Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

Click here to switch to the map view.

The map label for this gene is DprA [H]

Identifier: 146341416

GI number: 146341416

Start: 4705759

End: 4706874

Strand: Direct

Name: DprA [H]

Synonym: BRADO4506

Alternate gene names: 146341416

Gene position: 4705759-4706874 (Clockwise)

Preceding gene: 146341415

Following gene: 146341418

Centisome position: 63.11

GC content: 70.61

Gene sequence:

>1116_bases
GTGGACGCCATCAATCCAACCACCGAACTCAGCGCGACCGAGCGGCGCGACCGGCTACGCCTGATCCGCTCGGATCATGT
CGGTCCGCGCACCTTCCGGGCCCTGCTCGACCAGTTCGGCACCGCGCGGCGCGCGCTGGATCGCCTGCCGGAGCTGGCCC
GTCGTGGCGGCGCGAGCGCCGGCCGGATCTGCTCGATTGACGAAGCCGAAGCCGAGCTCGAGGCCTGCCGCCGGCAAGGC
CTGAAGCTGCGGGCGCCGGAAGAGGACGGTTACCCGCCGCGGCTCGCGACCTGTGAGGACGCGCCGCCTTTGCTTGTCAT
CCGCGGCGACCGGGACACCCTGACGCGTCCGATGATCGCCATCGTGGGATCACGCAATGCCTCCGCCGCGGGGCTCAAAT
TTGCTGGCCTGCTCGCGCATGAGCTCGGACAGGCCGGCTTCATCATCATCTCCGGCCTGGCCCGCGGCATCGATCAGGCC
GCGCATCGCGCCAGTGTCGCAAGCGGAACCGTCGCGGTGCTCGCCGGCGGCCACGACCGGATCTATCCGCCCGAGCATGT
CGACCTGCTCGGCGCCATCATCGGCAGCCATGGCGCCGCGATCTCGGAGATGCCGCTGGGCCATGAGCCCCGCGCGCGCG
ACTTTCCCCGCCGCAACCGGCTGATCTCCGGCGCCTCGCTCGGCGTCGTCGTGGTGGAGGCTGCGCATCGCTCGGGCTCG
CTGATCACCGCCCGCATGGCCAGCGAACAGGGCCGCGAGGTGTTCGCCGTGCCGGGATCGCCGCTCGATCCCCGCTCGGC
CGGCACCAACGATCTCATCAAGCAGGGCGCGACCCTCGTCACAACCGCCGCGGATATCATCCAGGCCGTCGGACCGATCA
TGGAGCGGCCGCTGCCCCTGTCGCTGCGGGAGCCGGACGAGGAGCTGTTCGCCCCCGATCCCGAGAGTCACGACCGCACA
CAGATCCTCGGCCTGCTTGGCCCGACGCCTGTGTCCATCGACGACCTGATCCGGATGAGCGGCCTGTCACCGGCCGTGCT
GCGCATGGTGCTGCTCGAGCTCGAGCTGGCCGGCCGCTTGGAGCGGCACGGTGGCGGGATGGTGTCGCTGATCTAG

Upstream 100 bases:

>100_bases
ATGACGGACGACACGCGCGAAGTGGCCCTGACGTAGCGCACCCTCTTCCCTGCGCCCTCGGGTTGTTCCATGTTGGGCCC
TCTGCGAGGGGGGGCTTCGC

Downstream 100 bases:

>100_bases
CGCCTGCGCCATCAGCTCAGGCTGCGCTTGCTCCGTAGCCGCAGGTGCTCCTCAGCTTCGAGATTGGCCATGCGCAGGAG
ATAGTCGAGCATGTCGAGGT

Product: DNA processing chain A (DprA/Smf)

Products: NA

Alternate protein names: DNA-processing chain A [H]

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MDAINPTTELSATERRDRLRLIRSDHVGPRTFRALLDQFGTARRALDRLPELARRGGASAGRICSIDEAEAELEACRRQG
LKLRAPEEDGYPPRLATCEDAPPLLVIRGDRDTLTRPMIAIVGSRNASAAGLKFAGLLAHELGQAGFIIISGLARGIDQA
AHRASVASGTVAVLAGGHDRIYPPEHVDLLGAIIGSHGAAISEMPLGHEPRARDFPRRNRLISGASLGVVVVEAAHRSGS
LITARMASEQGREVFAVPGSPLDPRSAGTNDLIKQGATLVTTAADIIQAVGPIMERPLPLSLREPDEELFAPDPESHDRT
QILGLLGPTPVSIDDLIRMSGLSPAVLRMVLLELELAGRLERHGGGMVSLI

Sequences:

>Translated_371_residues
MDAINPTTELSATERRDRLRLIRSDHVGPRTFRALLDQFGTARRALDRLPELARRGGASAGRICSIDEAEAELEACRRQG
LKLRAPEEDGYPPRLATCEDAPPLLVIRGDRDTLTRPMIAIVGSRNASAAGLKFAGLLAHELGQAGFIIISGLARGIDQA
AHRASVASGTVAVLAGGHDRIYPPEHVDLLGAIIGSHGAAISEMPLGHEPRARDFPRRNRLISGASLGVVVVEAAHRSGS
LITARMASEQGREVFAVPGSPLDPRSAGTNDLIKQGATLVTTAADIIQAVGPIMERPLPLSLREPDEELFAPDPESHDRT
QILGLLGPTPVSIDDLIRMSGLSPAVLRMVLLELELAGRLERHGGGMVSLI
>Mature_371_residues
MDAINPTTELSATERRDRLRLIRSDHVGPRTFRALLDQFGTARRALDRLPELARRGGASAGRICSIDEAEAELEACRRQG
LKLRAPEEDGYPPRLATCEDAPPLLVIRGDRDTLTRPMIAIVGSRNASAAGLKFAGLLAHELGQAGFIIISGLARGIDQA
AHRASVASGTVAVLAGGHDRIYPPEHVDLLGAIIGSHGAAISEMPLGHEPRARDFPRRNRLISGASLGVVVVEAAHRSGS
LITARMASEQGREVFAVPGSPLDPRSAGTNDLIKQGATLVTTAADIIQAVGPIMERPLPLSLREPDEELFAPDPESHDRT
QILGLLGPTPVSIDDLIRMSGLSPAVLRMVLLELELAGRLERHGGGMVSLI

Specific function: Essential for efficient chromosomal DNA transformation but not required for plasmid transformation [H]

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

Organism=Escherichia coli, GI48994932, Length=340, Percent_Identity=37.0588235294118, Blast_Score=178, Evalue=5e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 39510; Mature: 39510

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAINPTTELSATERRDRLRLIRSDHVGPRTFRALLDQFGTARRALDRLPELARRGGASA
CCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GRICSIDEAEAELEACRRQGLKLRAPEEDGYPPRLATCEDAPPLLVIRGDRDTLTRPMIA
CCEECCHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCEEEEECCCHHHHCCCEE
IVGSRNASAAGLKFAGLLAHELGQAGFIIISGLARGIDQAAHRASVASGTVAVLAGGHDR
EEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC
IYPPEHVDLLGAIIGSHGAAISEMPLGHEPRARDFPRRNRLISGASLGVVVVEAAHRSGS
CCCCHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCHHHCEECCCCCCEEEEEECCCCCC
LITARMASEQGREVFAVPGSPLDPRSAGTNDLIKQGATLVTTAADIIQAVGPIMERPLPL
EEEEEHHHHCCCEEEECCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC
SLREPDEELFAPDPESHDRTQILGLLGPTPVSIDDLIRMSGLSPAVLRMVLLELELAGRL
CCCCCCHHHCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHH
ERHGGGMVSLI
HHCCCCEEEEC
>Mature Secondary Structure
MDAINPTTELSATERRDRLRLIRSDHVGPRTFRALLDQFGTARRALDRLPELARRGGASA
CCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GRICSIDEAEAELEACRRQGLKLRAPEEDGYPPRLATCEDAPPLLVIRGDRDTLTRPMIA
CCEECCHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCEEEEECCCHHHHCCCEE
IVGSRNASAAGLKFAGLLAHELGQAGFIIISGLARGIDQAAHRASVASGTVAVLAGGHDR
EEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC
IYPPEHVDLLGAIIGSHGAAISEMPLGHEPRARDFPRRNRLISGASLGVVVVEAAHRSGS
CCCCHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCHHHCEECCCCCCEEEEEECCCCCC
LITARMASEQGREVFAVPGSPLDPRSAGTNDLIKQGATLVTTAADIIQAVGPIMERPLPL
EEEEEHHHHCCCEEEECCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC
SLREPDEELFAPDPESHDRTQILGLLGPTPVSIDDLIRMSGLSPAVLRMVLLELELAGRL
CCCCCCHHHCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHH
ERHGGGMVSLI
HHCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7768823; 7542800 [H]