGGAEALLSGDVAHHPCQMAHLDWSSTVDFNPAQAIAT RQALFSRFADTGTLVIGGHFDAGQIRRDGAAFRFQAVPGSGSA >Mature_282_residues GRVRITKFAELETVGGTRFILPQSAPEAIRALPWITPEFATAEGKLKMSIHTLVLETPTRRIVVDTGLGNDKQGRSVPVW NGRSTPFLETMSAAGFPPESIDMVICTHLHVDHVGWNTRLVGGRWIPTFPNARYVFGRTEYEHWRDYSEAADETATFADS VQPVVAAGRAELVASDAVISDEITLIPTPGHSPGHVSLHIRSGGAEALLSGDVAHHPCQMAHLDWSSTVDFNPAQAIATR QALFSRFADTGTLVIGGHFDAGQIRRDGAAFRFQAVPGSGSA
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.5.2.6
Molecular weight: Translated: 30603; Mature: 30472
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRVRITKFAELETVGGTRFILPQSAPEAIRALPWITPEFATAEGKLKMSIHTLVLETPT CCCEEEEEEEEEEECCCEEEEECCCCHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEECCC RRIVVDTGLGNDKQGRSVPVWNGRSTPFLETMSAAGFPPESIDMVICTHLHVDHVGWNTR CEEEEECCCCCCCCCCCCCEECCCCCCHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCEE LVGGRWIPTFPNARYVFGRTEYEHWRDYSEAADETATFADSVQPVVAAGRAELVASDAVI EECCEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHEEECCCEE SDEITLIPTPGHSPGHVSLHIRSGGAEALLSGDVAHHPCQMAHLDWSSTVDFNPAQAIAT CCCEEEEECCCCCCCEEEEEEECCCCCEEEECCCCCCCEEEEECCCCCCCCCCHHHHHHH RQALFSRFADTGTLVIGGHFDAGQIRRDGAAFRFQAVPGSGSA HHHHHHHHCCCCEEEEECCCCCCCEECCCCEEEEEECCCCCCC >Mature Secondary Structure GRVRITKFAELETVGGTRFILPQSAPEAIRALPWITPEFATAEGKLKMSIHTLVLETPT CCEEEEEEEEEEECCCEEEEECCCCHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEECCC RRIVVDTGLGNDKQGRSVPVWNGRSTPFLETMSAAGFPPESIDMVICTHLHVDHVGWNTR CEEEEECCCCCCCCCCCCCEECCCCCCHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCEE LVGGRWIPTFPNARYVFGRTEYEHWRDYSEAADETATFADSVQPVVAAGRAELVASDAVI EECCEECCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHEEECCCEE SDEITLIPTPGHSPGHVSLHIRSGGAEALLSGDVAHHPCQMAHLDWSSTVDFNPAQAIAT CCCEEEEECCCCCCCEEEEEEECCCCCEEEECCCCCCCEEEEECCCCCCCCCCHHHHHHH RQALFSRFADTGTLVIGGHFDAGQIRRDGAAFRFQAVPGSGSA HHHHHHHHCCCCEEEEECCCCCCCEECCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: beta-lactam; H2O
Specific reaction: A beta-lactam + H2O = a substituted beta-amino acid
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA