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The map label for this gene is epsC [H]

Identifier: 146342059

GI number: 146342059

Start: 5410527

End: 5412440

Strand: Reverse

Name: epsC [H]

Synonym: BRADO5199

Alternate gene names: 146342059

Gene position: 5412440-5410527 (Counterclockwise)

Preceding gene: 146342060

Following gene: 146342056

Centisome position: 72.59

GC content: 66.67

Gene sequence:

>1914_bases
ATGACGCGCCTGTCGCAGCTCACCTCGCGGAACCTGCTGATCGCGGCGCATGACCTTCTGGTGAGCATCGCCGCGCTGTT
TGCGGCGTTCTACATCCGCTTCGAAGGTGCCAGCACGTTCTGGGAGCGGGTGCCGCTGCTACTGCAGATCCTGCCGTACT
TCATCGCCTTCAGCTTCGTCGTCTTCTACTTCTCCAACCTGCTGACCACCAAGTGGCGATTCACGTCGCTGCCGGATGCG
CTCAATATCGTGCGCGTCGCGACCGTGCTGACGCTCGCCTTCCTGGTGCTCGACTACATCATCGTCGCGCCCAACGTCCG
CGGCACTTTCTTCTTCGGCAAGCTCACGATCATCCTGTTCTGGTTCCTGGAGATCTTCGCGCTCAGCGCATTGCGCTTCG
CCTATCGCTATTTTCGCTACACGCGGGTGCGCCGTCACGCGAAGTCGGAGGATGCGGCCCCGGCGCTGCTGATCGGCCGC
GCGGCCGACGCGGAGGTGGTCCTGCGCGGCATCGAGAGCGGCGCGGTCAAGCGGATCTGGCCGATCGGCATTCTCTCGCC
GTCGATGGCCGACCGTGGCCAGTTGATCCGCGGCGTTCCCGTGCTCGGCGGCATCGACGACGTCGAGGATGTGGCGGCCG
ACTTTGCCCGGCGCGACCGGCCGATCGCGCGCGCGCTGATGATGCCCACCGCGTTCGAGCCGGACTGCCATCCGGAGACC
TTCCTGATGCGTGCGCGCCGCTTGCGCCTGATCGTCAGCCGCCTGCCGTCGCTGGAGAGCGGCGATGCGCCCCGTCTCGC
CCCGGTCGCGGTCGAGGATCTGCTGCTGCGGCCAAGCCACAAGATCGACTACGGACGGCTGGAAGCGCTGGTGCGCGGCA
AGGCCGTGGTCGTGACCGGCGGGGGCGGCTCGATCGGCGCCGAGATCTGCCAGCGCGTCGTTGCGTTCGGCGCGGCGCGG
CTGCTCATTCTCGAAAACTCCGAGCCGGCGCTCTATGCGATCACCGAGGCGCTCGCGGCCGATCCCGAGGCGGATGTCGC
CGTCGAGGGGCGCATCGCCGACATCAGGGATCGCGACCGGGTGTTCGCGCTGATCGGCGAGTTCAAGCCTGACCTGGTGT
TCCACGCCGCGGCTCTGAAGCACGTGCCGATCCTGGAGCGTGACTGGAGCGAGGGCGTCAAGACCAACATCTTCGGCTCG
ATCAACGTGGCCGATGCCGCGGTGGCGTCGGGTGCCGAGGCGATGGTGATGATCTCGACAGACAAGGCGATCGAGCCGGT
GTCGATGCTCGGCCTGACCAAGCGCTTCGCCGAGATGTACTGCCAGGCGCTCGACCGTCAGCTCGCCGAGCGGCCCGTTG
GCCGGCCGCCGATGCGGCTGATCTCGGTACGGTTTGGCAATGTGCTGGCGTCGAACGGCTCGGTGGTTCCGAAGTTCAAG
GCGCAGATCGAGGCGGGCGGTCCGGTCACGGTGACGCATCCGGACATGGTGCGCTACTTCATGACCATCCGCGAGGCTTG
CGATCTCGTCATCACCGCGGCCTCGCATGCGCTCCGGCCGCAGCGGCCCGATGTTTCGGTCTACGTGCTGAACATGGGTC
AGCCGGTGCGCATCGTCGAGCTCGCCGAGCGCATGATCCGGCTGTCCGGCCTGCAGCCGGGCTACGACATCGAGATCAAG
TTCACGGGCATTCGTCCGGGCGAGCGGCTGAACGAAATTCTGTTCGCGAGCGAGGAGCCGCCGATCGAGATCGGTGTTGC
CGGCGTCATGGCGGCGACGCCGAACGAGCCGCCGATGCCGACGCTGAAGGGGTGGATAGCGGCGCTCGATCAGGCGATCG
GGCGCAACGATCCGGTGACGATTAAATCGGTCCTGAAGGATGCAGTGCCGGAGTTCGGCTCGACCGCGGCCTGA

