Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is metC [H]
Identifier: 146341150
GI number: 146341150
Start: 4421330
End: 4422613
Strand: Direct
Name: metC [H]
Synonym: BRADO4221
Alternate gene names: 146341150
Gene position: 4421330-4422613 (Clockwise)
Preceding gene: 146341149
Following gene: 146341151
Centisome position: 59.29
GC content: 66.67
Gene sequence:
>1284_bases ATGACCGAACGTGCCCCCGGATTTTCCACCCTCGCCATTCACGCCGGCGCCCAGCCCGACCCGACCACCGGCGCGCGGGC GACACCGATCTACCAGACCACGTCTTTCGTCTTCAACGACGCCGACCACGCCGCCTCGCTGTTCGGGCTGCAGGCGTTCG GCAACATCTACACCCGCATCGGCAACCCGACCAACGCCGTGCTCGAGGAGCGCGTCGCAGCCCTCGAGGGCGGCACCGCC GCGCTCGCGGTCGCCTCGGGCCATGCCGCGCAGGTCGTGGCGCTGCAGCAGCTGCTGTCCCCCGGCGACGAATTCATCGC CGCGCGAAAACTCTATGGCGGTTCGATCAACCAGTTCACGCATTCGTTCAAGAGCTTCGGCTGGAACGTGGTGTGGGCCG ACACCGATGACGTCGCGAGCTTCGAGGCCGCGGTGAGCCCGCGCACCAAGGCGATCTTCATCGAGTCCATCGCCAATCCC GGCGGCACCATCACCGACATCGAGGCGATCGCGCAGGTCGCGCGGAAAGCGGGCGTGCCGCTGATCGTCGACAACACCCT GGCCTCGCCCTATCTGATCCGCCCGATCGATCACGGCGCCGACATCGTGCTGCACTCGCTGACCAAGTTCCTCGGCGGCC ACGGCAACTCGATCGGCGGCATCATCGTCGACGCCGGCACGTTCGACTGGGCCGGCAGCGGCGACAAATATCCGATGCTG ACGCAGCCGCGTCCCGAATATCATGGCATTCGCATCCACGAGACCTTCGGCAATTTCGCCTTCGCGATCGCCTGCCGCGT GCTCGGCCTGCGCGATCTCGGCCCCGCGCTGTCGCCGTTCAACGCGTTCCTGATCCTCACCGGCATCGAGACCCTGCCGC TGCGCGTGCAGAAGCACAGCGACAACGCCAAGGCCGTCGCCGAATATCTCAGCAAGCACCCGGCGGTCGCCTCGGTCAGC TATGCCGGCCTGCCCGAGGACAAGTACCACGCGCTCGCCCGCAAATATTCGCCGAAGGGCGCCGGCGCGGTGTTCACCTT CTCGCTGAAGGGCGGCTACGACGCCGGCGTCAAGCTGGTGTCCAATTTGAAGCTGTTCTCGCATCTCGCCAATGTCGGCG ACACCCGCTCGCTGGTGATCCACCCGGCCTCGACCACGCACAGCCAGCTCGACGACGCCTCGAAGATCAAGGCGGGCGCC GGCCCCGACATCGTCCGCATCTCCGTCGGCATCGAGGACAAGGAAGACCTGATCGCCGATCTCGAGCAGGCGCTGAGCGC GTAA
Upstream 100 bases:
>100_bases GAGGGAGCCGCGACGAGCGCGCGATCGACACCGTCTTCCCTCATCGATCCCCGTGCCGGCCGGCGCCGCCGCGCGAGGAA ACAAGCCCACGAGGAAACAC
Downstream 100 bases:
>100_bases GGCTCGCGCACGAACGCGGTCGATAGCCGCCGCAAGCATCTCTCGCAGTCGCTTGCGGCGTCCTTCGAGACCGCCTTCAG CGGGCTCCTCAGGACGAGGT
Product: O-acetylhomoserine aminocarboxypropyltransferase
Products: NA
Alternate protein names: L-methioninase [H]
Number of amino acids: Translated: 427; Mature: 426
Protein sequence:
>427_residues MTERAPGFSTLAIHAGAQPDPTTGARATPIYQTTSFVFNDADHAASLFGLQAFGNIYTRIGNPTNAVLEERVAALEGGTA ALAVASGHAAQVVALQQLLSPGDEFIAARKLYGGSINQFTHSFKSFGWNVVWADTDDVASFEAAVSPRTKAIFIESIANP GGTITDIEAIAQVARKAGVPLIVDNTLASPYLIRPIDHGADIVLHSLTKFLGGHGNSIGGIIVDAGTFDWAGSGDKYPML TQPRPEYHGIRIHETFGNFAFAIACRVLGLRDLGPALSPFNAFLILTGIETLPLRVQKHSDNAKAVAEYLSKHPAVASVS YAGLPEDKYHALARKYSPKGAGAVFTFSLKGGYDAGVKLVSNLKLFSHLANVGDTRSLVIHPASTTHSQLDDASKIKAGA GPDIVRISVGIEDKEDLIADLEQALSA
