| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is hyi [H]
Identifier: 146341818
GI number: 146341818
Start: 5136081
End: 5136872
Strand: Reverse
Name: hyi [H]
Synonym: BRADO4945
Alternate gene names: 146341818
Gene position: 5136872-5136081 (Counterclockwise)
Preceding gene: 146341819
Following gene: 146341817
Centisome position: 68.89
GC content: 66.04
Gene sequence:
>792_bases ATGCCGCACTTTGCCGCCAACCTGACGATGCTGTTCAACGAGCTGCCGTTTCTGGAGCGTTTCGCCGCCGCCAAGGCGGC CGGGTTCAGCGGCGTCGAGTATCTGTTTCCCTACGAGTTCGACAAGGCCGAGCTGCGCGAGCAGCTCGCCCGCCACGGCC TGACCCAGGTGCTGCACAATCTGCCCGCCGGCAACTGGGCCGCCGGCGAGCGCGGCATCGCCATCCTGCCGGACCGCGTC GACGATTTTCGCGAGGGCGTCCGCCGCGGTATCGAATACGCCCGGGCGCTCGACTGCCGTCAGCTCAACTGCCTCGTCGG CATCGCGCCCGATGGTGCCGATCCGCGCGAGCTCAATCAGACGCTGCTGCGCAATCTGCGCTTCGCCGCGACCGCGCTGA AGGCGCAGGGCATCAAGCTCCTGATCGAGCCGATCAACACGCTCGACATTCCCGGCTTCTTCCTCAACCGCACCGCTCAG GCGCTGCAGCTGATCTCCGATGTCGAGTCCGACAACCTGTTCGTCCAATACGACATCTATCACATGCAGATCATGGAGGG CGATCTCGCGCGCACCCTACAGAAGCATCTCGCCCGCATCGCCCACATCCAGCTCGCCGACAACCCCGGCCGCCACGAGC CCGGCACCGGCGAGATCAACTACGCGTATCTGTTCCGCCACCTCGATGCGATCGGCTATGCCGGCTGGGTCGGCTGCGAG TACAAGCCGAGGACGAAGACCGAGGAGGGGCTCGGCTGGCTGACGGAGCGCGCGGCCGTGACGTCGAGTTGA
Upstream 100 bases:
>100_bases GGAGGTGCTCGACCTGCCGGTGGACGAGACGCCGGCCGAGTCGCAGCGCACCCTGCAGCCGGCGTGATCGCAGCCAACGC ATTCAGTCGAGGACCACCCT
Downstream 100 bases:
>100_bases GGTCGGCGATCGACAGGTTCAGCCCGCCGCTGCCGGCTCCGCGTGCAAGCTCGAGGCAGAGCCGCTGTCGCGCATCTATC TCATGGCCACGCTGCCCGCG
Product: hydroxypyruvate isomerase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MPHFAANLTMLFNELPFLERFAAAKAAGFSGVEYLFPYEFDKAELREQLARHGLTQVLHNLPAGNWAAGERGIAILPDRV DDFREGVRRGIEYARALDCRQLNCLVGIAPDGADPRELNQTLLRNLRFAATALKAQGIKLLIEPINTLDIPGFFLNRTAQ ALQLISDVESDNLFVQYDIYHMQIMEGDLARTLQKHLARIAHIQLADNPGRHEPGTGEINYAYLFRHLDAIGYAGWVGCE YKPRTKTEEGLGWLTERAAVTSS
Sequences:
>Translated_263_residues MPHFAANLTMLFNELPFLERFAAAKAAGFSGVEYLFPYEFDKAELREQLARHGLTQVLHNLPAGNWAAGERGIAILPDRV DDFREGVRRGIEYARALDCRQLNCLVGIAPDGADPRELNQTLLRNLRFAATALKAQGIKLLIEPINTLDIPGFFLNRTAQ ALQLISDVESDNLFVQYDIYHMQIMEGDLARTLQKHLARIAHIQLADNPGRHEPGTGEINYAYLFRHLDAIGYAGWVGCE YKPRTKTEEGLGWLTERAAVTSS >Mature_262_residues PHFAANLTMLFNELPFLERFAAAKAAGFSGVEYLFPYEFDKAELREQLARHGLTQVLHNLPAGNWAAGERGIAILPDRVD DFREGVRRGIEYARALDCRQLNCLVGIAPDGADPRELNQTLLRNLRFAATALKAQGIKLLIEPINTLDIPGFFLNRTAQA LQLISDVESDNLFVQYDIYHMQIMEGDLARTLQKHLARIAHIQLADNPGRHEPGTGEINYAYLFRHLDAIGYAGWVGCEY KPRTKTEEGLGWLTERAAVTSS
Specific function: Catalyzes the reversible isomerization between hydroxypyruvate and 2-hydroxy-3-oxopropanoate (also termed tartronate semialdehyde) [H]
COG id: COG3622
COG function: function code G; Hydroxypyruvate isomerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hyi family [H]
Homologues:
Organism=Homo sapiens, GI300068962, Length=258, Percent_Identity=41.8604651162791, Blast_Score=189, Evalue=3e-48, Organism=Homo sapiens, GI300068964, Length=242, Percent_Identity=40.0826446280992, Blast_Score=164, Evalue=1e-40, Organism=Escherichia coli, GI1786718, Length=254, Percent_Identity=56.6929133858268, Blast_Score=298, Evalue=3e-82, Organism=Escherichia coli, GI1789095, Length=254, Percent_Identity=42.9133858267717, Blast_Score=239, Evalue=2e-64, Organism=Caenorhabditis elegans, GI17552022, Length=238, Percent_Identity=39.4957983193277, Blast_Score=170, Evalue=6e-43, Organism=Drosophila melanogaster, GI17530883, Length=257, Percent_Identity=35.408560311284, Blast_Score=169, Evalue=2e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017643 - InterPro: IPR013022 - InterPro: IPR012307 [H]
Pfam domain/function: PF01261 AP_endonuc_2 [H]
EC number: =5.3.1.22 [H]
Molecular weight: Translated: 29478; Mature: 29347
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHFAANLTMLFNELPFLERFAAAKAAGFSGVEYLFPYEFDKAELREQLARHGLTQVLHN CCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHH LPAGNWAAGERGIAILPDRVDDFREGVRRGIEYARALDCRQLNCLVGIAPDGADPRELNQ CCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHH TLLRNLRFAATALKAQGIKLLIEPINTLDIPGFFLNRTAQALQLISDVESDNLFVQYDIY HHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEE HMQIMEGDLARTLQKHLARIAHIQLADNPGRHEPGTGEINYAYLFRHLDAIGYAGWVGCE EEEEHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEECCC YKPRTKTEEGLGWLTERAAVTSS CCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure PHFAANLTMLFNELPFLERFAAAKAAGFSGVEYLFPYEFDKAELREQLARHGLTQVLHN CCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHH LPAGNWAAGERGIAILPDRVDDFREGVRRGIEYARALDCRQLNCLVGIAPDGADPRELNQ CCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHH TLLRNLRFAATALKAQGIKLLIEPINTLDIPGFFLNRTAQALQLISDVESDNLFVQYDIY HHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEE HMQIMEGDLARTLQKHLARIAHIQLADNPGRHEPGTGEINYAYLFRHLDAIGYAGWVGCE EEEEHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEECCC YKPRTKTEEGLGWLTERAAVTSS CCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8440684; 10561547; 9278503 [H]