Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146340855
Identifier: 146340855
GI number: 146340855
Start: 4097078
End: 4097869
Strand: Reverse
Name: 146340855
Synonym: BRADO3918
Alternate gene names: NA
Gene position: 4097869-4097078 (Counterclockwise)
Preceding gene: 146340856
Following gene: 146340854
Centisome position: 54.96
GC content: 66.79
Gene sequence:
>792_bases ATGTCTGCGCCCGACAGTTCTTCGCGGTCGTCAGGCTATTTCGCGCAGCTCGCGCTGGTCGGAAAATTCTCCCTGGGCCG TCTTGTGCGCCGTCCGCAGGCGGCGCCTGACGCCGCGAGCCGGCCAAATGTCCTGCGCCAGTTCCTGCTGCTCGGCGCCA TCGGCCTTGGCACGATCCTGGTGCTGATGGTCGCCTTCGACGTCTACGAGATCGGCCTGATGCCCGCGCGCGGCACCCCA AGCCTGTGGCCATGGCGCATCGTCACCGAGTTCGGCCAGGATGAATATGTGCTGGCGCTGCTGGCCGCTGGCGTCGTGGT GACGATCCTGATCGCGCCTTTATGGCCCGAGGCCACGCGCAGCCGGCTGCTGAACTTCGCGACCCATGTGCAGTATCTCT TCTTCGCGGTGCTGACCTCGGTGCTCGCCGCGCAGGCGCTGAAATACATCATCGGACGCGGTCGACCGTTCGTGGGCGGC AAGGCGAACGCCTTCAACTTCGATCCCTTCAACGGCACGCCAGCCTATTTCAGCATGCCCTCGGCCCACGCCGTGACCGC CTTCGCGCTGGCGTTCGCCGTCGGCGCGGTCTGGCCGCGGCTGCGAATTCCGATGTTCGTCTACGCCGTCATCATCGCCC TGAGCCGGCTGGTGCTGCTGGCCCATCATCCGAGCGACGTTGTCGGCGGCGCCGTCGTCGGACTCGCCGGCGCCATGCTG GTCCGCTACTGGTTCGCGGCACGCCGGCTCGGTTTCCGTCTGTCCAAGGACGGTCGGATCGTACCGCGCTAG
Upstream 100 bases:
>100_bases CGGGCTGCGCTACAACGTCGCCCGCCGCATCGACGGCTACAATATCTCCCAGGGCCGCCCGGTCTCGATTGCGATCTATC GCTCGGAAGGGACCGAGTAG
Downstream 100 bases:
>100_bases GGGGTTGCGAGCGGGGCCCAAGCCCCATAATAAGCCCCCGCCGCCGCAGCGCCGGGCAGGAACCGGTCCGATCACGTCAT CACGAGTCCCCATCTTGTCG
Product: putative phosphoesterase
Products: NA
Alternate protein names: Phosphoesterase PA-Phosphatase-Like Protein; Phosphatase Protein; PA-Phosphatase Related Phosphoesterase
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MSAPDSSSRSSGYFAQLALVGKFSLGRLVRRPQAAPDAASRPNVLRQFLLLGAIGLGTILVLMVAFDVYEIGLMPARGTP SLWPWRIVTEFGQDEYVLALLAAGVVVTILIAPLWPEATRSRLLNFATHVQYLFFAVLTSVLAAQALKYIIGRGRPFVGG KANAFNFDPFNGTPAYFSMPSAHAVTAFALAFAVGAVWPRLRIPMFVYAVIIALSRLVLLAHHPSDVVGGAVVGLAGAML VRYWFAARRLGFRLSKDGRIVPR
Sequences:
>Translated_263_residues MSAPDSSSRSSGYFAQLALVGKFSLGRLVRRPQAAPDAASRPNVLRQFLLLGAIGLGTILVLMVAFDVYEIGLMPARGTP SLWPWRIVTEFGQDEYVLALLAAGVVVTILIAPLWPEATRSRLLNFATHVQYLFFAVLTSVLAAQALKYIIGRGRPFVGG KANAFNFDPFNGTPAYFSMPSAHAVTAFALAFAVGAVWPRLRIPMFVYAVIIALSRLVLLAHHPSDVVGGAVVGLAGAML VRYWFAARRLGFRLSKDGRIVPR >Mature_262_residues SAPDSSSRSSGYFAQLALVGKFSLGRLVRRPQAAPDAASRPNVLRQFLLLGAIGLGTILVLMVAFDVYEIGLMPARGTPS LWPWRIVTEFGQDEYVLALLAAGVVVTILIAPLWPEATRSRLLNFATHVQYLFFAVLTSVLAAQALKYIIGRGRPFVGGK ANAFNFDPFNGTPAYFSMPSAHAVTAFALAFAVGAVWPRLRIPMFVYAVIIALSRLVLLAHHPSDVVGGAVVGLAGAMLV RYWFAARRLGFRLSKDGRIVPR
Specific function: Unknown
COG id: COG0671
COG function: function code I; Membrane-associated phospholipid phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28486; Mature: 28355
Theoretical pI: Translated: 11.51; Mature: 11.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPDSSSRSSGYFAQLALVGKFSLGRLVRRPQAAPDAASRPNVLRQFLLLGAIGLGTIL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH VLMVAFDVYEIGLMPARGTPSLWPWRIVTEFGQDEYVLALLAAGVVVTILIAPLWPEATR HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHH SRLLNFATHVQYLFFAVLTSVLAAQALKYIIGRGRPFVGGKANAFNFDPFNGTPAYFSMP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECC SAHAVTAFALAFAVGAVWPRLRIPMFVYAVIIALSRLVLLAHHPSDVVGGAVVGLAGAML CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH VRYWFAARRLGFRLSKDGRIVPR HHHHHHHHHHCCEECCCCCCCCC >Mature Secondary Structure SAPDSSSRSSGYFAQLALVGKFSLGRLVRRPQAAPDAASRPNVLRQFLLLGAIGLGTIL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH VLMVAFDVYEIGLMPARGTPSLWPWRIVTEFGQDEYVLALLAAGVVVTILIAPLWPEATR HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHH SRLLNFATHVQYLFFAVLTSVLAAQALKYIIGRGRPFVGGKANAFNFDPFNGTPAYFSMP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECC SAHAVTAFALAFAVGAVWPRLRIPMFVYAVIIALSRLVLLAHHPSDVVGGAVVGLAGAML CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH VRYWFAARRLGFRLSKDGRIVPR HHHHHHHHHHCCEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA