Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

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The map label for this gene is yjbB [H]

Identifier: 146340852

GI number: 146340852

Start: 4093990

End: 4095687

Strand: Direct

Name: yjbB [H]

Synonym: BRADO3915

Alternate gene names: 146340852

Gene position: 4093990-4095687 (Clockwise)

Preceding gene: 146340851

Following gene: 146340860

Centisome position: 54.9

GC content: 65.67

Gene sequence:

>1698_bases
ATGGTTCTGCTCGATCTGATGGGCGGCGTCGCGTTGCTGCTGTGGGGCCTTCACATGGTCCACAGCGGCATTCTGCGCGC
GTTTGGACCGGATCTTCGGCTGTTGCTGTCGCGCGCGCTGCGCAATCGCTTCAGCGCGCTGCTCGCCGGAGTGGGCCTCA
CGGCCCTGCTCCAGAGCAGCACGGCGACCGCGCTCATCACCACATCCTTCGCCGCCGAAGGCCTCGTCGGCCTGATCCCG
GCGCTCGCGATCATGCTCGGCGCCAATATCGGCACCACGCTGATCGTTCAGGTGCTGTCGTTCAACGTCGCCGCTGTCGC
GCCGGTGCTGTTCGTGCTCGGGCTGGTGGCGTTCCGCAGCGGACCGCGATCTCGGATCAAGGACCTTGGGCGCGTGTGCA
TCGGCCTCGGCCTGATGCTGCTGTCGCTGCATATCCTGATCGACACGCTGGCGCCCGCGGAACAGGCGCCGGCCATGCGC
GTCTTCATGCAGGCCATCACAGCGGACGTGACACTGTGCGTGATCTTCGGCGCCGTCGTCACCTGGATCGTGCATTCCAG
CGTCGCCAGCGTGCTGCTGGTGATGTCGCTCGCCTATGCGCATTTCATCACCGCCGATGCGGCGCTCGCGCTGGTGCTCG
GAGCCAATCTCGGCAGTGCCGTGAATCCCGTGTTCGAAGGGGCGAAGCGTGACAATCCGGCGAGCTATCGTCTGCCGGTC
GGCAACCTTCTCAACCGCATCATCGGCATTGCCCTGATCGTGCCCTTCCTGCATCCGCTCGCCGCGCAGCTGCAGCTGTG
GCAGCCGGATCTGTCGAAGCTGACGGCCCAGTTCCACATGGCCTTCAATCTCGGCACAGCGGCGGCGTTCATCGGCCTGC
TCGGCGGGATGGAGAAGATTCTCGTACGGCTGTTTCCGGACCGCCCGGCCGAGGTCGATCCGGCAAAGCCGCGCTATCTC
GATGAAGCCGCGCTGGAGACTCCGTCGCTCGCCCTCGCCGATGCCGCGCGCGAAGCGCTGCGCATGGGCGACCTGGTCGA
GACCATGCTGCGCAACGTGATGACGGCGATGATGACCAACGATCGCGGTCTGGTCGATCAGGTCTCGCGCACCGACAACA
TCGTCGACCGGCTCGACGAGGCGATCAAGCTCTACATCACCAAGCTCACCCGCGGCAGCCTCGACGAGCGCGAGGGCAAG
CGCGCGATGGAAATCATCTCCTTCGCGATCAACCTCGAGCATATCGGCGACATCATCGACAAGAACCTGAGCGAGCTCGC
CACCAAGAAGATCAAGCGGCGCTTCCAGTTCTCGATCGAAGGCGCCGACGAGCTGCAGTCGTTCCACCGCCAGATCATGG
AATCGCTGCGCATTGCCTTCGGTATCTTCATGTCGGGCGACGCGCAGCGGGCGCATCGCCTGCTCGACCAGAAGGCCGAG
CTCCGCAATGCCGAGCTCGCCGCCACCGAGCGGCACCTGGAGCGCCTGCGCGAAGGCCGTTCCGAGACGCTGGAAACCAC
GTCGCTGCATCTCGACGTGCTGCGCGATCTCCGGCGCATCCACTCGCACATCTGCTCGGTCGCTTATCCGGTGCTTGATG
CGGCGGGTGAAGTGGCGACGCGCCGGAGTGACGTGGCGGACGGCGTGGCACCCATCAGCCCCCTGTCCCCATCGCAAGCC
CAGCCGCTGCCGCGCTGA

Upstream 100 bases:

>100_bases
AACGCCCGGCGATCAGGCAGCCGGGGCCGACAAAATAGCGTTGATCCCCGGCGGATTGGGCGTAGCCTTCGCGGCAGGGC
TACGGACACGAACGGGAATC

Downstream 100 bases:

>100_bases
GCGCCTTGCGGGCTGCGAATTAGTTCGCTCCGTCATGGCCGGGCTTGTCCTGGCATCCACGTTGTCCGGCATGCTCGGCT
CGACGTGGATGCCCGGGACA

Product: putative Na+/phosphate transporter membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 565; Mature: 565

Protein sequence:

>565_residues
MVLLDLMGGVALLLWGLHMVHSGILRAFGPDLRLLLSRALRNRFSALLAGVGLTALLQSSTATALITTSFAAEGLVGLIP
ALAIMLGANIGTTLIVQVLSFNVAAVAPVLFVLGLVAFRSGPRSRIKDLGRVCIGLGLMLLSLHILIDTLAPAEQAPAMR
VFMQAITADVTLCVIFGAVVTWIVHSSVASVLLVMSLAYAHFITADAALALVLGANLGSAVNPVFEGAKRDNPASYRLPV
GNLLNRIIGIALIVPFLHPLAAQLQLWQPDLSKLTAQFHMAFNLGTAAAFIGLLGGMEKILVRLFPDRPAEVDPAKPRYL
DEAALETPSLALADAAREALRMGDLVETMLRNVMTAMMTNDRGLVDQVSRTDNIVDRLDEAIKLYITKLTRGSLDEREGK
RAMEIISFAINLEHIGDIIDKNLSELATKKIKRRFQFSIEGADELQSFHRQIMESLRIAFGIFMSGDAQRAHRLLDQKAE
LRNAELAATERHLERLREGRSETLETTSLHLDVLRDLRRIHSHICSVAYPVLDAAGEVATRRSDVADGVAPISPLSPSQA
QPLPR

Sequences:

>Translated_565_residues
MVLLDLMGGVALLLWGLHMVHSGILRAFGPDLRLLLSRALRNRFSALLAGVGLTALLQSSTATALITTSFAAEGLVGLIP
ALAIMLGANIGTTLIVQVLSFNVAAVAPVLFVLGLVAFRSGPRSRIKDLGRVCIGLGLMLLSLHILIDTLAPAEQAPAMR
VFMQAITADVTLCVIFGAVVTWIVHSSVASVLLVMSLAYAHFITADAALALVLGANLGSAVNPVFEGAKRDNPASYRLPV
GNLLNRIIGIALIVPFLHPLAAQLQLWQPDLSKLTAQFHMAFNLGTAAAFIGLLGGMEKILVRLFPDRPAEVDPAKPRYL
DEAALETPSLALADAAREALRMGDLVETMLRNVMTAMMTNDRGLVDQVSRTDNIVDRLDEAIKLYITKLTRGSLDEREGK
RAMEIISFAINLEHIGDIIDKNLSELATKKIKRRFQFSIEGADELQSFHRQIMESLRIAFGIFMSGDAQRAHRLLDQKAE
LRNAELAATERHLERLREGRSETLETTSLHLDVLRDLRRIHSHICSVAYPVLDAAGEVATRRSDVADGVAPISPLSPSQA
QPLPR
>Mature_565_residues
MVLLDLMGGVALLLWGLHMVHSGILRAFGPDLRLLLSRALRNRFSALLAGVGLTALLQSSTATALITTSFAAEGLVGLIP
ALAIMLGANIGTTLIVQVLSFNVAAVAPVLFVLGLVAFRSGPRSRIKDLGRVCIGLGLMLLSLHILIDTLAPAEQAPAMR
VFMQAITADVTLCVIFGAVVTWIVHSSVASVLLVMSLAYAHFITADAALALVLGANLGSAVNPVFEGAKRDNPASYRLPV
GNLLNRIIGIALIVPFLHPLAAQLQLWQPDLSKLTAQFHMAFNLGTAAAFIGLLGGMEKILVRLFPDRPAEVDPAKPRYL
DEAALETPSLALADAAREALRMGDLVETMLRNVMTAMMTNDRGLVDQVSRTDNIVDRLDEAIKLYITKLTRGSLDEREGK
RAMEIISFAINLEHIGDIIDKNLSELATKKIKRRFQFSIEGADELQSFHRQIMESLRIAFGIFMSGDAQRAHRLLDQKAE
LRNAELAATERHLERLREGRSETLETTSLHLDVLRDLRRIHSHICSVAYPVLDAAGEVATRRSDVADGVAPISPLSPSQA
QPLPR

