Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146342845
Identifier: 146342845
GI number: 146342845
Start: 6247386
End: 6248480
Strand: Direct
Name: 146342845
Synonym: BRADO6025
Alternate gene names: NA
Gene position: 6247386-6248480 (Clockwise)
Preceding gene: 146342844
Following gene: 146342854
Centisome position: 83.78
GC content: 67.95
Gene sequence:
>1095_bases ATGACGTCCGATCGCGACGCCCCCGCGCCAGACCACATGACGGCCGTGTTGCAGACCGAACTGCTCGACTCGCCGCCCGA GCCGGGGTTCGACCGCGTCACGCGGCTCACGACACGGCTGCTGCAGGCGCCGGCTTCGATCATCGCGCTGGTCGATCGCG ACCGGCAGTTCTTCAAGAGCTCGGTCGGGCTGTGCGAGCCGTGGGCCTCGCTGCGCGAGACGCCGCTCAGCCATTCGTTC TGTGAGCATGTCGTATCCTCGGCCGCGCCGCTGGTCGTCAACGACGCCAACCAGCTGCCGCTGGTGCGGAACAGCCTGTC GACCGCCAGCCTCTGCATCATCGCCTATCTCGGCGTTCCGCTGCGGCTGCCCGGCGGCGAGGTGATCGGCGCGCTCTGCG CGATCGACTACGTGCCGCGGACCTGGACCGACGACGACATCGCGCAGCTGACCGAGCTCAGCGAGATCGTCATGGACGAG ATCGCGCTGCGCACCGAGAACGCGCGGCGACGCCGAATCGAGCAGCATCAGCGTGTTCTGGTGCATGAACTCAATCATCG CGTGAAGAACACGCTTGCGCTGGTCGACAGCGTGATCGCGCTCAGCATCCGAGCGGATCCAGGACTCGCCGAGTTCGGCG AGGTTCTGCGAAGCCGCATCGCTGCTCTCACCCGCAGTCACGCGCTGGCGCTGGATCGCGGCCGCGAGGCGATCGGTCTC GACGAGCTGGTCCGCGCCGAACTGGCGCCGCTGCAATCCGACCGTGTTGCCGTCGTCGGCCCGGCCGTGCAGCTCGCGCC CGGGATTGCGCTCTATCTCTCCATGGGCCTGCATGAGCTCGTCACCAATGCGGTGAAGTATGGCGCGTTGTCGACCGGGG CCGGGCGTGTGGCGCTGCAATGGACGCACGCAGACGAGCGGCTCAGGCTGTCCTGGCAGGAGAGTGGCGGCCCGCCCGTC ACCCCGCCGGCCCGCAACGGTTTCGGCTCGCTGCTCTTTGAGCGCATTCTCGGTGCGGCGCTGAAGGGCCAGGTGACGCG CGACTTCGCCGCTGACGGACTGAAAGTGACCTTCGATCTGCCGCTGACACCGTGA
Upstream 100 bases:
>100_bases AATATATCGCGTACGCACGATCGACCGGCCGGGATTGGCGCTCCCGTTGGTCTGCCGTGCAAATCTCTCACCGGCTGAAC GCCCGACCGACGAAAGCTTC
Downstream 100 bases:
>100_bases CATCGATCAGCCGCGCTGGCCGCGCCGCCGCGTCAGGGTGATCTCGGCGAGGATCGACATCGCGATCTCTTCCGGCGTGA TGGCGCCAAGGTCGAGCCCT
Product: sensor histidine kinase
Products: NA
Alternate protein names: EL360-LOV-histidine kinase; EL360-LOV-HK [H]
Number of amino acids: Translated: 364; Mature: 363
Protein sequence:
>364_residues MTSDRDAPAPDHMTAVLQTELLDSPPEPGFDRVTRLTTRLLQAPASIIALVDRDRQFFKSSVGLCEPWASLRETPLSHSF CEHVVSSAAPLVVNDANQLPLVRNSLSTASLCIIAYLGVPLRLPGGEVIGALCAIDYVPRTWTDDDIAQLTELSEIVMDE IALRTENARRRRIEQHQRVLVHELNHRVKNTLALVDSVIALSIRADPGLAEFGEVLRSRIAALTRSHALALDRGREAIGL DELVRAELAPLQSDRVAVVGPAVQLAPGIALYLSMGLHELVTNAVKYGALSTGAGRVALQWTHADERLRLSWQESGGPPV TPPARNGFGSLLFERILGAALKGQVTRDFAADGLKVTFDLPLTP
Sequences:
