Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146342040
Identifier: 146342040
GI number: 146342040
Start: 5387410
End: 5388675
Strand: Direct
Name: 146342040
Synonym: BRADO5179
Alternate gene names: NA
Gene position: 5387410-5388675 (Clockwise)
Preceding gene: 146342039
Following gene: 146342041
Centisome position: 72.25
GC content: 63.67
Gene sequence:
>1266_bases ATGCAGCACGTGAAGCACAAGACCGATTGCCGCCTGTGCGGATCGACCTCGCTCGATCACGTGCTGCCCATCAGGGCGTC GGCGATCGGCGATGCGTTCGTGACGGCGGACCGGCTGGACGAAAAGCAGGACCTCTACCCGCTCGACTGCTATCTCTGCC TTGACTGTGGTCACCTGCAGAATCTCGACGTGGTCGACCCCGACATCCTGTTCCGCGACTATACCTACCGCACCTCGGTC TCGCTTGGGCTGGTCGAGCATTTCAAGCGCTATGCGCAATCGGTGGTGTCGACGCTTGCGATACCGAAGGGCAGCCTCGT CGCCGAGATGGGCAGCAATGACGGCTCGCTCCTCAAGGCGTTCAAGAACGAGGGCATGCGGGTGCAGGGCATCGATCCCG CCCGTGACATCGCGGCCACGGCCACCAGCGAAGGCATTCCCACGATCCCGGACTTCTTCAGCAGCGCCCTGGCCGCCCGG ATCAAGGCCGAACAGGGCGAAACCAAGCTGTTCTGCGCCAACAACGTGTTCGCCCACATCGACAACATGTCTGACGTCGT GAAGGGCATCCGACTGCTGCTCGCCGACGACGGCGCCTTCGTGTTCGAGGTGTCCTATATTGTGGACATGATCGACAACA TGGTGTTCGACACGATCTACCATGAGCACGTCTCGCACCACGCGCTCATCCCGCTCGAGACCTTCCTGAATCGGCATGAC ATGACGCTGTTCCACGTCGAGCGCACGGCGACCAAAGGCGGCTCGATCCGCGCCTTCGCCCAGCCGAAATCGACCGGCCA GCGTCCGCGCTCGGCAGAGCTGTCGCAACTGATCGCCGAAGAGGAGCGGCGCGGCGTGACCAAGCCGCAGATCTACCGCG ACTGGTTCGTGGCCATCGAGGCCTGCAAGCGCAAGGTGCTGGCCACGCTCGACGCTGCGATCGCCGAGGGCAAGCTGATC GCCGCCTACGGCGCCTCAACCACCACCACCACCCTGTTGTACCATTTCGAGTTGGAGAGCCGGGTCAAGTTCATCGTCGA CGACAACCAGCTCAAGCACGGCCGCTTCAGCCCCGGCGCACATATCCCGGTTCTGCCGTCGAGCGAGCTTGCGACGCGGA AGCCCGACGTTGTTGTGATCCTTGCCTGGATCTACGCGGATCCGATCCTGAAGCGGAACCAGGCCTATCTGGAAGCCGGC GGCCGGTTTCTGGTGCCGCTGCCGGAGCCCCGGCTGGTCGGCGTGACGGGGGCGGCTCCGATCTGA
Upstream 100 bases:
>100_bases AAGAGGTCGCCAAGAGCTTCGCGGGCCTGTAAAACGCGCCGCAAATTCGCTTCGGCCTACCATCCCGCCTGCGGGACCGC CAACCCAGGATCGCGACATC
Downstream 100 bases:
>100_bases GCGACGGCTGCAGCCGGAGCAGAGCGGTTGACAGCCTCGACGTAACGTGATCCAGCAAGCGCCAGCCGATCGGCCGCTGT CGGCCGCGGCGCTTGAGCGC
Product: putative S-adenosyl-L-methionine (SAM)-dependent methyltransferase
Products: NA
Alternate protein names: Methyltransferase; SAM-Dependent Methyltransferase; D-Mycarose 3-C-Methyltransferase; NDP-Hexose 3-C-Methyltransferase TylCIII; NDP-Hexose 3-C-Methyltransferase Protein; Sugar 3-C-Methyl Transferase; Methyltransferase Type; Methyltransferase Family Protein; C-3 Methyl Transferase; NAD-Dependent Epimerase/Dehydratase; Methyltransferase-Like Protein; S-Adenosyl-L-Methionine-Dependent Methyltransferase; NDP-4-Keto-2 6-Dideoxyhexose 3-C-Methyltransferase; S-Adenosyl-Dependent Methyltransferase; S-Adenosyl-Dependent Methyl Transferase; NDP-Hexose 3-C-Methyltransferase; EryBIII NDP-4-Keto-2 6-Dideoxyhexose 3-C-Methyltransferase; C-Methyltransferase Family
Number of amino acids: Translated: 421; Mature: 421
Protein sequence:
>421_residues MQHVKHKTDCRLCGSTSLDHVLPIRASAIGDAFVTADRLDEKQDLYPLDCYLCLDCGHLQNLDVVDPDILFRDYTYRTSV SLGLVEHFKRYAQSVVSTLAIPKGSLVAEMGSNDGSLLKAFKNEGMRVQGIDPARDIAATATSEGIPTIPDFFSSALAAR IKAEQGETKLFCANNVFAHIDNMSDVVKGIRLLLADDGAFVFEVSYIVDMIDNMVFDTIYHEHVSHHALIPLETFLNRHD MTLFHVERTATKGGSIRAFAQPKSTGQRPRSAELSQLIAEEERRGVTKPQIYRDWFVAIEACKRKVLATLDAAIAEGKLI AAYGASTTTTTLLYHFELESRVKFIVDDNQLKHGRFSPGAHIPVLPSSELATRKPDVVVILAWIYADPILKRNQAYLEAG GRFLVPLPEPRLVGVTGAAPI
Sequences:
>Translated_421_residues MQHVKHKTDCRLCGSTSLDHVLPIRASAIGDAFVTADRLDEKQDLYPLDCYLCLDCGHLQNLDVVDPDILFRDYTYRTSV SLGLVEHFKRYAQSVVSTLAIPKGSLVAEMGSNDGSLLKAFKNEGMRVQGIDPARDIAATATSEGIPTIPDFFSSALAAR IKAEQGETKLFCANNVFAHIDNMSDVVKGIRLLLADDGAFVFEVSYIVDMIDNMVFDTIYHEHVSHHALIPLETFLNRHD MTLFHVERTATKGGSIRAFAQPKSTGQRPRSAELSQLIAEEERRGVTKPQIYRDWFVAIEACKRKVLATLDAAIAEGKLI AAYGASTTTTTLLYHFELESRVKFIVDDNQLKHGRFSPGAHIPVLPSSELATRKPDVVVILAWIYADPILKRNQAYLEAG GRFLVPLPEPRLVGVTGAAPI >Mature_421_residues MQHVKHKTDCRLCGSTSLDHVLPIRASAIGDAFVTADRLDEKQDLYPLDCYLCLDCGHLQNLDVVDPDILFRDYTYRTSV SLGLVEHFKRYAQSVVSTLAIPKGSLVAEMGSNDGSLLKAFKNEGMRVQGIDPARDIAATATSEGIPTIPDFFSSALAAR IKAEQGETKLFCANNVFAHIDNMSDVVKGIRLLLADDGAFVFEVSYIVDMIDNMVFDTIYHEHVSHHALIPLETFLNRHD MTLFHVERTATKGGSIRAFAQPKSTGQRPRSAELSQLIAEEERRGVTKPQIYRDWFVAIEACKRKVLATLDAAIAEGKLI AAYGASTTTTTLLYHFELESRVKFIVDDNQLKHGRFSPGAHIPVLPSSELATRKPDVVVILAWIYADPILKRNQAYLEAG GRFLVPLPEPRLVGVTGAAPI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46506; Mature: 46506
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQHVKHKTDCRLCGSTSLDHVLPIRASAIGDAFVTADRLDEKQDLYPLDCYLCLDCGHLQ CCCCCCCCCCEECCCCCCCCEECCHHHHHCCHHHHHHHCCCCCCCCCEEEEEEEECCCCC NLDVVDPDILFRDYTYRTSVSLGLVEHFKRYAQSVVSTLAIPKGSLVAEMGSNDGSLLKA CCCCCCHHHEEECCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHH FKNEGMRVQGIDPARDIAATATSEGIPTIPDFFSSALAARIKAEQGETKLFCANNVFAHI HHHCCCEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCEEEC DNMSDVVKGIRLLLADDGAFVFEVSYIVDMIDNMVFDTIYHEHVSHHALIPLETFLNRHD CCHHHHHHHHEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHCCCCC MTLFHVERTATKGGSIRAFAQPKSTGQRPRSAELSQLIAEEERRGVTKPQIYRDWFVAIE CEEEEEEECCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH ACKRKVLATLDAAIAEGKLIAAYGASTTTTTLLYHFELESRVKFIVDDNQLKHGRFSPGA HHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEEEEEECCCEEEEEECCCCCCCCCCCCC HIPVLPSSELATRKPDVVVILAWIYADPILKRNQAYLEAGGRFLVPLPEPRLVGVTGAAP CCCCCCCCCCCCCCCCEEEEEHHHHHCHHHHCCHHHHHCCCEEEEECCCCCEEEECCCCC I C >Mature Secondary Structure MQHVKHKTDCRLCGSTSLDHVLPIRASAIGDAFVTADRLDEKQDLYPLDCYLCLDCGHLQ CCCCCCCCCCEECCCCCCCCEECCHHHHHCCHHHHHHHCCCCCCCCCEEEEEEEECCCCC NLDVVDPDILFRDYTYRTSVSLGLVEHFKRYAQSVVSTLAIPKGSLVAEMGSNDGSLLKA CCCCCCHHHEEECCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHH FKNEGMRVQGIDPARDIAATATSEGIPTIPDFFSSALAARIKAEQGETKLFCANNVFAHI HHHCCCEEECCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCEEEC DNMSDVVKGIRLLLADDGAFVFEVSYIVDMIDNMVFDTIYHEHVSHHALIPLETFLNRHD CCHHHHHHHHEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHCCCCC MTLFHVERTATKGGSIRAFAQPKSTGQRPRSAELSQLIAEEERRGVTKPQIYRDWFVAIE CEEEEEEECCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH ACKRKVLATLDAAIAEGKLIAAYGASTTTTTLLYHFELESRVKFIVDDNQLKHGRFSPGA HHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEEEEEEECCCEEEEEECCCCCCCCCCCCC HIPVLPSSELATRKPDVVVILAWIYADPILKRNQAYLEAGGRFLVPLPEPRLVGVTGAAP CCCCCCCCCCCCCCCCEEEEEHHHHHCHHHHCCHHHHHCCCEEEEECCCCCEEEECCCCC I C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA