Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146342037
Identifier: 146342037
GI number: 146342037
Start: 5384860
End: 5386071
Strand: Direct
Name: 146342037
Synonym: BRADO5175
Alternate gene names: NA
Gene position: 5384860-5386071 (Clockwise)
Preceding gene: 146342036
Following gene: 146342038
Centisome position: 72.22
GC content: 63.37
Gene sequence:
>1212_bases ATGTCTACGCATCCCATGACCACGCGATGTCGGCTATGCAACCAAATGATTCAGGCGATGCCATTGTCGCTCGGCTCGCT TCCGGTTTGCAATGCATTCGACCGCAATCGCTCCACGACTCGAACGATCGATCTCGACATCATCGAATGCGAGACGTGCC AACTCGTGCAGCTGGGCCGCGTTGCCGCGCCCGAACTTTTGATGCCGGCGGTGCCGTGGATCCGCTATCGCGAGCCCGAG GGTCATCTCGACGACCTCGTCGCGAGCTTGTTGTCCCTGCACCCTGGCGCGCGGCGCGCGTGCGGCACCGGCCCGTTTGA GCAGCCGCTGCTGTCCAGACTTGACGCGCGTGGTCTCCAGACGCAGGCGCTGACGCTCGAAACGACTGCTCCCGCAGGCC GTCATCCCTATCTGGAAAGCTGGCAGGCAATCCTCAACGCGGATCATCTTGCGGCTGCGACGGCCCGAAGCGGAACCTTC GACCTCGTCTCTTGCCGTTACATCGTCGAGCACAGTCCCGCTCCGGTTCTCGCTTTGCGGGCCATGAGGCACCTGCTCGC ACCTGACGGTCTGTTGCTGGTCGAAGTCCCCGACAGCAGCAAATTTCTGGCCGCTTGCGACTATTGTTTCCTCTGGGAGG AGCACAGCAGCTATTTCGTCGAGCCGACGCTGCGGCGCCTCGCCGAGATGAGCGGGTACCATGTGGTGTCCCTGCTTCGC TATCCAGGCGCCCTCGAGGATGCCTTGGTGGCTATCCTGCAGCCGGCGATGTCTCCGACCGCAATGATTTCGCCTCTCGG GTCAACCGGGCTGTTTCAGACCTATCGCCAGGCCTTCGCCGGGCGACGGGAGACCGTGCAGAGCCGGCTGAGAGCCGCGG CTCGCCCGGACGGCGACGGCGTTGCGCTGTTCGGGATTGGCCACCACGCCATCATGTTCGTCAACGCGTTCGGGGTGGGG AATAGAATCGCGCTGGCCGTCGATGACGACAGCGACAAGGCCGGTTTTTTCCCGCCGGGTTTCGAGGTGCCTGTGGTAGG TTCGGACCGTCTGCTGGCGGACGAGCACGTCACACTTTGCCTGTTTGCGGTCGCACCTCACATCGAGGGCAAGGTGCGCG CGAAGCTGGCTCCCCTCGCCGCCCGGGGCGTCGAATTCCGCTCCATCTACGCGGCGCTCGACAACGCTATTTTCAAGGAC AATGCTCCATGA
Upstream 100 bases:
>100_bases GCTTCCCGGCCATCAGAGGTCCTTGAATCGTGACCGCGTGACGGAAAAAAACTGATCCTTGGCTTGTAGCGCAAGGCAAA TCGGGATTGTCCTGAAACAA
Downstream 100 bases:
>100_bases GCCTCGTTCAAAAGTCTCCTGAGGTCTTCCTGGCCGAAGGTCCGATTGCGGCGGTCGGACAGGCCGAAATCGAAACATTG AAGGCCGCCGTTGCCGCCAG
Product: putative S-adenosyl-L-methionine (SAM)-dependent methyltransferase
Products: NA
Alternate protein names: C-Methyltransferase; D-Mycarose 3-C-Methyltransferase; NDP-Hexose Methyltransferase Protein; SAM-Dependent Methyltransferase; Methyltransferase Type
Number of amino acids: Translated: 403; Mature: 402
Protein sequence:
>403_residues MSTHPMTTRCRLCNQMIQAMPLSLGSLPVCNAFDRNRSTTRTIDLDIIECETCQLVQLGRVAAPELLMPAVPWIRYREPE GHLDDLVASLLSLHPGARRACGTGPFEQPLLSRLDARGLQTQALTLETTAPAGRHPYLESWQAILNADHLAAATARSGTF DLVSCRYIVEHSPAPVLALRAMRHLLAPDGLLLVEVPDSSKFLAACDYCFLWEEHSSYFVEPTLRRLAEMSGYHVVSLLR YPGALEDALVAILQPAMSPTAMISPLGSTGLFQTYRQAFAGRRETVQSRLRAAARPDGDGVALFGIGHHAIMFVNAFGVG NRIALAVDDDSDKAGFFPPGFEVPVVGSDRLLADEHVTLCLFAVAPHIEGKVRAKLAPLAARGVEFRSIYAALDNAIFKD NAP
Sequences:
