Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

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The map label for this gene is ybeT [C]

Identifier: 146343152

GI number: 146343152

Start: 6604754

End: 6605185

Strand: Direct

Name: ybeT [C]

Synonym: BRADO6350

Alternate gene names: 146343152

Gene position: 6604754-6605185 (Clockwise)

Preceding gene: 146343151

Following gene: 146343153

Centisome position: 88.58

GC content: 66.2

Gene sequence:

>432_bases
GTGCGAGCGGATTCCGTCAGCGTGGCCCGCAGCGCCTATGCGCGCGGGGATTTCGTGCGCGCGGTTCGCGTACTCACACC
ACTGGCGCTGCATGGCGATCCCAGGGCCCAGGCGATGCTCGGCTTCATGTATGAGAACGGCTTCGGCACGCCGCAGGCCT
ACGAGGTAGCCAGCGACCTGTATTGCCAGGCCGCGACCGCCGGCAATCCGTTTGGCCAGGCCATGCTCGGCCTGATGTAC
GACAAGGGTCATGGCGTTCCGCAGGACGTCGTGCTCGCCTATAAATGGCTGAACCTCGCCGCCGGTCGTGCCAGCCCAGC
GCAGCGCAGCTATTATCTGCGCCTGCGCAACGCCGTCGCTTCGAAGATGTCCACCAGCCAGATCGCGCAAGGGCAGGCGC
TCGCGCTGAACTGGGCGCCGGGCCAGTTTTAG

Upstream 100 bases:

>100_bases
CGCACCACTCGCTGAAACCGTCTCACTCATCCGATCGACCCGTGCGCTCGCCGTGGTCCTGGCCGCAACCGGTCTGCTGG
TCGGAGCGGCGGCGTCTCCC

Downstream 100 bases:

>100_bases
GCACCGCACCGGCTCGTTCGAGCGGATACGCGCGGGACCTTTGAAGCCGCTCGACGAACGACGCAGGGGATGCGTCGCGG
GCTGATCGACTGCGCACCAG

Product: Sel1 repeat-containing protein

Products: NA

Alternate protein names: Sel1 Domain-Containing Protein Repeat-Containing Protein; Sel1 Domain-Containing Protein; TPR Repeat-Containing Protein; Peptidase; Sel1-Like; TPR Repeat Protein; Sel1 Repeat Family; Sel1 Repeat Protein; Sel1 Repeat Family Protein; Signal Peptide; Sel1 Repeat-Containing Protein; Sel1-Like Repeat-Containing Serine/Threonine Protein Kinase; TPR Repeat Protein SEL1 Subfamily; Tyrosine -Like Repeat Protein

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MRADSVSVARSAYARGDFVRAVRVLTPLALHGDPRAQAMLGFMYENGFGTPQAYEVASDLYCQAATAGNPFGQAMLGLMY
DKGHGVPQDVVLAYKWLNLAAGRASPAQRSYYLRLRNAVASKMSTSQIAQGQALALNWAPGQF

Sequences:

>Translated_143_residues
MRADSVSVARSAYARGDFVRAVRVLTPLALHGDPRAQAMLGFMYENGFGTPQAYEVASDLYCQAATAGNPFGQAMLGLMY
DKGHGVPQDVVLAYKWLNLAAGRASPAQRSYYLRLRNAVASKMSTSQIAQGQALALNWAPGQF
>Mature_143_residues
MRADSVSVARSAYARGDFVRAVRVLTPLALHGDPRAQAMLGFMYENGFGTPQAYEVASDLYCQAATAGNPFGQAMLGLMY
DKGHGVPQDVVLAYKWLNLAAGRASPAQRSYYLRLRNAVASKMSTSQIAQGQALALNWAPGQF

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15419; Mature: 15419

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRADSVSVARSAYARGDFVRAVRVLTPLALHGDPRAQAMLGFMYENGFGTPQAYEVASDL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHH
YCQAATAGNPFGQAMLGLMYDKGHGVPQDVVLAYKWLNLAAGRASPAQRSYYLRLRNAVA
HHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
SKMSTSQIAQGQALALNWAPGQF
HHHHHHHHCCCCEEEEECCCCCC
>Mature Secondary Structure
MRADSVSVARSAYARGDFVRAVRVLTPLALHGDPRAQAMLGFMYENGFGTPQAYEVASDL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHH
YCQAATAGNPFGQAMLGLMYDKGHGVPQDVVLAYKWLNLAAGRASPAQRSYYLRLRNAVA
HHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
SKMSTSQIAQGQALALNWAPGQF
HHHHHHHHCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA