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The map label for this gene is yibD [C]

Identifier: 146342043

GI number: 146342043

Start: 5390492

End: 5391550

Strand: Direct

Name: yibD [C]

Synonym: BRADO5182

Alternate gene names: 146342043

Gene position: 5390492-5391550 (Clockwise)

Preceding gene: 146342042

Following gene: 146342044

Centisome position: 72.29

GC content: 66.86

Gene sequence:

>1059_bases
ATGACCCCGACGACCGCTTCACCGACCGTTACACTGGTTGTCCCGAACTTCAATCACGCACGCTACCTGCGGGAGTCGCT
CGGCAGCATTGCGGCCCAGACCCGCGCGCCCGACCGCGTGCTCGTCATCGACGACTGCTCGACCGATGACAGCCTGTCGG
TGATTGCAACATTCGCAGCAGATCGGCCGAGCTGGCATGTGATCCGCCATCCAGCCAACCAGGGCGTGGTACGCAGCCAG
AACGAGGCGCTGGCCCTCGCCGAGACCGAGTGGATCGGCTTTCTCGGAGCCGACGACGCGCTGCATCCGACCTATCTGCA
AAAGACCATGGCGCAGGCCGCGCGATGGCCCGACGCCGGCCTGCTGTTCGCATGCTGCGAGATCATAGGCCCGAACGGTC
CTTCCGCACGCCGCATGCTGCGCCCGATGATGCTGCCCGCCACCAGTTCGAGAATGCTCTCTCCACCTGACGTTCGGCGG
GTTCTGCGCGTCGGAGACAACTACTTCTCCGGCACGACGTCGCTGTACCGCTGCGCTGCGCTTCGGGCCCTCGGCGGCTT
CGACGTCAAACTTGGTTCGTTCTCGGACGCCTTTCTGGCCAGACGGCTTGCGCTGACCTATGGCTGCTACTTCATCGCCG
ACATTCTCGGGTACTGGCGCATCCACGGCCAGAACTACTCGACCGCCTCGGCGACCGATCCCGCCCTGCTCAATGACAGG
CTAAGGGACATCGGCGCCCTCATCGCGAAGAGCAAGCTGTTCCCGGAGGGCTACGGCGACGTGTTCGCACGGCGCAACCG
ATTCGGAGCGGTCCGGATGGTGCTGGGCAGCGAGTCCTCTGCGGCGGCGAAAGCCGAGCGGGCCGCGGCGCTGCTCGACG
GCACGGCGTTCGACCGGCACCTGCTGCAGCTGGTCCTGAGCCTCGGGGCCGGCGGCCGCCTCGCCGCGCTGGCTTGGGCC
ACCTTGCGGACACGCCCAATGTCGCTGCTGCATGTCGCAGCCCAAACTCAGACACGGCGCGCCATCGTGTCCGCGACGCC
CCCCTACCGCGCGCCATGA

Upstream 100 bases:

>100_bases
GACGCGTGCGCGCCTTCGGTGCGCTGGAGGACGTTCTCAAAGAGCTGCCCGCGGCTTGAGCTGTCCAATGCGACAGCATG
CGGTATAGAGTTCGCTGAGC

Downstream 100 bases:

>100_bases
CGATGCGGGCTCCCGTTGGCTCACTACGGCATCGTCTGAGCAGGCTGCAGGCCCCGGTCAGCAAACCAGCCGCCGTGATC
GAAGCCGCACAGCCCGCTTC

Product: putative glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 351

Protein sequence:

>352_residues
MTPTTASPTVTLVVPNFNHARYLRESLGSIAAQTRAPDRVLVIDDCSTDDSLSVIATFAADRPSWHVIRHPANQGVVRSQ
NEALALAETEWIGFLGADDALHPTYLQKTMAQAARWPDAGLLFACCEIIGPNGPSARRMLRPMMLPATSSRMLSPPDVRR
VLRVGDNYFSGTTSLYRCAALRALGGFDVKLGSFSDAFLARRLALTYGCYFIADILGYWRIHGQNYSTASATDPALLNDR
LRDIGALIAKSKLFPEGYGDVFARRNRFGAVRMVLGSESSAAAKAERAAALLDGTAFDRHLLQLVLSLGAGGRLAALAWA
TLRTRPMSLLHVAAQTQTRRAIVSATPPYRAP

Sequences:

>Translated_352_residues
MTPTTASPTVTLVVPNFNHARYLRESLGSIAAQTRAPDRVLVIDDCSTDDSLSVIATFAADRPSWHVIRHPANQGVVRSQ
NEALALAETEWIGFLGADDALHPTYLQKTMAQAARWPDAGLLFACCEIIGPNGPSARRMLRPMMLPATSSRMLSPPDVRR
VLRVGDNYFSGTTSLYRCAALRALGGFDVKLGSFSDAFLARRLALTYGCYFIADILGYWRIHGQNYSTASATDPALLNDR
LRDIGALIAKSKLFPEGYGDVFARRNRFGAVRMVLGSESSAAAKAERAAALLDGTAFDRHLLQLVLSLGAGGRLAALAWA
TLRTRPMSLLHVAAQTQTRRAIVSATPPYRAP
>Mature_351_residues
TPTTASPTVTLVVPNFNHARYLRESLGSIAAQTRAPDRVLVIDDCSTDDSLSVIATFAADRPSWHVIRHPANQGVVRSQN
EALALAETEWIGFLGADDALHPTYLQKTMAQAARWPDAGLLFACCEIIGPNGPSARRMLRPMMLPATSSRMLSPPDVRRV
LRVGDNYFSGTTSLYRCAALRALGGFDVKLGSFSDAFLARRLALTYGCYFIADILGYWRIHGQNYSTASATDPALLNDRL
RDIGALIAKSKLFPEGYGDVFARRNRFGAVRMVLGSESSAAAKAERAAALLDGTAFDRHLLQLVLSLGAGGRLAALAWAT
LRTRPMSLLHVAAQTQTRRAIVSATPPYRAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 38174; Mature: 38043

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPTTASPTVTLVVPNFNHARYLRESLGSIAAQTRAPDRVLVIDDCSTDDSLSVIATFAA
CCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEECC
DRPSWHVIRHPANQGVVRSQNEALALAETEWIGFLGADDALHPTYLQKTMAQAARWPDAG
CCCCEEEEECCCCCCCEECCCCEEEEEECCEEEEECCCCCCCHHHHHHHHHHHHCCCCCH
LLFACCEIIGPNGPSARRMLRPMMLPATSSRMLSPPDVRRVLRVGDNYFSGTTSLYRCAA
HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHH
LRALGGFDVKLGSFSDAFLARRLALTYGCYFIADILGYWRIHGQNYSTASATDPALLNDR
HHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHH
LRDIGALIAKSKLFPEGYGDVFARRNRFGAVRMVLGSESSAAAKAERAAALLDGTAFDRH
HHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHCCCHHHHH
LLQLVLSLGAGGRLAALAWATLRTRPMSLLHVAAQTQTRRAIVSATPPYRAP
HHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEECCCCCCCC
>Mature Secondary Structure 
TPTTASPTVTLVVPNFNHARYLRESLGSIAAQTRAPDRVLVIDDCSTDDSLSVIATFAA
CCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEECC
DRPSWHVIRHPANQGVVRSQNEALALAETEWIGFLGADDALHPTYLQKTMAQAARWPDAG
CCCCEEEEECCCCCCCEECCCCEEEEEECCEEEEECCCCCCCHHHHHHHHHHHHCCCCCH
LLFACCEIIGPNGPSARRMLRPMMLPATSSRMLSPPDVRRVLRVGDNYFSGTTSLYRCAA
HHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHH
LRALGGFDVKLGSFSDAFLARRLALTYGCYFIADILGYWRIHGQNYSTASATDPALLNDR
HHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHH
LRDIGALIAKSKLFPEGYGDVFARRNRFGAVRMVLGSESSAAAKAERAAALLDGTAFDRH
HHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHCCCHHHHH
LLQLVLSLGAGGRLAALAWATLRTRPMSLLHVAAQTQTRRAIVSATPPYRAP
HHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11759840; 2111805 [H]