Click here to switch to the map view.

The map label for this gene is rpmJ

Identifier: 146342954

GI number: 146342954

Start: 6362932

End: 6363057

Strand: Reverse

Name: rpmJ

Synonym: BRADO6137

Alternate gene names: 146342954

Gene position: 6363057-6362932 (Counterclockwise)

Preceding gene: 146342957

Following gene: 146342953

Centisome position: 85.33

GC content: 65.08

Gene sequence:

>126_bases
ATGAAGGTCCGTAACTCGCTGAAGTCGCTGCGTGGCCGCCACCGTGCCAACCGTCTGGTCCGCCGCAAGGGCCGCGTCTA
TGTGATCAACAAGGTCCAGCGCCGCTTCAAGGCGCGCCAGGGCTGA

Upstream 100 bases:

>100_bases
AACCGGCCACTCCGGGCGACCTAGTCGCCAGCGGAAATCCATTCCTATTTGCCACTTCCGGCCTGTCCAACACGGCCTTT
CAAACGCATCAGGATGTCCC

Downstream 100 bases:

>100_bases
TCCCGTAGTTTCCCCCTCGCCATGAGGGGCTTTCTCACAGGTCTTTGAGGCGTGTCCTGCTTTGCAGGACGCGCCGACTG
CGTTTAGACTTGAGGGATGG

Product: 50S ribosomal protein L36

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 41; Mature: 41

Protein sequence:

>41_residues
MKVRNSLKSLRGRHRANRLVRRKGRVYVINKVQRRFKARQG

Sequences:

>Translated_41_residues
MKVRNSLKSLRGRHRANRLVRRKGRVYVINKVQRRFKARQG
>Mature_41_residues
MKVRNSLKSLRGRHRANRLVRRKGRVYVINKVQRRFKARQG

Specific function: Unknown

COG id: COG0257

COG function: function code J; Ribosomal protein L36

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L36P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL36_BRAJA (Q89D92)

Other databases:

- EMBL:   BA000040
- RefSeq:   NP_774188.1
- ProteinModelPortal:   Q89D92
- SMR:   Q89D92
- GeneID:   1047287
- GenomeReviews:   BA000040_GR
- KEGG:   bja:bsl7548
- NMPDR:   fig|224911.1.peg.7548
- HOGENOM:   HBG734088
- ProtClustDB:   PRK00831
- BioCyc:   BJAP224911:BSL7548-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00251
- InterPro:   IPR000473
- TIGRFAMs:   TIGR01022

Pfam domain/function: PF00444 Ribosomal_L36; SSF57840 Ribosomal_L36

EC number: NA

Molecular weight: Translated: 4990; Mature: 4990

Theoretical pI: Translated: 13.16; Mature: 13.16

Prosite motif: PS00828 RIBOSOMAL_L36

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVRNSLKSLRGRHRANRLVRRKGRVYVINKVQRRFKARQG
CCHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHCCC
>Mature Secondary Structure
MKVRNSLKSLRGRHRANRLVRRKGRVYVINKVQRRFKARQG
CCHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12597275