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The map label for this gene is 146342060

Identifier: 146342060

GI number: 146342060

Start: 5412437

End: 5413720

Strand: Reverse

Name: 146342060

Synonym: BRADO5200

Alternate gene names: NA

Gene position: 5413720-5412437 (Counterclockwise)

Preceding gene: 146342061

Following gene: 146342059

Centisome position: 72.6

GC content: 65.5

Gene sequence:

>1284_bases
ATGAGCGCGCTTGCAGGTCATCCCGGCCCGGCGCTGCTGGCCCGCCGCTGGCGCGATCCGGCGGCGTGGCGGACCACGGT
GGACGTCGTCGCCGTTCTGCTGGCCGCGTCGCTGCCGTGGTCGACCTCGCTGGTGTCCATCCTCGGCGTCGTCATGCTGA
TCACGATGGTGCCGTTTCTCGATCTCGATCGTCTGCTGCAGATCCTGAAGCGGCCGATCTCGCTGGCGCCGATCGCGCTG
TTCGTGCTGGCGCTGGTCGGCACGTTATGGTCGGACGCGGCCTGGGGCGCGCGGCTCTATGCGGTCGGGCCGGCCGCGAA
GCTCCTGGTGCTGCCGGCGCTCCTCTACCACTTCCAGCGATCCGAGCGCGGCCTGTGGGTGTTCACGGCGTTCCTGGCGT
CCTGCGTGCTGATGGTCGTGATGTCCACGGCGGTGGGGTTCAATCCGGCCCTGGCGCTGAAGGCCAACGCGGATCGCGGC
ATCTTCGTGAAGAACTATATCGACCAGGGCCAGGAATTCTCGCTCTGCGCGGTGGCGCTGGCCTATCCGATCGCTCAGCT
GTTGCGCGCGCGCCGTTTCGTGCCGGCGGGCATTCTCACCGCGATCATGATCGCATTCCTGGCCAACATGATCTTCATCG
TGGTCTCGCGCACGGCGCTGGTGACAATTCCGGTCCTGCTCGCTGTGTTCGGCCTGATCCATCTGAAATGGCGGGCCAAC
CTGCTGATCGCCGTGTCGGCTGTGGTGATCGGCTTGGCCGCGTGGTCGGTCTCGCCGCAACTGCAGCAGAAGGTAGCGAC
ATTCACGCAGCAGTATCAGGATTACCGGAACGACCGCGCCGTCACATCGATCGGCGAACGCCTGGAGTTCTGGCGCAAAT
CGCTGCATTTCTTTGCCGACGCACCGGTGATCGGCCATGGCTCGGGCTCGACGCGGCATCTGTTCGAGCTGGCCGCGAGC
GACCGCACTGATCTCGCCGCCGGCACCGTGGTCGGCAATCCGCACAATCAGACGCTCAACGTCGCGGTCCAGTGGGGCAC
GCTCGGCGTGGTCGTTCTCTACGCGATGTGGGCGTTGCATCTCCTGCTGTTCCGCGGCGACGGTCTCGTGCCGTGGATCG
GGCTTCTCGTGGTGGTGCAGAACATCTTCACCTCGCTGTTCAACTCGCACATCTTCGATTTTCACGAGGGGTGGATGTAC
GTCATCGGCGTCGGCGTGGCCGGCGGCATGGTGCTGCGGCTGAGGAAACAGCCTGATGCGGAGCAAGGGGGCGTCGTGCC
ATGA

Upstream 100 bases:

>100_bases
ACGAGGTGGTCGAGGCCGCCGGCGGCGAGGTGCTGTTGATCGACATCCTGAAGGGACACAGCACGACAGCGCTGGTCGAT
CGTGCCCGGAGCGATCAGCG

Downstream 100 bases:

>100_bases
CGCGCCTGTCGCAGCTCACCTCGCGGAACCTGCTGATCGCGGCGCATGACCTTCTGGTGAGCATCGCCGCGCTGTTTGCG
GCGTTCTACATCCGCTTCGA

Product: putative O-antigen ligase (RfaL-like)

Products: NA

Alternate protein names: O-Antigen Ligase; Lipid A Core -O-Antigen Ligase; Lipid A Core

Number of amino acids: Translated: 427; Mature: 426

Protein sequence:

>427_residues
MSALAGHPGPALLARRWRDPAAWRTTVDVVAVLLAASLPWSTSLVSILGVVMLITMVPFLDLDRLLQILKRPISLAPIAL
FVLALVGTLWSDAAWGARLYAVGPAAKLLVLPALLYHFQRSERGLWVFTAFLASCVLMVVMSTAVGFNPALALKANADRG
IFVKNYIDQGQEFSLCAVALAYPIAQLLRARRFVPAGILTAIMIAFLANMIFIVVSRTALVTIPVLLAVFGLIHLKWRAN
LLIAVSAVVIGLAAWSVSPQLQQKVATFTQQYQDYRNDRAVTSIGERLEFWRKSLHFFADAPVIGHGSGSTRHLFELAAS
DRTDLAAGTVVGNPHNQTLNVAVQWGTLGVVVLYAMWALHLLLFRGDGLVPWIGLLVVVQNIFTSLFNSHIFDFHEGWMY
VIGVGVAGGMVLRLRKQPDAEQGGVVP

Sequences:

>Translated_427_residues
MSALAGHPGPALLARRWRDPAAWRTTVDVVAVLLAASLPWSTSLVSILGVVMLITMVPFLDLDRLLQILKRPISLAPIAL
FVLALVGTLWSDAAWGARLYAVGPAAKLLVLPALLYHFQRSERGLWVFTAFLASCVLMVVMSTAVGFNPALALKANADRG
IFVKNYIDQGQEFSLCAVALAYPIAQLLRARRFVPAGILTAIMIAFLANMIFIVVSRTALVTIPVLLAVFGLIHLKWRAN
LLIAVSAVVIGLAAWSVSPQLQQKVATFTQQYQDYRNDRAVTSIGERLEFWRKSLHFFADAPVIGHGSGSTRHLFELAAS
DRTDLAAGTVVGNPHNQTLNVAVQWGTLGVVVLYAMWALHLLLFRGDGLVPWIGLLVVVQNIFTSLFNSHIFDFHEGWMY
VIGVGVAGGMVLRLRKQPDAEQGGVVP
>Mature_426_residues
SALAGHPGPALLARRWRDPAAWRTTVDVVAVLLAASLPWSTSLVSILGVVMLITMVPFLDLDRLLQILKRPISLAPIALF
VLALVGTLWSDAAWGARLYAVGPAAKLLVLPALLYHFQRSERGLWVFTAFLASCVLMVVMSTAVGFNPALALKANADRGI
FVKNYIDQGQEFSLCAVALAYPIAQLLRARRFVPAGILTAIMIAFLANMIFIVVSRTALVTIPVLLAVFGLIHLKWRANL
LIAVSAVVIGLAAWSVSPQLQQKVATFTQQYQDYRNDRAVTSIGERLEFWRKSLHFFADAPVIGHGSGSTRHLFELAASD
RTDLAAGTVVGNPHNQTLNVAVQWGTLGVVVLYAMWALHLLLFRGDGLVPWIGLLVVVQNIFTSLFNSHIFDFHEGWMYV
IGVGVAGGMVLRLRKQPDAEQGGVVP

Specific function: Unknown

COG id: COG3307

COG function: function code M; Lipid A core - O-antigen ligase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46531; Mature: 46399

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSALAGHPGPALLARRWRDPAAWRTTVDVVAVLLAASLPWSTSLVSILGVVMLITMVPFL
CCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC
DLDRLLQILKRPISLAPIALFVLALVGTLWSDAAWGARLYAVGPAAKLLVLPALLYHFQR
CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHH
SERGLWVFTAFLASCVLMVVMSTAVGFNPALALKANADRGIFVKNYIDQGQEFSLCAVAL
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEHHHHCCCCCHHHHHHHH
AYPIAQLLRARRFVPAGILTAIMIAFLANMIFIVVSRTALVTIPVLLAVFGLIHLKWRAN
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLIAVSAVVIGLAAWSVSPQLQQKVATFTQQYQDYRNDRAVTSIGERLEFWRKSLHFFAD
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
APVIGHGSGSTRHLFELAASDRTDLAAGTVVGNPHNQTLNVAVQWGTLGVVVLYAMWALH
CCEEECCCCCHHHHHHHHHCCCCCCCCCCEECCCCCCEEEEEEEECHHHHHHHHHHHHHH
LLLFRGDGLVPWIGLLVVVQNIFTSLFNSHIFDFHEGWMYVIGVGVAGGMVLRLRKQPDA
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEHHHCCEEEEEECCCCC
EQGGVVP
CCCCCCC
>Mature Secondary Structure 
SALAGHPGPALLARRWRDPAAWRTTVDVVAVLLAASLPWSTSLVSILGVVMLITMVPFL
CCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC
DLDRLLQILKRPISLAPIALFVLALVGTLWSDAAWGARLYAVGPAAKLLVLPALLYHFQR
CHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHH
SERGLWVFTAFLASCVLMVVMSTAVGFNPALALKANADRGIFVKNYIDQGQEFSLCAVAL
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEHHHHCCCCCHHHHHHHH
AYPIAQLLRARRFVPAGILTAIMIAFLANMIFIVVSRTALVTIPVLLAVFGLIHLKWRAN
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLIAVSAVVIGLAAWSVSPQLQQKVATFTQQYQDYRNDRAVTSIGERLEFWRKSLHFFAD
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
APVIGHGSGSTRHLFELAASDRTDLAAGTVVGNPHNQTLNVAVQWGTLGVVVLYAMWALH
CCEEECCCCCHHHHHHHHHCCCCCCCCCCEECCCCCCEEEEEEEECHHHHHHHHHHHHHH
LLLFRGDGLVPWIGLLVVVQNIFTSLFNSHIFDFHEGWMYVIGVGVAGGMVLRLRKQPDA
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEHHHCCEEEEEECCCCC
EQGGVVP
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA