Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
---|---|
Accession | NC_009445 |
Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is 146342038
Identifier: 146342038
GI number: 146342038
Start: 5386101
End: 5386604
Strand: Direct
Name: 146342038
Synonym: BRADO5176
Alternate gene names: NA
Gene position: 5386101-5386604 (Clockwise)
Preceding gene: 146342037
Following gene: 146342039
Centisome position: 72.23
GC content: 63.89
Gene sequence:
>504_bases CTGGCCGAAGGTCCGATTGCGGCGGTCGGACAGGCCGAAATCGAAACATTGAAGGCCGCCGTTGCCGCCAGCCCCAAGCG ACGGGCGCGCATCAATGCCCACCCTGACGGCGAGGATCAGCTGCACGAGATGATCATCGCGATCGATTCGGCCTCCTACA TCCGGCCGCACAAGCATCCCGGCAAGAGCGAAGCCTTTCACATCATCGAAGGCGAGGTCGACATCGTCGTGTTCAAGGAT GACGGGGAGATCGAGAAAGTGGTGGAGCTTGGCCCCCCGGGCGGCGCCCGCCCGTTCTACTACCGGATGTCAAACGCGTT CTTTCATACCCTGATCATACGTAGCGATCTCCTGATCGTGCACGAGATCACCAACGGCCCGTTCCGGCCCGGGGCGAGCG TGTTCGCCGACTTCGCGCCAGAGGACAGCGACACCACCAAGGTCGCGGCCTACCAGGCCGAGCTCGCCCGCCGCGTCGCC GACCTGCAGGATGCTGCAGCATGA
Upstream 100 bases:
>100_bases CCCGGGGCGTCGAATTCCGCTCCATCTACGCGGCGCTCGACAACGCTATTTTCAAGGACAATGCTCCATGAGCCTCGTTC AAAAGTCTCCTGAGGTCTTC
Downstream 100 bases:
>100_bases CCGTGCATGCTGTGGTGATTGGCGGCACCCGCGGCCTCGGTCGCGTTGTCGTCGAGCGCTTCCTGGCCCGAGGCTGCGCC GTCAGCGTGGTATCGCGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MAEGPIAAVGQAEIETLKAAVAASPKRRARINAHPDGEDQLHEMIIAIDSASYIRPHKHPGKSEAFHIIEGEVDIVVFKD DGEIEKVVELGPPGGARPFYYRMSNAFFHTLIIRSDLLIVHEITNGPFRPGASVFADFAPEDSDTTKVAAYQAELARRVA DLQDAAA
Sequences:
>Translated_167_residues MAEGPIAAVGQAEIETLKAAVAASPKRRARINAHPDGEDQLHEMIIAIDSASYIRPHKHPGKSEAFHIIEGEVDIVVFKD DGEIEKVVELGPPGGARPFYYRMSNAFFHTLIIRSDLLIVHEITNGPFRPGASVFADFAPEDSDTTKVAAYQAELARRVA DLQDAAA >Mature_166_residues AEGPIAAVGQAEIETLKAAVAASPKRRARINAHPDGEDQLHEMIIAIDSASYIRPHKHPGKSEAFHIIEGEVDIVVFKDD GEIEKVVELGPPGGARPFYYRMSNAFFHTLIIRSDLLIVHEITNGPFRPGASVFADFAPEDSDTTKVAAYQAELARRVAD LQDAAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18144; Mature: 18012
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEGPIAAVGQAEIETLKAAVAASPKRRARINAHPDGEDQLHEMIIAIDSASYIRPHKHP CCCCCCCCCCHHHHHHHHHHHHCCCCHHCEECCCCCCHHHHHHHHHEECCCCCCCCCCCC GKSEAFHIIEGEVDIVVFKDDGEIEKVVELGPPGGARPFYYRMSNAFFHTLIIRSDLLIV CCCCEEEEEECCEEEEEECCCCCEEEHEEECCCCCCCCEEEEHHHHHHHHHHHHCCEEEE HEITNGPFRPGASVFADFAPEDSDTTKVAAYQAELARRVADLQDAAA EECCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AEGPIAAVGQAEIETLKAAVAASPKRRARINAHPDGEDQLHEMIIAIDSASYIRPHKHP CCCCCCCCCHHHHHHHHHHHHCCCCHHCEECCCCCCHHHHHHHHHEECCCCCCCCCCCC GKSEAFHIIEGEVDIVVFKDDGEIEKVVELGPPGGARPFYYRMSNAFFHTLIIRSDLLIV CCCCEEEEEECCEEEEEECCCCCEEEHEEECCCCCCCCEEEEHHHHHHHHHHHHCCEEEE HEITNGPFRPGASVFADFAPEDSDTTKVAAYQAELARRVADLQDAAA EECCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA