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The map label for this gene is yccU [H]

Identifier: 146341149

GI number: 146341149

Start: 4420519

End: 4421103

Strand: Direct

Name: yccU [H]

Synonym: BRADO4220

Alternate gene names: 146341149

Gene position: 4420519-4421103 (Clockwise)

Preceding gene: 146341148

Following gene: 146341150

Centisome position: 59.28

GC content: 63.93

Gene sequence:

>585_bases
ATGAATCACGACACCTACCCCGACGACTACATCCGCGGCATTCTCAACGGCGTGAAGGTGATCGCGATGGTCGGCGCCTC
GCCGTCCGAGATCCGGCCGAGCTTCTTCGCCTTCAAATATCTGGTGCAGCGCGGCTACGACATGATTCCGGTGAATCCCG
GTCATGTCGGTAAGAGCCTGATGGGCCGCCCGTTCGTCGCCTCGCTCGCCGACATCAACCGTCCGCTCGACATGGTCGAT
ATTTTCAGAAGCTCGCAGCACATCATGCCCGTGGTGGACGAGGCGATGAAGCTCTCCCCTTTGCCGAAGGTGATCTGGAT
GCAGCTCGGCGCGCGCGACGATGCCGCGGCCGAAAAGGCCGAGGCCGCCGGCCTGAAGGTGGTCATGAACCGCTGCCCCA
AGATCGAATATGGCCGGCTGTCGTCGGAGATCTCCTGGATGGGCGTCAACTCCCGCACCATCAGCGCCAAGCGCGCGCCG
ATCCCGACCCAAGGCATGCGATTGTCGCTGAATCGCACCAGCGTCGGTGGCGGCGCCACCGCGGCGGCCGATCGCGCCGC
GAAGGACAGAAGCGATCCGACCTGA

Upstream 100 bases:

>100_bases
ACGTCATTGCGAGCGAAGCGAAGCAATCCAGAGTCCCACCCGAGCCCCTGGATTGCTTCGCTTCGCTCGCAATGACGCAA
ACTAACAGATTGCGTGCCCC

Downstream 100 bases:

>100_bases
CGCATCTGCGAAAGAAACGTGTCGCGGTCATGGCGCGACACAGCAACGCATTTCAAATCTACCCTGACGTCGCCGCCCAC
CTTGACGGCATATGGCCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MNHDTYPDDYIRGILNGVKVIAMVGASPSEIRPSFFAFKYLVQRGYDMIPVNPGHVGKSLMGRPFVASLADINRPLDMVD
IFRSSQHIMPVVDEAMKLSPLPKVIWMQLGARDDAAAEKAEAAGLKVVMNRCPKIEYGRLSSEISWMGVNSRTISAKRAP
IPTQGMRLSLNRTSVGGGATAAADRAAKDRSDPT

Sequences:

>Translated_194_residues
MNHDTYPDDYIRGILNGVKVIAMVGASPSEIRPSFFAFKYLVQRGYDMIPVNPGHVGKSLMGRPFVASLADINRPLDMVD
IFRSSQHIMPVVDEAMKLSPLPKVIWMQLGARDDAAAEKAEAAGLKVVMNRCPKIEYGRLSSEISWMGVNSRTISAKRAP
IPTQGMRLSLNRTSVGGGATAAADRAAKDRSDPT
>Mature_194_residues
MNHDTYPDDYIRGILNGVKVIAMVGASPSEIRPSFFAFKYLVQRGYDMIPVNPGHVGKSLMGRPFVASLADINRPLDMVD
IFRSSQHIMPVVDEAMKLSPLPKVIWMQLGARDDAAAEKAEAAGLKVVMNRCPKIEYGRLSSEISWMGVNSRTISAKRAP
IPTQGMRLSLNRTSVGGGATAAADRAAKDRSDPT

Specific function: Unknown

COG id: COG1832

COG function: function code R; Predicted CoA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081810, Length=130, Percent_Identity=46.9230769230769, Blast_Score=115, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003781
- InterPro:   IPR016040 [H]

Pfam domain/function: PF02629 CoA_binding [H]

EC number: NA

Molecular weight: Translated: 21131; Mature: 21131

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHDTYPDDYIRGILNGVKVIAMVGASPSEIRPSFFAFKYLVQRGYDMIPVNPGHVGKSL
CCCCCCCHHHHHHHHHHHHEEHHCCCCHHHHCHHHHHHHHHHHCCCCEECCCCCHHCHHH
MGRPFVASLADINRPLDMVDIFRSSQHIMPVVDEAMKLSPLPKVIWMQLGARDDAAAEKA
HCCCHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHH
EAAGLKVVMNRCPKIEYGRLSSEISWMGVNSRTISAKRAPIPTQGMRLSLNRTSVGGGAT
HHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEECCCCCCCCCCCEEEEECCCCCCCCCH
AAADRAAKDRSDPT
HHHHHHHCCCCCCC
>Mature Secondary Structure
MNHDTYPDDYIRGILNGVKVIAMVGASPSEIRPSFFAFKYLVQRGYDMIPVNPGHVGKSL
CCCCCCCHHHHHHHHHHHHEEHHCCCCHHHHCHHHHHHHHHHHCCCCEECCCCCHHCHHH
MGRPFVASLADINRPLDMVDIFRSSQHIMPVVDEAMKLSPLPKVIWMQLGARDDAAAEKA
HCCCHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHH
EAAGLKVVMNRCPKIEYGRLSSEISWMGVNSRTISAKRAPIPTQGMRLSLNRTSVGGGAT
HHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCEECCCCCCCCCCCEEEEECCCCCCCCCH
AAADRAAKDRSDPT
HHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 9868784 [H]