Upstream 100 bases:

>100_bases
TTCACGAGGGGTGGATGTACGTCATCGGCGTCGGCGTGGCCGGCGGCATGGTGCTGCGGCTGAGGAAACAGCCTGATGCG
GAGCAAGGGGGCGTCGTGCC

Downstream 100 bases:

>100_bases
GCCGTCAACGGCGAGGCCGTGAGAACCGGCTCAGCACGAAGGCGACGGCGCCGAGACCGAACACGAGCAGGATGACGTCG
GCGACCAGCGATTGCAGCGC

Product: putative polysaccharide biosynthesis protein (capD-like)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 637; Mature: 636

Protein sequence:

>637_residues
MTRLSQLTSRNLLIAAHDLLVSIAALFAAFYIRFEGASTFWERVPLLLQILPYFIAFSFVVFYFSNLLTTKWRFTSLPDA
LNIVRVATVLTLAFLVLDYIIVAPNVRGTFFFGKLTIILFWFLEIFALSALRFAYRYFRYTRVRRHAKSEDAAPALLIGR
AADAEVVLRGIESGAVKRIWPIGILSPSMADRGQLIRGVPVLGGIDDVEDVAADFARRDRPIARALMMPTAFEPDCHPET
FLMRARRLRLIVSRLPSLESGDAPRLAPVAVEDLLLRPSHKIDYGRLEALVRGKAVVVTGGGGSIGAEICQRVVAFGAAR
LLILENSEPALYAITEALAADPEADVAVEGRIADIRDRDRVFALIGEFKPDLVFHAAALKHVPILERDWSEGVKTNIFGS
INVADAAVASGAEAMVMISTDKAIEPVSMLGLTKRFAEMYCQALDRQLAERPVGRPPMRLISVRFGNVLASNGSVVPKFK
AQIEAGGPVTVTHPDMVRYFMTIREACDLVITAASHALRPQRPDVSVYVLNMGQPVRIVELAERMIRLSGLQPGYDIEIK
FTGIRPGERLNEILFASEEPPIEIGVAGVMAATPNEPPMPTLKGWIAALDQAIGRNDPVTIKSVLKDAVPEFGSTAA

Sequences:

>Translated_637_residues
MTRLSQLTSRNLLIAAHDLLVSIAALFAAFYIRFEGASTFWERVPLLLQILPYFIAFSFVVFYFSNLLTTKWRFTSLPDA
LNIVRVATVLTLAFLVLDYIIVAPNVRGTFFFGKLTIILFWFLEIFALSALRFAYRYFRYTRVRRHAKSEDAAPALLIGR
AADAEVVLRGIESGAVKRIWPIGILSPSMADRGQLIRGVPVLGGIDDVEDVAADFARRDRPIARALMMPTAFEPDCHPET
FLMRARRLRLIVSRLPSLESGDAPRLAPVAVEDLLLRPSHKIDYGRLEALVRGKAVVVTGGGGSIGAEICQRVVAFGAAR
LLILENSEPALYAITEALAADPEADVAVEGRIADIRDRDRVFALIGEFKPDLVFHAAALKHVPILERDWSEGVKTNIFGS
INVADAAVASGAEAMVMISTDKAIEPVSMLGLTKRFAEMYCQALDRQLAERPVGRPPMRLISVRFGNVLASNGSVVPKFK
AQIEAGGPVTVTHPDMVRYFMTIREACDLVITAASHALRPQRPDVSVYVLNMGQPVRIVELAERMIRLSGLQPGYDIEIK
FTGIRPGERLNEILFASEEPPIEIGVAGVMAATPNEPPMPTLKGWIAALDQAIGRNDPVTIKSVLKDAVPEFGSTAA
>Mature_636_residues
TRLSQLTSRNLLIAAHDLLVSIAALFAAFYIRFEGASTFWERVPLLLQILPYFIAFSFVVFYFSNLLTTKWRFTSLPDAL
NIVRVATVLTLAFLVLDYIIVAPNVRGTFFFGKLTIILFWFLEIFALSALRFAYRYFRYTRVRRHAKSEDAAPALLIGRA
ADAEVVLRGIESGAVKRIWPIGILSPSMADRGQLIRGVPVLGGIDDVEDVAADFARRDRPIARALMMPTAFEPDCHPETF
LMRARRLRLIVSRLPSLESGDAPRLAPVAVEDLLLRPSHKIDYGRLEALVRGKAVVVTGGGGSIGAEICQRVVAFGAARL
LILENSEPALYAITEALAADPEADVAVEGRIADIRDRDRVFALIGEFKPDLVFHAAALKHVPILERDWSEGVKTNIFGSI
NVADAAVASGAEAMVMISTDKAIEPVSMLGLTKRFAEMYCQALDRQLAERPVGRPPMRLISVRFGNVLASNGSVVPKFKA
QIEAGGPVTVTHPDMVRYFMTIREACDLVITAASHALRPQRPDVSVYVLNMGQPVRIVELAERMIRLSGLQPGYDIEIKF
TGIRPGERLNEILFASEEPPIEIGVAGVMAATPNEPPMPTLKGWIAALDQAIGRNDPVTIKSVLKDAVPEFGSTAA

