| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is amiC [H]
Identifier: 146342707
GI number: 146342707
Start: 6092814
End: 6094070
Strand: Reverse
Name: amiC [H]
Synonym: BRADO5874
Alternate gene names: 146342707
Gene position: 6094070-6092814 (Counterclockwise)
Preceding gene: 146342708
Following gene: 146342706
Centisome position: 81.73
GC content: 60.7
Gene sequence:
>1257_bases ATGGCAGTCGATCGACGCAAATTCTTGAAGAGCGGTGCCCTGGCGGGCGGCGCGCTGATTACCTCGCCATGGGTGTTCTC GACCGGCGCGCAGGCGGCCGGCGAGATCAAGGTGGGCGTGCTGTTCTCGCTTACCGGCGGTCTTTCGATCGTCGAGAAGT CGCTGCACGATGCGACGATGATGGCGATCAGCGAGATCAACGCCGCCGGTGGCGTCAAGGGGATGAAAATCTCTGCGATC GCCGAGGATGGCGCATCCGATCCCAAGACGTATAACGAGAAGGCGTCGAAGCTCGTCATCCAGGACAAGGTCCCGACCGT GTTCGGCTCCTATACGTCCGCCAGCCGCAAGGCGGTCCTGCCGGTGTTCGAGAAGCGCAACAATCTCTATTTCTATCCGA CCTATTATGAAGGCTTCGAGTGCTCGAAGAACGTCGTCTATACCGGCGCCGTTCCGAACCAGCAGCTGTCGAACTTCATT CCCTGGATCATCAAGACGCTCGGCAAGAAGAAGTTCTTCATCGTCGGGTCGAACTACATCTATCCGCGCGAGATGGCGAA GGTCTCCAAGATCCTGATCGAGAAGAACGGCGGCGAGTGGATCGCCGACGAATATCTCGAGCTCGGTCATTCTGAATGGG GCTCGATGGTCAACAAGATCAAGAGCTCCGGCTGCGACGTCGTGCTGTCCAACGTGGTCGGCGACTCCGTGATCGCGTTC TATCGCGAGTACAAGAACCAGGGCCTGACCCACGACAAGCTGCCGATCTGCGCGACGGTCACCTCTGAGATCGAGATCGC GGCGATGGGCGCCGAATACGCCGTCGGCTCCTTCACCTCGTTCCCGTACTTCCAGGCGATCGACACCGACCGCAACAAGG CGTTCATCGAGCGCTACCGTAAGTTCGTCAAGGACCCCAAGGCGGTGACGCACCACGCGCTTGAATCGTCGTACTTCCAG GTCTTCCTGTGGAAGCAGGCGGTGGAGAAGGCCGCCGAGATCACGCCGGTGGCGATCCGCGAGGCGGTGAAGGGCCAGGA GTTCGACGCGCCCAACGGCCACGTCAAGATCGAGGCCGAGAACCTGCATACGTACCTGACGCCGCGCATCGCGCAGTGGC TGCCGGACGGGCAGGGCAAGATCATCGATGCGTACAAGGAGCCGGTCATGCCGCTTCCTTACGTCGCCTACGGCGAAACT CCGACGAACCTCTTCTGCACCGGCAAGGGGCTCGACGCGGCCAAGCTGAAAACCTGA
Upstream 100 bases:
>100_bases CGTCGTCGGAGCTCGATCCGCTCTGGGCGATTTTTGGCAACAAGCAGCGTGCTTCGGCGCGAACGAGGACGCGTGCCTGG ACAAACGGGGAGTGTGCGGT
Downstream 100 bases:
>100_bases CGTCAAGGAAACCCTGTCCACCGCGCGCCTCCCTCGCGCGGTGGATGGCGGGAGGCATCTGTCATGCTCGAGGTTCTGTT TATCGGTCTCAGCCTGGGAT
Product: putative aliphatic amidase expression-regulating protein
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 418; Mature: 417
Protein sequence:
>418_residues MAVDRRKFLKSGALAGGALITSPWVFSTGAQAAGEIKVGVLFSLTGGLSIVEKSLHDATMMAISEINAAGGVKGMKISAI AEDGASDPKTYNEKASKLVIQDKVPTVFGSYTSASRKAVLPVFEKRNNLYFYPTYYEGFECSKNVVYTGAVPNQQLSNFI PWIIKTLGKKKFFIVGSNYIYPREMAKVSKILIEKNGGEWIADEYLELGHSEWGSMVNKIKSSGCDVVLSNVVGDSVIAF YREYKNQGLTHDKLPICATVTSEIEIAAMGAEYAVGSFTSFPYFQAIDTDRNKAFIERYRKFVKDPKAVTHHALESSYFQ VFLWKQAVEKAAEITPVAIREAVKGQEFDAPNGHVKIEAENLHTYLTPRIAQWLPDGQGKIIDAYKEPVMPLPYVAYGET PTNLFCTGKGLDAAKLKT
Sequences:
>Translated_418_residues MAVDRRKFLKSGALAGGALITSPWVFSTGAQAAGEIKVGVLFSLTGGLSIVEKSLHDATMMAISEINAAGGVKGMKISAI AEDGASDPKTYNEKASKLVIQDKVPTVFGSYTSASRKAVLPVFEKRNNLYFYPTYYEGFECSKNVVYTGAVPNQQLSNFI PWIIKTLGKKKFFIVGSNYIYPREMAKVSKILIEKNGGEWIADEYLELGHSEWGSMVNKIKSSGCDVVLSNVVGDSVIAF YREYKNQGLTHDKLPICATVTSEIEIAAMGAEYAVGSFTSFPYFQAIDTDRNKAFIERYRKFVKDPKAVTHHALESSYFQ VFLWKQAVEKAAEITPVAIREAVKGQEFDAPNGHVKIEAENLHTYLTPRIAQWLPDGQGKIIDAYKEPVMPLPYVAYGET PTNLFCTGKGLDAAKLKT >Mature_417_residues AVDRRKFLKSGALAGGALITSPWVFSTGAQAAGEIKVGVLFSLTGGLSIVEKSLHDATMMAISEINAAGGVKGMKISAIA EDGASDPKTYNEKASKLVIQDKVPTVFGSYTSASRKAVLPVFEKRNNLYFYPTYYEGFECSKNVVYTGAVPNQQLSNFIP WIIKTLGKKKFFIVGSNYIYPREMAKVSKILIEKNGGEWIADEYLELGHSEWGSMVNKIKSSGCDVVLSNVVGDSVIAFY REYKNQGLTHDKLPICATVTSEIEIAAMGAEYAVGSFTSFPYFQAIDTDRNKAFIERYRKFVKDPKAVTHHALESSYFQV FLWKQAVEKAAEITPVAIREAVKGQEFDAPNGHVKIEAENLHTYLTPRIAQWLPDGQGKIIDAYKEPVMPLPYVAYGETP TNLFCTGKGLDAAKLKT
Specific function: Negatively regulates the expression of the aliphatic amidase operon. AmiC functions by inhibiting the action of AmiR at the protein level. It exhibits protein kinase activity [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000709 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46002; Mature: 45871
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVDRRKFLKSGALAGGALITSPWVFSTGAQAAGEIKVGVLFSLTGGLSIVEKSLHDATM CCCCHHHHHHHCCCCCCEEEECCEEEECCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHH MAISEINAAGGVKGMKISAIAEDGASDPKTYNEKASKLVIQDKVPTVFGSYTSASRKAVL HHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHEEEEECCCCHHHCCCCCCCCCEEC PVFEKRNNLYFYPTYYEGFECSKNVVYTGAVPNQQLSNFIPWIIKTLGKKKFFIVGSNYI HHHHCCCCEEEEECCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCEE YPREMAKVSKILIEKNGGEWIADEYLELGHSEWGSMVNKIKSSGCDVVLSNVVGDSVIAF CHHHHHHHHHHHEECCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHH YREYKNQGLTHDKLPICATVTSEIEIAAMGAEYAVGSFTSFPYFQAIDTDRNKAFIERYR HHHHHHCCCCCCCCCEEEEECCCEEEEEECCCHHCCCCCCCCCEEEECCCCHHHHHHHHH KFVKDPKAVTHHALESSYFQVFLWKQAVEKAAEITPVAIREAVKGQEFDAPNGHVKIEAE HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCEEEEEEC NLHTYLTPRIAQWLPDGQGKIIDAYKEPVMPLPYVAYGETPTNLFCTGKGLDAAKLKT CCEEHHCHHHHHHCCCCCCCEEHHHHCCCCCCCEEEECCCCCCEEEECCCCCHHCCCC >Mature Secondary Structure AVDRRKFLKSGALAGGALITSPWVFSTGAQAAGEIKVGVLFSLTGGLSIVEKSLHDATM CCCHHHHHHHCCCCCCEEEECCEEEECCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHH MAISEINAAGGVKGMKISAIAEDGASDPKTYNEKASKLVIQDKVPTVFGSYTSASRKAVL HHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHEEEEECCCCHHHCCCCCCCCCEEC PVFEKRNNLYFYPTYYEGFECSKNVVYTGAVPNQQLSNFIPWIIKTLGKKKFFIVGSNYI HHHHCCCCEEEEECCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCEE YPREMAKVSKILIEKNGGEWIADEYLELGHSEWGSMVNKIKSSGCDVVLSNVVGDSVIAF CHHHHHHHHHHHEECCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHH YREYKNQGLTHDKLPICATVTSEIEIAAMGAEYAVGSFTSFPYFQAIDTDRNKAFIERYR HHHHHHCCCCCCCCCEEEEECCCEEEEEECCCHHCCCCCCCCCEEEECCCCHHHHHHHHH KFVKDPKAVTHHALESSYFQVFLWKQAVEKAAEITPVAIREAVKGQEFDAPNGHVKIEAE HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCEEEEEEC NLHTYLTPRIAQWLPDGQGKIIDAYKEPVMPLPYVAYGETPTNLFCTGKGLDAAKLKT CCEEHHCHHHHHHCCCCCCCEEHHHHCCCCCCCEEEECCCCCCEEEECCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1907262; 10984043; 1762155; 7813419; 10508151; 10708652 [H]