>Translated_364_residues MTSDRDAPAPDHMTAVLQTELLDSPPEPGFDRVTRLTTRLLQAPASIIALVDRDRQFFKSSVGLCEPWASLRETPLSHSF CEHVVSSAAPLVVNDANQLPLVRNSLSTASLCIIAYLGVPLRLPGGEVIGALCAIDYVPRTWTDDDIAQLTELSEIVMDE IALRTENARRRRIEQHQRVLVHELNHRVKNTLALVDSVIALSIRADPGLAEFGEVLRSRIAALTRSHALALDRGREAIGL DELVRAELAPLQSDRVAVVGPAVQLAPGIALYLSMGLHELVTNAVKYGALSTGAGRVALQWTHADERLRLSWQESGGPPV TPPARNGFGSLLFERILGAALKGQVTRDFAADGLKVTFDLPLTP >Mature_363_residues TSDRDAPAPDHMTAVLQTELLDSPPEPGFDRVTRLTTRLLQAPASIIALVDRDRQFFKSSVGLCEPWASLRETPLSHSFC EHVVSSAAPLVVNDANQLPLVRNSLSTASLCIIAYLGVPLRLPGGEVIGALCAIDYVPRTWTDDDIAQLTELSEIVMDEI ALRTENARRRRIEQHQRVLVHELNHRVKNTLALVDSVIALSIRADPGLAEFGEVLRSRIAALTRSHALALDRGREAIGLD ELVRAELAPLQSDRVAVVGPAVQLAPGIALYLSMGLHELVTNAVKYGALSTGAGRVALQWTHADERLRLSWQESGGPPVT PPARNGFGSLLFERILGAALKGQVTRDFAADGLKVTFDLPLTP
Specific function: Photosensitive kinase that is involved in increased bacterial virulence upon exposure to light [H]
COG id: COG3920
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR011102 [H]
Pfam domain/function: PF07536 HWE_HK; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 39502; Mature: 39371
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSDRDAPAPDHMTAVLQTELLDSPPEPGFDRVTRLTTRLLQAPASIIALVDRDRQFFKS CCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH SVGLCEPWASLRETPLSHSFCEHVVSSAAPLVVNDANQLPLVRNSLSTASLCIIAYLGVP CCCCCCHHHHHHCCCCCHHHHHHHHHCCCCEEEECCCCCCHHHHCCHHHHHHHHHHHCCC LRLPGGEVIGALCAIDYVPRTWTDDDIAQLTELSEIVMDEIALRTENARRRRIEQHQRVL EECCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH VHELNHRVKNTLALVDSVIALSIRADPGLAEFGEVLRSRIAALTRSHALALDRGREAIGL HHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH DELVRAELAPLQSDRVAVVGPAVQLAPGIALYLSMGLHELVTNAVKYGALSTGAGRVALQ HHHHHHHHCCCCCCCEEEECCHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE WTHADERLRLSWQESGGPPVTPPARNGFGSLLFERILGAALKGQVTRDFAADGLKVTFDL EECCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCEEEEEEC PLTP CCCC >Mature Secondary Structure TSDRDAPAPDHMTAVLQTELLDSPPEPGFDRVTRLTTRLLQAPASIIALVDRDRQFFKS CCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH SVGLCEPWASLRETPLSHSFCEHVVSSAAPLVVNDANQLPLVRNSLSTASLCIIAYLGVP CCCCCCHHHHHHCCCCCHHHHHHHHHCCCCEEEECCCCCCHHHHCCHHHHHHHHHHHCCC LRLPGGEVIGALCAIDYVPRTWTDDDIAQLTELSEIVMDEIALRTENARRRRIEQHQRVL EECCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH VHELNHRVKNTLALVDSVIALSIRADPGLAEFGEVLRSRIAALTRSHALALDRGREAIGL HHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH DELVRAELAPLQSDRVAVVGPAVQLAPGIALYLSMGLHELVTNAVKYGALSTGAGRVALQ HHHHHHHHCCCCCCCEEEECCHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE WTHADERLRLSWQESGGPPVTPPARNGFGSLLFERILGAALKGQVTRDFAADGLKVTFDL EECCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCEEEEEEC PLTP CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA