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The map label for this gene is ycgM [C]

Identifier: 146343217

GI number: 146343217

Start: 6680234

End: 6681076

Strand: Direct

Name: ycgM [C]

Synonym: BRADO6427

Alternate gene names: 146343217

Gene position: 6680234-6681076 (Clockwise)

Preceding gene: 146343216

Following gene: 146343218

Centisome position: 89.59

GC content: 66.55

Gene sequence:

>843_bases
ATGAAGCTCGTTCGCTACGGCGACAAAGGCGCGGAAAAACCGGGCCTGATCGATGCCTCCGGCCAGCTGCGCGACCTGTC
GGCCCACGTGAAGGACCTCGATGGCGCCGCCTATGCGCCGGAGTCCCTGAAGAAGCTCGCCGCGCTCGACCCGGCCTCCC
TGCCCGCCGTCTCCGGCACGCCGCGCCTCGGCGCGCCCGTCACCGGCATCTCGAAATTCGTGGCGATCGGCCTCAACTAC
TCCGATCATGCCAAGGAGACCGGCAACCCGATCCCGGCCGAGCCGATCTTCTTCCTCAAGGCCAACACCTCGCTGTGCGG
CCCCTATGACCAGGTCGAGAAGCCGCGCGGCTCGACCAAGCTCGACTGGGAGGTCGAGATCGCCGCGATCATCGGCACCC
GCGCGAAGTACGTGTCCGAGGCCGACGCGCTGAACCACGTCGCCGGCTATACGATCTGCAACGACGTCTCCGAGCGCAAT
TTCCAGATCGAGCGCCTCGGCCAGTGGACCAAGGGCAAGTCGCACGACACGTTCGGTCCGGTCGGTCCGTGGCTGGTCAC
CAAGGACGAGATTCCGGACGTGCAGAACCTGTCGATGTGGCTCGACGTCAACGGCCAGCGCCGCCAGACCGGCACCACCG
CGACGATGATCTTCTCGATGGCCAAGTGCATCTCCTACGTCTCGCAGTTCATGACGCTGCTGCCGGGCGACATCGTCACC
ACGGGCACGCCTCCGGGCGTCGGCATGGGCATGAAGCCGCCGACCTTCCTCAATGTCGGCGACGTCGTGACGCTCGGCAT
CGAGCGCCTCGGCGAGCAGCGCCAGGAGATCGTCGAGGCGTGA

Upstream 100 bases:

>100_bases
GCCGGGCAGCGGCAGCGCATAGCCCGCAAGGTTGAATTTCGTCCCGCCATGCTCCATGACAGGGCTCTGGAATACCAAGG
AACTGAGGGAGAGAAACCAG

Downstream 100 bases:

>100_bases
TCGTCGAGGCTTAACGTCACCCTCCGTCATTGCGAGCGAAGCGAAGCAATCCAGAGCAACCTCGGGACTCTGGATTGCTT
CGTCGCTTCGCTCCTCGCAA

Product: 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase

Products: NA

Alternate protein names: UGL; Ureidoglycolase; Ureidoglycolatase; Ureidoglycolate hydrolase [H]

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MKLVRYGDKGAEKPGLIDASGQLRDLSAHVKDLDGAAYAPESLKKLAALDPASLPAVSGTPRLGAPVTGISKFVAIGLNY
SDHAKETGNPIPAEPIFFLKANTSLCGPYDQVEKPRGSTKLDWEVEIAAIIGTRAKYVSEADALNHVAGYTICNDVSERN
FQIERLGQWTKGKSHDTFGPVGPWLVTKDEIPDVQNLSMWLDVNGQRRQTGTTATMIFSMAKCISYVSQFMTLLPGDIVT
TGTPPGVGMGMKPPTFLNVGDVVTLGIERLGEQRQEIVEA

Sequences:

>Translated_280_residues
MKLVRYGDKGAEKPGLIDASGQLRDLSAHVKDLDGAAYAPESLKKLAALDPASLPAVSGTPRLGAPVTGISKFVAIGLNY
SDHAKETGNPIPAEPIFFLKANTSLCGPYDQVEKPRGSTKLDWEVEIAAIIGTRAKYVSEADALNHVAGYTICNDVSERN
FQIERLGQWTKGKSHDTFGPVGPWLVTKDEIPDVQNLSMWLDVNGQRRQTGTTATMIFSMAKCISYVSQFMTLLPGDIVT
TGTPPGVGMGMKPPTFLNVGDVVTLGIERLGEQRQEIVEA
>Mature_280_residues
MKLVRYGDKGAEKPGLIDASGQLRDLSAHVKDLDGAAYAPESLKKLAALDPASLPAVSGTPRLGAPVTGISKFVAIGLNY
SDHAKETGNPIPAEPIFFLKANTSLCGPYDQVEKPRGSTKLDWEVEIAAIIGTRAKYVSEADALNHVAGYTICNDVSERN
FQIERLGQWTKGKSHDTFGPVGPWLVTKDEIPDVQNLSMWLDVNGQRRQTGTTATMIFSMAKCISYVSQFMTLLPGDIVT
TGTPPGVGMGMKPPTFLNVGDVVTLGIERLGEQRQEIVEA

Specific function: Unknown

COG id: COG0179

COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAH family [H]

Homologues:

Organism=Homo sapiens, GI156231349, Length=208, Percent_Identity=50.9615384615385, Blast_Score=220, Evalue=1e-57,
Organism=Homo sapiens, GI40786394, Length=208, Percent_Identity=50, Blast_Score=214, Evalue=8e-56,
Organism=Homo sapiens, GI215422413, Length=179, Percent_Identity=40.7821229050279, Blast_Score=140, Evalue=1e-33,
Organism=Homo sapiens, GI66348062, Length=179, Percent_Identity=40.7821229050279, Blast_Score=140, Evalue=1e-33,
Organism=Homo sapiens, GI13654274, Length=179, Percent_Identity=40.7821229050279, Blast_Score=140, Evalue=1e-33,
Organism=Escherichia coli, GI1787428, Length=182, Percent_Identity=38.4615384615385, Blast_Score=134, Evalue=9e-33,
Organism=Caenorhabditis elegans, GI17557057, Length=200, Percent_Identity=37, Blast_Score=135, Evalue=2e-32,
Organism=Saccharomyces cerevisiae, GI6324161, Length=217, Percent_Identity=29.9539170506912, Blast_Score=97, Evalue=3e-21,
Organism=Drosophila melanogaster, GI28572127, Length=290, Percent_Identity=41.7241379310345, Blast_Score=206, Evalue=2e-53,
Organism=Drosophila melanogaster, GI24663695, Length=219, Percent_Identity=36.986301369863, Blast_Score=157, Evalue=5e-39,
Organism=Drosophila melanogaster, GI28571789, Length=204, Percent_Identity=37.2549019607843, Blast_Score=129, Evalue=2e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002529
- InterPro:   IPR011234 [H]

Pfam domain/function: PF01557 FAA_hydrolase [H]

EC number: =4.3.2.3 [H]

Molecular weight: Translated: 30130; Mature: 30130

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLVRYGDKGAEKPGLIDASGQLRDLSAHVKDLDGAAYAPESLKKLAALDPASLPAVSGT
CCEEEECCCCCCCCCEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCC
PRLGAPVTGISKFVAIGLNYSDHAKETGNPIPAEPIFFLKANTSLCGPYDQVEKPRGSTK
CCCCCCHHHHHHHHHCCCCCCHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHCCCCCCC
LDWEVEIAAIIGTRAKYVSEADALNHVAGYTICNDVSERNFQIERLGQWTKGKSHDTFGP
CCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHCCEEHHHHCCCCCCCCCCCCCC
VGPWLVTKDEIPDVQNLSMWLDVNGQRRQTGTTATMIFSMAKCISYVSQFMTLLPGDIVT
CCCEEEECCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
TGTPPGVGMGMKPPTFLNVGDVVTLGIERLGEQRQEIVEA
CCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKLVRYGDKGAEKPGLIDASGQLRDLSAHVKDLDGAAYAPESLKKLAALDPASLPAVSGT
CCEEEECCCCCCCCCEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCC
PRLGAPVTGISKFVAIGLNYSDHAKETGNPIPAEPIFFLKANTSLCGPYDQVEKPRGSTK
CCCCCCHHHHHHHHHCCCCCCHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHCCCCCCC
LDWEVEIAAIIGTRAKYVSEADALNHVAGYTICNDVSERNFQIERLGQWTKGKSHDTFGP
CCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHCCEEHHHHCCCCCCCCCCCCCC
VGPWLVTKDEIPDVQNLSMWLDVNGQRRQTGTTATMIFSMAKCISYVSQFMTLLPGDIVT
CCCEEEECCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
TGTPPGVGMGMKPPTFLNVGDVVTLGIERLGEQRQEIVEA
CCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA