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The map label for this gene is 146342953

Identifier: 146342953

GI number: 146342953

Start: 6362191

End: 6362793

Strand: Reverse

Name: 146342953

Synonym: BRADO6136

Alternate gene names: NA

Gene position: 6362793-6362191 (Counterclockwise)

Preceding gene: 146342954

Following gene: 146342952

Centisome position: 85.33

GC content: 65.34

Gene sequence:

>603_bases
GTGTCCTCGGTTCCGGTTCTTTCGGCTCCGCACCTTGCCTTCGCGCAGGGTGAACCTCGATCGGCCGTCAAGCCCAAGCC
TCCCGAGGCGCCCCCGAAGCTGCCCAAGGTCGGTGCCGACAAGACCAAGGGCCTCGATTTCCTGTTCGGCGCCTTGAAGG
CGGCCCCCGACGAGATCAGCGCCAAGCACGTCGAGGCTCGGATCTGGGCGATCTGGCTGCAGACCCCCAGCGACACCGTC
GCGCTGCTGATGGCGCGGTCCAAGGCCGCGATGGACGCGAAGCAGAACGAGGTCGCGCTCAAGCTGCTGGATTCGGTGAT
CAAGCTGCGGCCCGACTATGTCGAGGCCTGGAACCGCCGGGCCACCATATATTACCTCCAGAACGACTATGGCCGTTCGC
TCTCGGACATCCAGCAGGTGCTGGTCAGGGAGCCGCGGCACTTCGGCGCGCTCGCCGGCCTCGGCATGATCATGCAGGAC
CTCGGCGAGGAAAAACGGGCGCTTGATGCCTTCCGCAAGGCGCTCGACGTCAATCCGCACCTCGAGAAGGTGCCGGAGCT
GGTCAAAACCCTGACCGAGAAGGTCGAGGGCCGCGACATCTAG

Upstream 100 bases:

>100_bases
AGGTCTTTGAGGCGTGTCCTGCTTTGCAGGACGCGCCGACTGCGTTTAGACTTGAGGGATGGTCAAGCGATCCTTGCGGG
CGCTCCTGCTCGCCACCCTT

Downstream 100 bases:

>100_bases
CCGTAACGGCCGATTAACCATGTCTGGACGGCCGTCCTTGCCGGTCCGGCCGCGCGAGCCTAGCTGCCTTGAATCGAGGA
AGGTCGGCAGGAGAGACGCG

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 199

Protein sequence:

>200_residues
MSSVPVLSAPHLAFAQGEPRSAVKPKPPEAPPKLPKVGADKTKGLDFLFGALKAAPDEISAKHVEARIWAIWLQTPSDTV
ALLMARSKAAMDAKQNEVALKLLDSVIKLRPDYVEAWNRRATIYYLQNDYGRSLSDIQQVLVREPRHFGALAGLGMIMQD
LGEEKRALDAFRKALDVNPHLEKVPELVKTLTEKVEGRDI

Sequences:

>Translated_200_residues
MSSVPVLSAPHLAFAQGEPRSAVKPKPPEAPPKLPKVGADKTKGLDFLFGALKAAPDEISAKHVEARIWAIWLQTPSDTV
ALLMARSKAAMDAKQNEVALKLLDSVIKLRPDYVEAWNRRATIYYLQNDYGRSLSDIQQVLVREPRHFGALAGLGMIMQD
LGEEKRALDAFRKALDVNPHLEKVPELVKTLTEKVEGRDI
>Mature_199_residues
SSVPVLSAPHLAFAQGEPRSAVKPKPPEAPPKLPKVGADKTKGLDFLFGALKAAPDEISAKHVEARIWAIWLQTPSDTVA
LLMARSKAAMDAKQNEVALKLLDSVIKLRPDYVEAWNRRATIYYLQNDYGRSLSDIQQVLVREPRHFGALAGLGMIMQDL
GEEKRALDAFRKALDVNPHLEKVPELVKTLTEKVEGRDI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22141; Mature: 22010

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSVPVLSAPHLAFAQGEPRSAVKPKPPEAPPKLPKVGADKTKGLDFLFGALKAAPDEIS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHH
AKHVEARIWAIWLQTPSDTVALLMARSKAAMDAKQNEVALKLLDSVIKLRPDYVEAWNRR
HHHHHEEEEEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHCCC
ATIYYLQNDYGRSLSDIQQVLVREPRHFGALAGLGMIMQDLGEEKRALDAFRKALDVNPH
EEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCH
LEKVPELVKTLTEKVEGRDI
HHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SSVPVLSAPHLAFAQGEPRSAVKPKPPEAPPKLPKVGADKTKGLDFLFGALKAAPDEIS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHH
AKHVEARIWAIWLQTPSDTVALLMARSKAAMDAKQNEVALKLLDSVIKLRPDYVEAWNRR
HHHHHEEEEEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHCCC
ATIYYLQNDYGRSLSDIQQVLVREPRHFGALAGLGMIMQDLGEEKRALDAFRKALDVNPH
EEEEEECCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCH
LEKVPELVKTLTEKVEGRDI
HHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA