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The map label for this gene is bepC [H]

Identifier: 146340822

GI number: 146340822

Start: 4058459

End: 4059844

Strand: Reverse

Name: bepC [H]

Synonym: BRADO3884

Alternate gene names: 146340822

Gene position: 4059844-4058459 (Counterclockwise)

Preceding gene: 146340823

Following gene: 146340821

Centisome position: 54.45

GC content: 64.07

Gene sequence:

>1386_bases
ATGTTTGGGGTGAAGCTCGTTACCGCGGCGGCGGCTGCGGTTCTCGTGATGGCATATGCAGGCCCGACGCCTGCACTTGC
CGACACGATCGAGGCTGCGCTTGTGCGCGCTTATCAGAACAACCCGCAACTCAATGCAACGCGGGCGCAGGTCCGGTCGG
TCGACGAAGGTGTTCCTCAGGCGCTGTCCGGATATCGGCCCAAGGTGAACCTGACCGCGTCGGCGGGCTATTCGTATACC
GACGCCCAGACCGCGCCTGCCACACCTGCTCTTCACGGCGCTCAGCGACCACGCAGCGTCGGCCTGACCGTCAATCAGAC
GCTCTATAACGGACAGCAGACTGCCAACGGCGTGCGCAAGGCGGAGGCCAACGTCTCGGGACAGCGCGAAGCGCTGCGCG
TTCTTGAGCAGCAGGTGCTGCTGCAGGCCGCGACGATCTATATGGACTATCTGCGCGACGCAGCGATCGTCGAGGTCCAG
CGCAGCAACACCCGGGTTCTCGAACAGACACTCAAGCAGACACGTGATCGTTTCAACGTCGGCGAAGTGACCCGGACCGA
CGTCGCGCAATCGGAGGCGCAGCTCGCAGCCGGCCGCACGCAGCAGCTGACGGCCGAAGCGAACCTGACGGCAACGCGCT
CGAACTTCCGCCGCATCATCGGCAACGACCCAGAAAATTTGGCGCCGGGTTCACCGGTGGACCGTTATTTGCCGCCGACG
TTGCAGCAGTCGATCGAGACCGCGCTCACCGAAAGCCCGAGTGTAACGGCGGCGATGTTCGGCATTGACGTGCAGTATCT
GGACGTCAAGATCAAGGAAGGCGCTCTGCTGCCGACCGTGACGGTTCAGGCCTCTGCGACCCAGTCCTATGAAACGGCCC
TGACCTCCTATCGCGCGTTCAATGCGGCCGCGACGGCACAGCTCAACGTGCCGATCTATCAGGGTGGCGCCGAATACTCC
CTAATCCGGCAGTCCAAGGAGACGCTGGCGCAGCAACGCCTCGCCCTGGAGCAGACGCGAGACCAGGCCCGCTCGGATGT
GGTGTCGGCATGGGGCCGGCTGCTCGCCGGCAAGGCCCAGGTACAATCGGCGCAGGCCCAGGTTGCCGCCTCCGAGATCG
CTCTGAACGGCGTCCGCGAGGAGGCCAAAGCCGGCCAGCGCACTACGCTCGATGTCCTCAACGCTCAGCAGGCGCTGGTC
AATGCGCGAAATTCGCTGGTGACTGCTCAGCACGATCGCGTGGTAGCGTCATACTCAGTGCTGCAGACGGTCGGACGTCT
CTCGCCGCAGGTGCTCAACCTGCCGACAACCACGTACGATCCCAGCGTGCATTACCAGCAGATCCGGGACAGCTGGGCGG
GTGTACGGACGCCTGATGGTCGTTAG

Upstream 100 bases:

>100_bases
CGCTTGCATGGGGCATAAGGTGCGAGGTGCGCGGGAGTCTCTTCAACAGGTTGCGGCCCGGCTCTGGCGTTCGAGCCGGT
AACGAAAGAATGGAACAGGG

Downstream 100 bases:

>100_bases
GATTTCCTTAAACTATCGAAGCAGATCCCTCGGTCCTTGGCCGGGGGATTTTTTTATGGCACATGCTGTAGTTGTGATGA
AAGCGCGACGCTTGGGCGGC

Product: putative outer membrane protein tolC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 461; Mature: 461

Protein sequence:

>461_residues
MFGVKLVTAAAAAVLVMAYAGPTPALADTIEAALVRAYQNNPQLNATRAQVRSVDEGVPQALSGYRPKVNLTASAGYSYT
DAQTAPATPALHGAQRPRSVGLTVNQTLYNGQQTANGVRKAEANVSGQREALRVLEQQVLLQAATIYMDYLRDAAIVEVQ
RSNTRVLEQTLKQTRDRFNVGEVTRTDVAQSEAQLAAGRTQQLTAEANLTATRSNFRRIIGNDPENLAPGSPVDRYLPPT
LQQSIETALTESPSVTAAMFGIDVQYLDVKIKEGALLPTVTVQASATQSYETALTSYRAFNAAATAQLNVPIYQGGAEYS
LIRQSKETLAQQRLALEQTRDQARSDVVSAWGRLLAGKAQVQSAQAQVAASEIALNGVREEAKAGQRTTLDVLNAQQALV
NARNSLVTAQHDRVVASYSVLQTVGRLSPQVLNLPTTTYDPSVHYQQIRDSWAGVRTPDGR