>Translated_403_residues MSTHPMTTRCRLCNQMIQAMPLSLGSLPVCNAFDRNRSTTRTIDLDIIECETCQLVQLGRVAAPELLMPAVPWIRYREPE GHLDDLVASLLSLHPGARRACGTGPFEQPLLSRLDARGLQTQALTLETTAPAGRHPYLESWQAILNADHLAAATARSGTF DLVSCRYIVEHSPAPVLALRAMRHLLAPDGLLLVEVPDSSKFLAACDYCFLWEEHSSYFVEPTLRRLAEMSGYHVVSLLR YPGALEDALVAILQPAMSPTAMISPLGSTGLFQTYRQAFAGRRETVQSRLRAAARPDGDGVALFGIGHHAIMFVNAFGVG NRIALAVDDDSDKAGFFPPGFEVPVVGSDRLLADEHVTLCLFAVAPHIEGKVRAKLAPLAARGVEFRSIYAALDNAIFKD NAP >Mature_402_residues STHPMTTRCRLCNQMIQAMPLSLGSLPVCNAFDRNRSTTRTIDLDIIECETCQLVQLGRVAAPELLMPAVPWIRYREPEG HLDDLVASLLSLHPGARRACGTGPFEQPLLSRLDARGLQTQALTLETTAPAGRHPYLESWQAILNADHLAAATARSGTFD LVSCRYIVEHSPAPVLALRAMRHLLAPDGLLLVEVPDSSKFLAACDYCFLWEEHSSYFVEPTLRRLAEMSGYHVVSLLRY PGALEDALVAILQPAMSPTAMISPLGSTGLFQTYRQAFAGRRETVQSRLRAAARPDGDGVALFGIGHHAIMFVNAFGVGN RIALAVDDDSDKAGFFPPGFEVPVVGSDRLLADEHVTLCLFAVAPHIEGKVRAKLAPLAARGVEFRSIYAALDNAIFKDN AP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43891; Mature: 43760
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTHPMTTRCRLCNQMIQAMPLSLGSLPVCNAFDRNRSTTRTIDLDIIECETCQLVQLGR CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCHHHHHHCC VAAPELLMPAVPWIRYREPEGHLDDLVASLLSLHPGARRACGTGPFEQPLLSRLDARGLQ CCCCHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCC TQALTLETTAPAGRHPYLESWQAILNADHLAAATARSGTFDLVSCRYIVEHSPAPVLALR EEEEEEEECCCCCCCCHHHHHHHHHCCHHHHHHHCCCCCEEEEEEEEEECCCCCHHHHHH AMRHLLAPDGLLLVEVPDSSKFLAACDYCFLWEEHSSYFVEPTLRRLAEMSGYHVVSLLR HHHHHHCCCCEEEEECCCCCCHHHHCCEEEEEECCCCEEECHHHHHHHHHCCHHHHHHHH YPGALEDALVAILQPAMSPTAMISPLGSTGLFQTYRQAFAGRRETVQSRLRAAARPDGDG CCCHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCC VALFGIGHHAIMFVNAFGVGNRIALAVDDDSDKAGFFPPGFEVPVVGSDRLLADEHVTLC EEEEECCCEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCEEEECCCCCEECCCHHEEE LFAVAPHIEGKVRAKLAPLAARGVEFRSIYAALDNAIFKDNAP EEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure STHPMTTRCRLCNQMIQAMPLSLGSLPVCNAFDRNRSTTRTIDLDIIECETCQLVQLGR CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCHHHHHHCC VAAPELLMPAVPWIRYREPEGHLDDLVASLLSLHPGARRACGTGPFEQPLLSRLDARGLQ CCCCHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCC TQALTLETTAPAGRHPYLESWQAILNADHLAAATARSGTFDLVSCRYIVEHSPAPVLALR EEEEEEEECCCCCCCCHHHHHHHHHCCHHHHHHHCCCCCEEEEEEEEEECCCCCHHHHHH AMRHLLAPDGLLLVEVPDSSKFLAACDYCFLWEEHSSYFVEPTLRRLAEMSGYHVVSLLR HHHHHHCCCCEEEEECCCCCCHHHHCCEEEEEECCCCEEECHHHHHHHHHCCHHHHHHHH YPGALEDALVAILQPAMSPTAMISPLGSTGLFQTYRQAFAGRRETVQSRLRAAARPDGDG CCCHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCC VALFGIGHHAIMFVNAFGVGNRIALAVDDDSDKAGFFPPGFEVPVVGSDRLLADEHVTLC EEEEECCCEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCEEEECCCCCEECCCHHEEE LFAVAPHIEGKVRAKLAPLAARGVEFRSIYAALDNAIFKDNAP EEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA