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The map label for this gene is ycjP [H]

Identifier: 146342844

GI number: 146342844

Start: 6246248

End: 6247072

Strand: Direct

Name: ycjP [H]

Synonym: BRADO6024

Alternate gene names: 146342844

Gene position: 6246248-6247072 (Clockwise)

Preceding gene: 146342843

Following gene: 146342845

Centisome position: 83.77

GC content: 63.27

Gene sequence:

>825_bases
ATGACCGTCAACACCATCCTCGGCCGGCTCGGCTTGGCGATCGGCGTCTTCCTGATCGTCTCGCCTGCGATCCTGTTCTT
CCTCTGGATGATCTCGCTGTCGGTGAAGTTCGAGGTCGACAACGCCGCCTATCCGCCGGTGTTCTGGCCCGAGCATTTCG
CCTGGAAGAACTACACCGACGTGCTGTCGTCGAACCGCTTCTTCACCTACTTCAAGAACAGCCTGCTGGTGACGGGCGGA
GCGACGGCACTGGCGATGCTGGTCGGCGTCCCCGCCGGCTACGGCATCGCCCGCATGGCCGCGCACAAATCGGCGATCGT
GATCCTGATCGCGCGCATCACGCCGGGCCTGTCCTACCTGATCCCGCTGTTCCTGCTGTTCCAGTGGCTCGGCCTGCTTG
GTACGCTGTGGCCGCAGATCATCATCCATCTGGTGGTCACCGTGCCGATCGTGATCTGGATCATGATCGGATATTTCGAG
ACCACGCCGATCGAGCTCGAGGAGGCCGCGCGGATCGACGGCGCCACGCGCTGGCAGGTTTTCCGCCATGTGGCATTGCC
GGTGGCCAAACCCGGGCTCGCCGTCGCCTTCATCCTCGCGGTGATCTTCTCGTGGAATAATTTCGTGTTCGGCATCGTGC
TCGCGGGACGCGAGACACGCACCTTGCCGGTCGCTGTCTACAACATGATCTCGTTCGATCAGCTGAGCTGGGGCCCGCTC
GCGGCTGCCGCGCTGATCGTGACGCTACCGGTGCTGCTGCTCACAGTCACAGCGCAGCGGCAGATCGTGGCAGGACTCAC
AGCGGGAGCCGTGAAAGGAGGCTGA

Upstream 100 bases:

>100_bases
CGGCGATCGCGGTGGTGTTCTTCGTCCTGATCATCGCGCTCACCGCCCTGCTCCTGGTGCTGCGCCGGCGCGCGCAGTGG
ACTGCGCTGGGGAACGAGGC

Downstream 100 bases:

>100_bases
ATCTGGCAACCCAGCGCGCGTCTTCGCCGTGATCGTTTCCCTATGTGAAATGCCGGAGCAAAGCTGCGGCAAAATGTCGG
GACTGCCTTCGTCAGGCCAC

Product: putative ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MTVNTILGRLGLAIGVFLIVSPAILFFLWMISLSVKFEVDNAAYPPVFWPEHFAWKNYTDVLSSNRFFTYFKNSLLVTGG
ATALAMLVGVPAGYGIARMAAHKSAIVILIARITPGLSYLIPLFLLFQWLGLLGTLWPQIIIHLVVTVPIVIWIMIGYFE
TTPIELEEAARIDGATRWQVFRHVALPVAKPGLAVAFILAVIFSWNNFVFGIVLAGRETRTLPVAVYNMISFDQLSWGPL
AAAALIVTLPVLLLTVTAQRQIVAGLTAGAVKGG

Sequences:

>Translated_274_residues
MTVNTILGRLGLAIGVFLIVSPAILFFLWMISLSVKFEVDNAAYPPVFWPEHFAWKNYTDVLSSNRFFTYFKNSLLVTGG
ATALAMLVGVPAGYGIARMAAHKSAIVILIARITPGLSYLIPLFLLFQWLGLLGTLWPQIIIHLVVTVPIVIWIMIGYFE
TTPIELEEAARIDGATRWQVFRHVALPVAKPGLAVAFILAVIFSWNNFVFGIVLAGRETRTLPVAVYNMISFDQLSWGPL
AAAALIVTLPVLLLTVTAQRQIVAGLTAGAVKGG
>Mature_273_residues
TVNTILGRLGLAIGVFLIVSPAILFFLWMISLSVKFEVDNAAYPPVFWPEHFAWKNYTDVLSSNRFFTYFKNSLLVTGGA
TALAMLVGVPAGYGIARMAAHKSAIVILIARITPGLSYLIPLFLLFQWLGLLGTLWPQIIIHLVVTVPIVIWIMIGYFET
TPIELEEAARIDGATRWQVFRHVALPVAKPGLAVAFILAVIFSWNNFVFGIVLAGRETRTLPVAVYNMISFDQLSWGPLA
AAALIVTLPVLLLTVTAQRQIVAGLTAGAVKGG

Specific function: Probably part of the binding-protein-dependent transport system ycjNOP. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=279, Percent_Identity=30.4659498207885, Blast_Score=124, Evalue=5e-30,
Organism=Escherichia coli, GI1790464, Length=210, Percent_Identity=35.7142857142857, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1787368, Length=232, Percent_Identity=21.9827586206897, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29909; Mature: 29778

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVNTILGRLGLAIGVFLIVSPAILFFLWMISLSVKFEVDNAAYPPVFWPEHFAWKNYTD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCHHH
VLSSNRFFTYFKNSLLVTGGATALAMLVGVPAGYGIARMAAHKSAIVILIARITPGLSYL
HHHCCCEEEEECCCEEEECCHHHHHHHHHCCCCCHHHHHHHCCCEEEEEEEHHCCCHHHH
IPLFLLFQWLGLLGTLWPQIIIHLVVTVPIVIWIMIGYFETTPIELEEAARIDGATRWQV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHH
FRHVALPVAKPGLAVAFILAVIFSWNNFVFGIVLAGRETRTLPVAVYNMISFDQLSWGPL
HHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCHH
AAAALIVTLPVLLLTVTAQRQIVAGLTAGAVKGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TVNTILGRLGLAIGVFLIVSPAILFFLWMISLSVKFEVDNAAYPPVFWPEHFAWKNYTD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCHHH
VLSSNRFFTYFKNSLLVTGGATALAMLVGVPAGYGIARMAAHKSAIVILIARITPGLSYL
HHHCCCEEEEECCCEEEECCHHHHHHHHHCCCCCHHHHHHHCCCEEEEEEEHHCCCHHHH
IPLFLLFQWLGLLGTLWPQIIIHLVVTVPIVIWIMIGYFETTPIELEEAARIDGATRWQV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHH
FRHVALPVAKPGLAVAFILAVIFSWNNFVFGIVLAGRETRTLPVAVYNMISFDQLSWGPL
HHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCHH
AAAALIVTLPVLLLTVTAQRQIVAGLTAGAVKGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]