Sequences:

>Translated_461_residues
MFGVKLVTAAAAAVLVMAYAGPTPALADTIEAALVRAYQNNPQLNATRAQVRSVDEGVPQALSGYRPKVNLTASAGYSYT
DAQTAPATPALHGAQRPRSVGLTVNQTLYNGQQTANGVRKAEANVSGQREALRVLEQQVLLQAATIYMDYLRDAAIVEVQ
RSNTRVLEQTLKQTRDRFNVGEVTRTDVAQSEAQLAAGRTQQLTAEANLTATRSNFRRIIGNDPENLAPGSPVDRYLPPT
LQQSIETALTESPSVTAAMFGIDVQYLDVKIKEGALLPTVTVQASATQSYETALTSYRAFNAAATAQLNVPIYQGGAEYS
LIRQSKETLAQQRLALEQTRDQARSDVVSAWGRLLAGKAQVQSAQAQVAASEIALNGVREEAKAGQRTTLDVLNAQQALV
NARNSLVTAQHDRVVASYSVLQTVGRLSPQVLNLPTTTYDPSVHYQQIRDSWAGVRTPDGR
>Mature_461_residues
MFGVKLVTAAAAAVLVMAYAGPTPALADTIEAALVRAYQNNPQLNATRAQVRSVDEGVPQALSGYRPKVNLTASAGYSYT
DAQTAPATPALHGAQRPRSVGLTVNQTLYNGQQTANGVRKAEANVSGQREALRVLEQQVLLQAATIYMDYLRDAAIVEVQ
RSNTRVLEQTLKQTRDRFNVGEVTRTDVAQSEAQLAAGRTQQLTAEANLTATRSNFRRIIGNDPENLAPGSPVDRYLPPT
LQQSIETALTESPSVTAAMFGIDVQYLDVKIKEGALLPTVTVQASATQSYETALTSYRAFNAAATAQLNVPIYQGGAEYS
LIRQSKETLAQQRLALEQTRDQARSDVVSAWGRLLAGKAQVQSAQAQVAASEIALNGVREEAKAGQRTTLDVLNAQQALV
NARNSLVTAQHDRVVASYSVLQTVGRLSPQVLNLPTTTYDPSVHYQQIRDSWAGVRTPDGR

Specific function: Involved in the efflux of toxic and relatively hydrophobic compounds. Influences survival inside the host [H]

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

Organism=Escherichia coli, GI87082199, Length=422, Percent_Identity=24.1706161137441, Blast_Score=83, Evalue=4e-17,

Paralogues:

None

Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010130 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 49645; Mature: 49645

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGVKLVTAAAAAVLVMAYAGPTPALADTIEAALVRAYQNNPQLNATRAQVRSVDEGVPQ
CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHH
ALSGYRPKVNLTASAGYSYTDAQTAPATPALHGAQRPRSVGLTVNQTLYNGQQTANGVRK
HHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEECCEEEHHHHCCHHHHHHHHH
AEANVSGQREALRVLEQQVLLQAATIYMDYLRDAAIVEVQRSNTRVLEQTLKQTRDRFNV
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCC
GEVTRTDVAQSEAQLAAGRTQQLTAEANLTATRSNFRRIIGNDPENLAPGSPVDRYLPPT
CCCHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCHHCCCHH
LQQSIETALTESPSVTAAMFGIDVQYLDVKIKEGALLPTVTVQASATQSYETALTSYRAF
HHHHHHHHHCCCCCCEEHEEECEEEEEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHH
NAAATAQLNVPIYQGGAEYSLIRQSKETLAQQRLALEQTRDQARSDVVSAWGRLLAGKAQ
CCCCEEEEECEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
VQSAQAQVAASEIALNGVREEAKAGQRTTLDVLNAQQALVNARNSLVTAQHDRVVASYSV
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHH
LQTVGRLSPQVLNLPTTTYDPSVHYQQIRDSWAGVRTPDGR
HHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MFGVKLVTAAAAAVLVMAYAGPTPALADTIEAALVRAYQNNPQLNATRAQVRSVDEGVPQ
CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHH
ALSGYRPKVNLTASAGYSYTDAQTAPATPALHGAQRPRSVGLTVNQTLYNGQQTANGVRK
HHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEECCEEEHHHHCCHHHHHHHHH
AEANVSGQREALRVLEQQVLLQAATIYMDYLRDAAIVEVQRSNTRVLEQTLKQTRDRFNV
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCC
GEVTRTDVAQSEAQLAAGRTQQLTAEANLTATRSNFRRIIGNDPENLAPGSPVDRYLPPT
CCCHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCHHCCCHH
LQQSIETALTESPSVTAAMFGIDVQYLDVKIKEGALLPTVTVQASATQSYETALTSYRAF
HHHHHHHHHCCCCCCEEHEEECEEEEEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHH
NAAATAQLNVPIYQGGAEYSLIRQSKETLAQQRLALEQTRDQARSDVVSAWGRLLAGKAQ
CCCCEEEEECEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
VQSAQAQVAASEIALNGVREEAKAGQRTTLDVLNAQQALVNARNSLVTAQHDRVVASYSV
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHH
LQTVGRLSPQVLNLPTTTYDPSVHYQQIRDSWAGVRTPDGR
HHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12271122 [H]