Sequences:
>Translated_427_residues MTERAPGFSTLAIHAGAQPDPTTGARATPIYQTTSFVFNDADHAASLFGLQAFGNIYTRIGNPTNAVLEERVAALEGGTA ALAVASGHAAQVVALQQLLSPGDEFIAARKLYGGSINQFTHSFKSFGWNVVWADTDDVASFEAAVSPRTKAIFIESIANP GGTITDIEAIAQVARKAGVPLIVDNTLASPYLIRPIDHGADIVLHSLTKFLGGHGNSIGGIIVDAGTFDWAGSGDKYPML TQPRPEYHGIRIHETFGNFAFAIACRVLGLRDLGPALSPFNAFLILTGIETLPLRVQKHSDNAKAVAEYLSKHPAVASVS YAGLPEDKYHALARKYSPKGAGAVFTFSLKGGYDAGVKLVSNLKLFSHLANVGDTRSLVIHPASTTHSQLDDASKIKAGA GPDIVRISVGIEDKEDLIADLEQALSA >Mature_426_residues TERAPGFSTLAIHAGAQPDPTTGARATPIYQTTSFVFNDADHAASLFGLQAFGNIYTRIGNPTNAVLEERVAALEGGTAA LAVASGHAAQVVALQQLLSPGDEFIAARKLYGGSINQFTHSFKSFGWNVVWADTDDVASFEAAVSPRTKAIFIESIANPG GTITDIEAIAQVARKAGVPLIVDNTLASPYLIRPIDHGADIVLHSLTKFLGGHGNSIGGIIVDAGTFDWAGSGDKYPMLT QPRPEYHGIRIHETFGNFAFAIACRVLGLRDLGPALSPFNAFLILTGIETLPLRVQKHSDNAKAVAEYLSKHPAVASVSY AGLPEDKYHALARKYSPKGAGAVFTFSLKGGYDAGVKLVSNLKLFSHLANVGDTRSLVIHPASTTHSQLDDASKIKAGAG PDIVRISVGIEDKEDLIADLEQALSA
Specific function: Methionine biosynthesis; second step. [C]
COG id: COG2873
COG function: function code E; O-acetylhomoserine sulfhydrylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the trans-sulfuration enzymes family [H]
Homologues:
Organism=Homo sapiens, GI21361334, Length=428, Percent_Identity=34.1121495327103, Blast_Score=202, Evalue=7e-52, Organism=Homo sapiens, GI299473759, Length=428, Percent_Identity=30.3738317757009, Blast_Score=162, Evalue=4e-40, Organism=Homo sapiens, GI25453487, Length=427, Percent_Identity=29.9765807962529, Blast_Score=147, Evalue=2e-35, Organism=Escherichia coli, GI1790375, Length=419, Percent_Identity=30.7875894988067, Blast_Score=204, Evalue=8e-54, Organism=Escherichia coli, GI1789383, Length=426, Percent_Identity=25.3521126760563, Blast_Score=122, Evalue=6e-29, Organism=Caenorhabditis elegans, GI71980708, Length=426, Percent_Identity=32.3943661971831, Blast_Score=208, Evalue=5e-54, Organism=Caenorhabditis elegans, GI17560056, Length=423, Percent_Identity=32.8605200945626, Blast_Score=197, Evalue=7e-51, Organism=Caenorhabditis elegans, GI17538055, Length=424, Percent_Identity=33.7264150943396, Blast_Score=197, Evalue=1e-50, Organism=Saccharomyces cerevisiae, GI6323333, Length=433, Percent_Identity=47.1131639722864, Blast_Score=355, Evalue=1e-98, Organism=Saccharomyces cerevisiae, GI6319307, Length=429, Percent_Identity=31.2354312354312, Blast_Score=181, Evalue=2e-46, Organism=Saccharomyces cerevisiae, GI6321254, Length=443, Percent_Identity=26.86230248307, Blast_Score=121, Evalue=3e-28, Organism=Saccharomyces cerevisiae, GI6321904, Length=427, Percent_Identity=26.9320843091335, Blast_Score=103, Evalue=4e-23, Organism=Saccharomyces cerevisiae, GI6321170, Length=365, Percent_Identity=26.3013698630137, Blast_Score=97, Evalue=6e-21, Organism=Drosophila melanogaster, GI19922554, Length=424, Percent_Identity=31.3679245283019, Blast_Score=192, Evalue=5e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000277 - InterPro: IPR006237 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF01053 Cys_Met_Meta_PP [H]
EC number: =4.4.1.11 [H]
Molecular weight: Translated: 45065; Mature: 44934
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: PS00868 CYS_MET_METAB_PP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTERAPGFSTLAIHAGAQPDPTTGARATPIYQTTSFVFNDADHAASLFGLQAFGNIYTRI CCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEHHHEECCCHHHHHHHHHHHHHHHHHHC GNPTNAVLEERVAALEGGTAALAVASGHAAQVVALQQLLSPGDEFIAARKLYGGSINQFT CCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHH HSFKSFGWNVVWADTDDVASFEAAVSPRTKAIFIESIANPGGTITDIEAIAQVARKAGVP HHHHHCCCEEEEECCCCHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCC LIVDNTLASPYLIRPIDHGADIVLHSLTKFLGGHGNSIGGIIVDAGTFDWAGSGDKYPML EEEECCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCC TQPRPEYHGIRIHETFGNFAFAIACRVLGLRDLGPALSPFNAFLILTGIETLPLRVQKHS CCCCCCCCCEEEEECHHHHHHHHHHHHHCHHHCCCCCCCCCEEEEEECCCCCEEEEEECC DNAKAVAEYLSKHPAVASVSYAGLPEDKYHALARKYSPKGAGAVFTFSLKGGYDAGVKLV CCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHH SNLKLFSHLANVGDTRSLVIHPASTTHSQLDDASKIKAGAGPDIVRISVGIEDKEDLIAD HHHHHHHHHHCCCCCCEEEEECCCCCHHHCCCHHHHCCCCCCCEEEEEECCCCHHHHHHH LEQALSA HHHHHCC >Mature Secondary Structure TERAPGFSTLAIHAGAQPDPTTGARATPIYQTTSFVFNDADHAASLFGLQAFGNIYTRI CCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEHHHEECCCHHHHHHHHHHHHHHHHHHC GNPTNAVLEERVAALEGGTAALAVASGHAAQVVALQQLLSPGDEFIAARKLYGGSINQFT CCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHH HSFKSFGWNVVWADTDDVASFEAAVSPRTKAIFIESIANPGGTITDIEAIAQVARKAGVP HHHHHCCCEEEEECCCCHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCC LIVDNTLASPYLIRPIDHGADIVLHSLTKFLGGHGNSIGGIIVDAGTFDWAGSGDKYPML EEEECCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCC TQPRPEYHGIRIHETFGNFAFAIACRVLGLRDLGPALSPFNAFLILTGIETLPLRVQKHS CCCCCCCCCEEEEECHHHHHHHHHHHHHCHHHCCCCCCCCCEEEEEECCCCCEEEEEECC DNAKAVAEYLSKHPAVASVSYAGLPEDKYHALARKYSPKGAGAVFTFSLKGGYDAGVKLV CCHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHH SNLKLFSHLANVGDTRSLVIHPASTTHSQLDDASKIKAGAGPDIVRISVGIEDKEDLIAD HHHHHHHHHHCCCCCCEEEEECCCCCHHHCCCHHHHCCCCCCCEEEEEECCCCHHHHHHH LEQALSA HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8586629; 9190812; 3365412 [H]