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The map label for this gene is arnC [H]

Identifier: 146340854

GI number: 146340854

Start: 4096246

End: 4096983

Strand: Reverse

Name: arnC [H]

Synonym: BRADO3917

Alternate gene names: 146340854

Gene position: 4096983-4096246 (Counterclockwise)

Preceding gene: 146340855

Following gene: 146340853

Centisome position: 54.94

GC content: 65.72

Gene sequence:

>738_bases
TTGTCGACCGAAACCCCCGTTGCCGTCTCCATCGTCGTTCCCGTGCGCAACGAGGCCGGCAACATCACGCCGCTGATTAC
CGAGATCGCGGCTGCGCTCGACGGCCTGTGGGCTTACGAGATCATCTACGTCAATGACGGCTCGACCGACGACACCGCGC
AACGGCTCGCCGAGGAGATGGCGCGGCGGCCGAACCTGCGCGTCCTGCGGCATGAGAAATCGACGGGTCAATCCGCCGCG
GTCCGAAGCGGCATCCGCGCCGCCCATGGCGCCATCGTCGCCACGCTGGATGGCGATGGCCAGAACAATCCCGCGTTTCT
GCCCGACCTGATTGCCGCGCTCGAAAAGGGCGGCGCGGGTGTCGGCCTCGTTGCGGGCCAGCGCGTCGGCCGCAAGGACA
CCGGTTTCAAGAAGCTACAGTCGCGGCTTGCCAACAAGATCCGCAACGCGGTGCTGCATGACGGCACGCGCGACACCGGC
TGCGGCCTCAAGGCGGTGCGCCGCGATGTGTTCCTGATGATGCCGTATTTCGATGGTCTGCACCGCTTCCTGCCGGCGCT
GGTGCGGCGCGAGGGCTATGACATCGCCTATATCGACGTGATCGATCGTCCGCGGCATTCGGGCGTGTCGAATTACGGCT
TCTTCGACCGGCTGTGGATCGGGATCATGGATCTCGCCGGCGTGTGGTGGCTGATCCGCCGCAAGAAGCCGACGCCGGTC
GCGATCGAGGTGACATGA

Upstream 100 bases:

>100_bases
CGCTAGGGGGTTGCGAGCGGGGCCCAAGCCCCATAATAAGCCCCCGCCGCCGCAGCGCCGGGCAGGAACCGGTCCGATCA
CGTCATCACGAGTCCCCATC

Downstream 100 bases:

>100_bases
TGCTGATTCAATTCGGGCAGGCGTTCAGCAACTATCTCTACGACATCTTCATCGCCAAGTTCGATTTCTGGCTGGTGTTC
GGCCTCGCCGCGCAGCTCGC

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MSTETPVAVSIVVPVRNEAGNITPLITEIAAALDGLWAYEIIYVNDGSTDDTAQRLAEEMARRPNLRVLRHEKSTGQSAA
VRSGIRAAHGAIVATLDGDGQNNPAFLPDLIAALEKGGAGVGLVAGQRVGRKDTGFKKLQSRLANKIRNAVLHDGTRDTG
CGLKAVRRDVFLMMPYFDGLHRFLPALVRREGYDIAYIDVIDRPRHSGVSNYGFFDRLWIGIMDLAGVWWLIRRKKPTPV
AIEVT

Sequences:

>Translated_245_residues
MSTETPVAVSIVVPVRNEAGNITPLITEIAAALDGLWAYEIIYVNDGSTDDTAQRLAEEMARRPNLRVLRHEKSTGQSAA
VRSGIRAAHGAIVATLDGDGQNNPAFLPDLIAALEKGGAGVGLVAGQRVGRKDTGFKKLQSRLANKIRNAVLHDGTRDTG
CGLKAVRRDVFLMMPYFDGLHRFLPALVRREGYDIAYIDVIDRPRHSGVSNYGFFDRLWIGIMDLAGVWWLIRRKKPTPV
AIEVT
>Mature_244_residues
STETPVAVSIVVPVRNEAGNITPLITEIAAALDGLWAYEIIYVNDGSTDDTAQRLAEEMARRPNLRVLRHEKSTGQSAAV
RSGIRAAHGAIVATLDGDGQNNPAFLPDLIAALEKGGAGVGLVAGQRVGRKDTGFKKLQSRLANKIRNAVLHDGTRDTGC
GLKAVRRDVFLMMPYFDGLHRFLPALVRREGYDIAYIDVIDRPRHSGVSNYGFFDRLWIGIMDLAGVWWLIRRKKPTPVA
IEVT

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1788588, Length=208, Percent_Identity=31.7307692307692, Blast_Score=99, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI25146207, Length=221, Percent_Identity=25.7918552036199, Blast_Score=68, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 26828; Mature: 26697

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTETPVAVSIVVPVRNEAGNITPLITEIAAALDGLWAYEIIYVNDGSTDDTAQRLAEEM
CCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEEEEECCCCCHHHHHHHHHH
ARRPNLRVLRHEKSTGQSAAVRSGIRAAHGAIVATLDGDGQNNPAFLPDLIAALEKGGAG
HHCCCCEEEECCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCC
VGLVAGQRVGRKDTGFKKLQSRLANKIRNAVLHDGTRDTGCGLKAVRRDVFLMMPYFDGL
EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHEEECHHHHHH
HRFLPALVRREGYDIAYIDVIDRPRHSGVSNYGFFDRLWIGIMDLAGVWWLIRRKKPTPV
HHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCE
AIEVT
EEEEC
>Mature Secondary Structure 
STETPVAVSIVVPVRNEAGNITPLITEIAAALDGLWAYEIIYVNDGSTDDTAQRLAEEM
CCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEEEEECCCCCHHHHHHHHHH
ARRPNLRVLRHEKSTGQSAAVRSGIRAAHGAIVATLDGDGQNNPAFLPDLIAALEKGGAG
HHCCCCEEEECCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCC
VGLVAGQRVGRKDTGFKKLQSRLANKIRNAVLHDGTRDTGCGLKAVRRDVFLMMPYFDGL
EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHEEECHHHHHH
HRFLPALVRREGYDIAYIDVIDRPRHSGVSNYGFFDRLWIGIMDLAGVWWLIRRKKPTPV
HHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCE
AIEVT
EEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12219091 [H]