Specific function: Unknown

COG id: COG1283

COG function: function code P; Na+/phosphate symporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yqeW [H]

Homologues:

Organism=Escherichia coli, GI1790451, Length=537, Percent_Identity=38.1750465549348, Blast_Score=340, Evalue=1e-94,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003841
- InterPro:   IPR004633 [H]

Pfam domain/function: PF02690 Na_Pi_cotrans [H]

EC number: NA

Molecular weight: Translated: 61247; Mature: 61247

Theoretical pI: Translated: 7.80; Mature: 7.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLLDLMGGVALLLWGLHMVHSGILRAFGPDLRLLLSRALRNRFSALLAGVGLTALLQSS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TATALITTSFAAEGLVGLIPALAIMLGANIGTTLIVQVLSFNVAAVAPVLFVLGLVAFRS
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC
GPRSRIKDLGRVCIGLGLMLLSLHILIDTLAPAEQAPAMRVFMQAITADVTLCVIFGAVV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCHHHHHHHHHHHHHHHHHHHHHHHH
TWIVHSSVASVLLVMSLAYAHFITADAALALVLGANLGSAVNPVFEGAKRDNPASYRLPV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCH
GNLLNRIIGIALIVPFLHPLAAQLQLWQPDLSKLTAQFHMAFNLGTAAAFIGLLGGMEKI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVRLFPDRPAEVDPAKPRYLDEAALETPSLALADAAREALRMGDLVETMLRNVMTAMMTN
HHHHCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DRGLVDQVSRTDNIVDRLDEAIKLYITKLTRGSLDEREGKRAMEIISFAINLEHIGDIID
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KNLSELATKKIKRRFQFSIEGADELQSFHRQIMESLRIAFGIFMSGDAQRAHRLLDQKAE
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LRNAELAATERHLERLREGRSETLETTSLHLDVLRDLRRIHSHICSVAYPVLDAAGEVAT
HCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRSDVADGVAPISPLSPSQAQPLPR
HHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVLLDLMGGVALLLWGLHMVHSGILRAFGPDLRLLLSRALRNRFSALLAGVGLTALLQSS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TATALITTSFAAEGLVGLIPALAIMLGANIGTTLIVQVLSFNVAAVAPVLFVLGLVAFRS
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC
GPRSRIKDLGRVCIGLGLMLLSLHILIDTLAPAEQAPAMRVFMQAITADVTLCVIFGAVV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCHHHHHHHHHHHHHHHHHHHHHHHH
TWIVHSSVASVLLVMSLAYAHFITADAALALVLGANLGSAVNPVFEGAKRDNPASYRLPV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCH
GNLLNRIIGIALIVPFLHPLAAQLQLWQPDLSKLTAQFHMAFNLGTAAAFIGLLGGMEKI
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVRLFPDRPAEVDPAKPRYLDEAALETPSLALADAAREALRMGDLVETMLRNVMTAMMTN
HHHHCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DRGLVDQVSRTDNIVDRLDEAIKLYITKLTRGSLDEREGKRAMEIISFAINLEHIGDIID
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KNLSELATKKIKRRFQFSIEGADELQSFHRQIMESLRIAFGIFMSGDAQRAHRLLDQKAE
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LRNAELAATERHLERLREGRSETLETTSLHLDVLRDLRRIHSHICSVAYPVLDAAGEVAT
HCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRSDVADGVAPISPLSPSQAQPLPR
HHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]