Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
---|---|
Accession | NC_009445 |
Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is ybeT [C]
Identifier: 146343152
GI number: 146343152
Start: 6604754
End: 6605185
Strand: Direct
Name: ybeT [C]
Synonym: BRADO6350
Alternate gene names: 146343152
Gene position: 6604754-6605185 (Clockwise)
Preceding gene: 146343151
Following gene: 146343153
Centisome position: 88.58
GC content: 66.2
Gene sequence:
>432_bases GTGCGAGCGGATTCCGTCAGCGTGGCCCGCAGCGCCTATGCGCGCGGGGATTTCGTGCGCGCGGTTCGCGTACTCACACC ACTGGCGCTGCATGGCGATCCCAGGGCCCAGGCGATGCTCGGCTTCATGTATGAGAACGGCTTCGGCACGCCGCAGGCCT ACGAGGTAGCCAGCGACCTGTATTGCCAGGCCGCGACCGCCGGCAATCCGTTTGGCCAGGCCATGCTCGGCCTGATGTAC GACAAGGGTCATGGCGTTCCGCAGGACGTCGTGCTCGCCTATAAATGGCTGAACCTCGCCGCCGGTCGTGCCAGCCCAGC GCAGCGCAGCTATTATCTGCGCCTGCGCAACGCCGTCGCTTCGAAGATGTCCACCAGCCAGATCGCGCAAGGGCAGGCGC TCGCGCTGAACTGGGCGCCGGGCCAGTTTTAG
Upstream 100 bases:
>100_bases CGCACCACTCGCTGAAACCGTCTCACTCATCCGATCGACCCGTGCGCTCGCCGTGGTCCTGGCCGCAACCGGTCTGCTGG TCGGAGCGGCGGCGTCTCCC
Downstream 100 bases:
>100_bases GCACCGCACCGGCTCGTTCGAGCGGATACGCGCGGGACCTTTGAAGCCGCTCGACGAACGACGCAGGGGATGCGTCGCGG GCTGATCGACTGCGCACCAG
Product: Sel1 repeat-containing protein
Products: NA
Alternate protein names: Sel1 Domain-Containing Protein Repeat-Containing Protein; Sel1 Domain-Containing Protein; TPR Repeat-Containing Protein; Peptidase; Sel1-Like; TPR Repeat Protein; Sel1 Repeat Family; Sel1 Repeat Protein; Sel1 Repeat Family Protein; Signal Peptide; Sel1 Repeat-Containing Protein; Sel1-Like Repeat-Containing Serine/Threonine Protein Kinase; TPR Repeat Protein SEL1 Subfamily; Tyrosine -Like Repeat Protein
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MRADSVSVARSAYARGDFVRAVRVLTPLALHGDPRAQAMLGFMYENGFGTPQAYEVASDLYCQAATAGNPFGQAMLGLMY DKGHGVPQDVVLAYKWLNLAAGRASPAQRSYYLRLRNAVASKMSTSQIAQGQALALNWAPGQF
Sequences:
>Translated_143_residues MRADSVSVARSAYARGDFVRAVRVLTPLALHGDPRAQAMLGFMYENGFGTPQAYEVASDLYCQAATAGNPFGQAMLGLMY DKGHGVPQDVVLAYKWLNLAAGRASPAQRSYYLRLRNAVASKMSTSQIAQGQALALNWAPGQF >Mature_143_residues MRADSVSVARSAYARGDFVRAVRVLTPLALHGDPRAQAMLGFMYENGFGTPQAYEVASDLYCQAATAGNPFGQAMLGLMY DKGHGVPQDVVLAYKWLNLAAGRASPAQRSYYLRLRNAVASKMSTSQIAQGQALALNWAPGQF
Specific function: Unknown
COG id: COG0790
COG function: function code R; FOG: TPR repeat, SEL1 subfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15419; Mature: 15419
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRADSVSVARSAYARGDFVRAVRVLTPLALHGDPRAQAMLGFMYENGFGTPQAYEVASDL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHH YCQAATAGNPFGQAMLGLMYDKGHGVPQDVVLAYKWLNLAAGRASPAQRSYYLRLRNAVA HHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH SKMSTSQIAQGQALALNWAPGQF HHHHHHHHCCCCEEEEECCCCCC >Mature Secondary Structure MRADSVSVARSAYARGDFVRAVRVLTPLALHGDPRAQAMLGFMYENGFGTPQAYEVASDL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHH YCQAATAGNPFGQAMLGLMYDKGHGVPQDVVLAYKWLNLAAGRASPAQRSYYLRLRNAVA HHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH SKMSTSQIAQGQALALNWAPGQF HHHHHHHHCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA