Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

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The map label for this gene is capM [H]

Identifier: 146342057

GI number: 146342057

Start: 5408367

End: 5409524

Strand: Direct

Name: capM [H]

Synonym: BRADO5197

Alternate gene names: 146342057

Gene position: 5408367-5409524 (Clockwise)

Preceding gene: 146342053

Following gene: 146342058

Centisome position: 72.53

GC content: 70.98

Gene sequence:

>1158_bases
ATGCCCCCGCCCCACTCCGCTTCGCCGCGCCGCCTGCTCTACGTGGCCAACGAGGATTTCGCGTTCCTGATGCACCGGCT
GCCGATGGCGCGCGCCGCGCGCGATGCCGGCTACGAGGTGCATGTCGCGACCAACGTCAATGCGGGCGCCGCCGCGATCG
CCGCCGAGCGCTTCGTCCTGCATCCGATCCCGTTCCGGCGCGGCGGACTTTCGCCGTCGTCAGCTCTGCCCACGGTCCGA
GCAATCCGCGCCGTGGAAGCGGCGATCCGACCCGACATCGTGCATCATTCGGGGCTGCAGGCGAGCGTGCTCGGCTCGCT
GGCCGCGCTCGGGCGCCCTGCCCCGGTCGTCAACGCCATGACCGGCATGGGCTACATCTTCACGTCGTCGAGCTGGCGCT
CGCGCCTGCTGAAGCGGGGCCTGCTCTCGCTGCTGCCGTGGCTGATGAACCGCCGCCCGAGCTGCGTGCTGGTGCAGAAC
CCCGACGATCGTGATGCCCTTCAGGCGATGGGCGTGCGCGCCGACAAAATCACGCTGATCCCCGGCTCCGGCGTCGACAC
CGACCGCTTCCGGCCGCTGCCGGAGCCCGACGGGCCGATCACCTTCGGCTTCGCCGGACGTCTGCTGACCGACAAGGGCA
TTCGCGCGCTGATCGCGGCGCACCGGATGCTGCGGCAGCAAGGCCGCAACGATCAGCTGCTGATCGCCGGCTCGCCCGAT
CCGGCCAACCCGGCCTCGGTTTCGGCCGCGGAAATCGAGGCTTGGCGCGCAGAGCCCGGCATCACCCTGCTCGGCCAGAT
CAAAGACATCACCGAGCTCTGGCGGCGCTGCCACGTCGCCGTGCTTCCCTCGCATCGCGAGGGACTGCCGGTGAGCCTGC
TGGAGGCTGCCGCCTGCGGCCGGCCGCTGGTCTCGACGGACGCTCCCGGCTGCCGCGAGATCGCGATCCACGGCCAGACC
GGGCTCGCGGTCCTCGTCGAGGATGCCGCCGCGCTCGCGCAAGCGATGGCGCAGCTCGCGACGTCGCCCGAGCTGCGCGC
GCGCTATGGTCAGGCCGCGCGGCAGCTCGTCGAGGACAAGCTCTCGGCCAGGATCATCGGCCGCTCCGTCGTGGCGCTTT
ATGATCGTCTCACCGCGGCCTCAGGCGACCACCAATGA

Upstream 100 bases:

>100_bases
GAACGAAAAGTAAACATCATCTGCCCTAATAACGTACGGCTCGCGTGCAGCCCGGTCTTGGCCTATACGGCGCCAAGACC
GCCCGAGACCCGTGAGTTTG

Downstream 100 bases:

>100_bases
TCGCCAGCCCCGCTGCCAATGCCGCTCTCATCGCCCTGCTGGCCGCGGTGATGTGCGCCGTCTCGATCGTGCTGCTGCGC
CCGCTGCTGCAGCGCTATGC

Product: putative glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 384

Protein sequence:

>385_residues
MPPPHSASPRRLLYVANEDFAFLMHRLPMARAARDAGYEVHVATNVNAGAAAIAAERFVLHPIPFRRGGLSPSSALPTVR
AIRAVEAAIRPDIVHHSGLQASVLGSLAALGRPAPVVNAMTGMGYIFTSSSWRSRLLKRGLLSLLPWLMNRRPSCVLVQN
PDDRDALQAMGVRADKITLIPGSGVDTDRFRPLPEPDGPITFGFAGRLLTDKGIRALIAAHRMLRQQGRNDQLLIAGSPD
PANPASVSAAEIEAWRAEPGITLLGQIKDITELWRRCHVAVLPSHREGLPVSLLEAAACGRPLVSTDAPGCREIAIHGQT
GLAVLVEDAAALAQAMAQLATSPELRARYGQAARQLVEDKLSARIIGRSVVALYDRLTAASGDHQ

Sequences:

>Translated_385_residues
MPPPHSASPRRLLYVANEDFAFLMHRLPMARAARDAGYEVHVATNVNAGAAAIAAERFVLHPIPFRRGGLSPSSALPTVR
AIRAVEAAIRPDIVHHSGLQASVLGSLAALGRPAPVVNAMTGMGYIFTSSSWRSRLLKRGLLSLLPWLMNRRPSCVLVQN
PDDRDALQAMGVRADKITLIPGSGVDTDRFRPLPEPDGPITFGFAGRLLTDKGIRALIAAHRMLRQQGRNDQLLIAGSPD
PANPASVSAAEIEAWRAEPGITLLGQIKDITELWRRCHVAVLPSHREGLPVSLLEAAACGRPLVSTDAPGCREIAIHGQT
GLAVLVEDAAALAQAMAQLATSPELRARYGQAARQLVEDKLSARIIGRSVVALYDRLTAASGDHQ
>Mature_384_residues
PPPHSASPRRLLYVANEDFAFLMHRLPMARAARDAGYEVHVATNVNAGAAAIAAERFVLHPIPFRRGGLSPSSALPTVRA
IRAVEAAIRPDIVHHSGLQASVLGSLAALGRPAPVVNAMTGMGYIFTSSSWRSRLLKRGLLSLLPWLMNRRPSCVLVQNP
DDRDALQAMGVRADKITLIPGSGVDTDRFRPLPEPDGPITFGFAGRLLTDKGIRALIAAHRMLRQQGRNDQLLIAGSPDP
ANPASVSAAEIEAWRAEPGITLLGQIKDITELWRRCHVAVLPSHREGLPVSLLEAAACGRPLVSTDAPGCREIAIHGQTG
LAVLVEDAAALAQAMAQLATSPELRARYGQAARQLVEDKLSARIIGRSVVALYDRLTAASGDHQ

Specific function: Required for the biosynthesis of type 1 capsular polysaccharide [H]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 41227; Mature: 41096

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPPHSASPRRLLYVANEDFAFLMHRLPMARAARDAGYEVHVATNVNAGAAAIAAERFVL
CCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHEE
HPIPFRRGGLSPSSALPTVRAIRAVEAAIRPDIVHHSGLQASVLGSLAALGRPAPVVNAM
CCCCCCCCCCCCHHHCHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHCCCCCHHHHHH
TGMGYIFTSSSWRSRLLKRGLLSLLPWLMNRRPSCVLVQNPDDRDALQAMGVRADKITLI
HCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHCCCCCEEEEE
PGSGVDTDRFRPLPEPDGPITFGFAGRLLTDKGIRALIAAHRMLRQQGRNDQLLIAGSPD
CCCCCCHHHCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCC
PANPASVSAAEIEAWRAEPGITLLGQIKDITELWRRCHVAVLPSHREGLPVSLLEAAACG
CCCCCCCCHHHHHHHCCCCCCEEHHHHHHHHHHHHHCEEEECCCCCCCCCHHHHHHHHCC
RPLVSTDAPGCREIAIHGQTGLAVLVEDAAALAQAMAQLATSPELRARYGQAARQLVEDK
CCCCCCCCCCCEEEEEECCCCEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
LSARIIGRSVVALYDRLTAASGDHQ
HHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PPPHSASPRRLLYVANEDFAFLMHRLPMARAARDAGYEVHVATNVNAGAAAIAAERFVL
CCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHEE
HPIPFRRGGLSPSSALPTVRAIRAVEAAIRPDIVHHSGLQASVLGSLAALGRPAPVVNAM
CCCCCCCCCCCCHHHCHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHCCCCCHHHHHH
TGMGYIFTSSSWRSRLLKRGLLSLLPWLMNRRPSCVLVQNPDDRDALQAMGVRADKITLI
HCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHCCCCCEEEEE
PGSGVDTDRFRPLPEPDGPITFGFAGRLLTDKGIRALIAAHRMLRQQGRNDQLLIAGSPD
CCCCCCHHHCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCC
PANPASVSAAEIEAWRAEPGITLLGQIKDITELWRRCHVAVLPSHREGLPVSLLEAAACG
CCCCCCCCHHHHHHHCCCCCCEEHHHHHHHHHHHHHCEEEECCCCCCCCCHHHHHHHHCC
RPLVSTDAPGCREIAIHGQTGLAVLVEDAAALAQAMAQLATSPELRARYGQAARQLVEDK
CCCCCCCCCCCEEEEEECCCCEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
LSARIIGRSVVALYDRLTAASGDHQ
HHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7961465 [H]