Specific function: Involved in biofilm formation [H]

COG id: COG1086

COG function: function code MG; Predicted nucleoside-diphosphate sugar epimerases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR003869 [H]

Pfam domain/function: PF02719 Polysacc_synt_2 [H]

EC number: NA

Molecular weight: Translated: 69941; Mature: 69809

Theoretical pI: Translated: 8.30; Mature: 8.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRLSQLTSRNLLIAAHDLLVSIAALFAAFYIRFEGASTFWERVPLLLQILPYFIAFSFV
CCCHHHHHCCCEEEEHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHH
VFYFSNLLTTKWRFTSLPDALNIVRVATVLTLAFLVLDYIIVAPNVRGTFFFGKLTIILF
HHHHHHHHHCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHH
WFLEIFALSALRFAYRYFRYTRVRRHAKSEDAAPALLIGRAADAEVVLRGIESGAVKRIW
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHCCCCCCEEE
PIGILSPSMADRGQLIRGVPVLGGIDDVEDVAADFARRDRPIARALMMPTAFEPDCHPET
EEECCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHH
FLMRARRLRLIVSRLPSLESGDAPRLAPVAVEDLLLRPSHKIDYGRLEALVRGKAVVVTG
HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCEEEEEC
GGGSIGAEICQRVVAFGAARLLILENSEPALYAITEALAADPEADVAVEGRIADIRDRDR
CCCCHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHCCCCCCEEECCCEECCCCCHH
VFALIGEFKPDLVFHAAALKHVPILERDWSEGVKTNIFGSINVADAAVASGAEAMVMIST
HHHHHHCCCCHHHHHHHHHHCCCCCCCCHHCCCCCCCEECCCHHHHHHHCCCCEEEEEEC
DKAIEPVSMLGLTKRFAEMYCQALDRQLAERPVGRPPMRLISVRFGNVLASNGSVVPKFK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEHHCCEEECCCCCCCCHH
AQIEAGGPVTVTHPDMVRYFMTIREACDLVITAASHALRPQRPDVSVYVLNMGQPVRIVE
HEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHH
LAERMIRLSGLQPGYDIEIKFTGIRPGERLNEILFASEEPPIEIGVAGVMAATPNEPPMP
HHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHCCCCCCCEEEEEEEEEEECCCCCCCH
TLKGWIAALDQAIGRNDPVTIKSVLKDAVPEFGSTAA
HHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TRLSQLTSRNLLIAAHDLLVSIAALFAAFYIRFEGASTFWERVPLLLQILPYFIAFSFV
CCHHHHHCCCEEEEHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHH
VFYFSNLLTTKWRFTSLPDALNIVRVATVLTLAFLVLDYIIVAPNVRGTFFFGKLTIILF
HHHHHHHHHCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHH
WFLEIFALSALRFAYRYFRYTRVRRHAKSEDAAPALLIGRAADAEVVLRGIESGAVKRIW
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHCCCCCCEEE
PIGILSPSMADRGQLIRGVPVLGGIDDVEDVAADFARRDRPIARALMMPTAFEPDCHPET
EEECCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHH
FLMRARRLRLIVSRLPSLESGDAPRLAPVAVEDLLLRPSHKIDYGRLEALVRGKAVVVTG
HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCEEEEEC
GGGSIGAEICQRVVAFGAARLLILENSEPALYAITEALAADPEADVAVEGRIADIRDRDR
CCCCHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHCCCCCCEEECCCEECCCCCHH
VFALIGEFKPDLVFHAAALKHVPILERDWSEGVKTNIFGSINVADAAVASGAEAMVMIST
HHHHHHCCCCHHHHHHHHHHCCCCCCCCHHCCCCCCCEECCCHHHHHHHCCCCEEEEEEC
DKAIEPVSMLGLTKRFAEMYCQALDRQLAERPVGRPPMRLISVRFGNVLASNGSVVPKFK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEEHHCCEEECCCCCCCCHH
AQIEAGGPVTVTHPDMVRYFMTIREACDLVITAASHALRPQRPDVSVYVLNMGQPVRIVE
HEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHH
LAERMIRLSGLQPGYDIEIKFTGIRPGERLNEILFASEEPPIEIGVAGVMAATPNEPPMP
HHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHCCCCCCCEEEEEEEEEEECCCCCCCH
TLKGWIAALDQAIGRNDPVTIKSVLKDAVPEFGSTAA
HHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]