Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146340821
Identifier: 146340821
GI number: 146340821
Start: 4057328
End: 4058077
Strand: Reverse
Name: 146340821
Synonym: BRADO3882
Alternate gene names: NA
Gene position: 4058077-4057328 (Counterclockwise)
Preceding gene: 146340822
Following gene: 146340820
Centisome position: 54.42
GC content: 66.4
Gene sequence:
>750_bases ATGACGCAGCCTGCAAAGGTCCAAGAACCCTCCATGGAGGAGATTCTGGCGTCAATCCGGCGCATCATCGCCGATGACGA GGGTAAGCCGCCGGCCGCAGAGAAGGCTGCCGCGCCCGAGCCGGCCAAGGCCGAGAAGCCGGCTGCTGCAGCGCCGGCGC CGAAGCCCGTCATGAACGACATTCCGCCGTCGAAGATCGCTGCGGCCGCCCCGAAGCCGGCGCCAGCGCCTCCGCCGCCT GCGGCCGCGGCGAGCAACAGCCAAGACGACATTGACGCATTGCTGGCGGGTTTGGATGAAACGACTGCGCCGGCAGCGGT TCAGCCGGCGCAACCCGAGCCCGAACCAGAAGTACTCGAGTTGACGGACGACATGGCCGTGGCACCACCGACACCCGCTC CAGCCCCATCTCCCGCGCCGGCGGCCGCATCCTTCCGCAAGGTGGATCCGCAGGACGACATCGAGTTCATCGAGTCCGGG CGGGTGAACCAGAAGAGCGCCAGCTTCGAAACCTCGTTCGAGACCGCCTCGCCAAGGCAGCCGATCATGGCGCCATCGAC GGTCAACGCGGTCGAATCGGCGTTCAACGCGCTCGCCAATACGGTGCTGAGCAACAACGCCCGGACGCTGGAGGATCTCG TCAAGGAGATGCTGCGGCCGATGCTCAAATCCTGGCTTGACGACAATCTGCCGGCTCTGGTCGAGCGGATCGTCAAGGCG GAAATCGAGCGGGTCTCGCGCGGCCGCTGA
Upstream 100 bases:
>100_bases TCGGAATGTCCGTTGAGAAGTCCGAGCCAGTTGGATCCGGCGCCCGTGACGGTTGCGCCGGGCCGATCCGTTCGGCGCTG TCGCTGATTTGGAGTCGGAA
Downstream 100 bases:
>100_bases GGCCAGTGACCGCGATTGGCCGATCCAGAGGTCGCAGGGGCTGCGGCCTCCCGCTGGGATCGCTATCTTTGCCGCTGCTG TTGACTTGGCAGCCTGTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 249; Mature: 248
Protein sequence:
>249_residues MTQPAKVQEPSMEEILASIRRIIADDEGKPPAAEKAAAPEPAKAEKPAAAAPAPKPVMNDIPPSKIAAAAPKPAPAPPPP AAAASNSQDDIDALLAGLDETTAPAAVQPAQPEPEPEVLELTDDMAVAPPTPAPAPSPAPAAASFRKVDPQDDIEFIESG RVNQKSASFETSFETASPRQPIMAPSTVNAVESAFNALANTVLSNNARTLEDLVKEMLRPMLKSWLDDNLPALVERIVKA EIERVSRGR
Sequences:
>Translated_249_residues MTQPAKVQEPSMEEILASIRRIIADDEGKPPAAEKAAAPEPAKAEKPAAAAPAPKPVMNDIPPSKIAAAAPKPAPAPPPP AAAASNSQDDIDALLAGLDETTAPAAVQPAQPEPEPEVLELTDDMAVAPPTPAPAPSPAPAAASFRKVDPQDDIEFIESG RVNQKSASFETSFETASPRQPIMAPSTVNAVESAFNALANTVLSNNARTLEDLVKEMLRPMLKSWLDDNLPALVERIVKA EIERVSRGR >Mature_248_residues TQPAKVQEPSMEEILASIRRIIADDEGKPPAAEKAAAPEPAKAEKPAAAAPAPKPVMNDIPPSKIAAAAPKPAPAPPPPA AAASNSQDDIDALLAGLDETTAPAAVQPAQPEPEPEVLELTDDMAVAPPTPAPAPSPAPAAASFRKVDPQDDIEFIESGR VNQKSASFETSFETASPRQPIMAPSTVNAVESAFNALANTVLSNNARTLEDLVKEMLRPMLKSWLDDNLPALVERIVKAE IERVSRGR
Specific function: Unknown
COG id: COG3827
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26101; Mature: 25969
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQPAKVQEPSMEEILASIRRIIADDEGKPPAAEKAAAPEPAKAEKPAAAAPAPKPVMND CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHC IPPSKIAAAAPKPAPAPPPPAAAASNSQDDIDALLAGLDETTAPAAVQPAQPEPEPEVLE CCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHH LTDDMAVAPPTPAPAPSPAPAAASFRKVDPQDDIEFIESGRVNQKSASFETSFETASPRQ HCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHCCCCCCHHCCCCCCCCCCCCCC PIMAPSTVNAVESAFNALANTVLSNNARTLEDLVKEMLRPMLKSWLDDNLPALVERIVKA CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH EIERVSRGR HHHHHHCCC >Mature Secondary Structure TQPAKVQEPSMEEILASIRRIIADDEGKPPAAEKAAAPEPAKAEKPAAAAPAPKPVMND CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHC IPPSKIAAAAPKPAPAPPPPAAAASNSQDDIDALLAGLDETTAPAAVQPAQPEPEPEVLE CCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHH LTDDMAVAPPTPAPAPSPAPAAASFRKVDPQDDIEFIESGRVNQKSASFETSFETASPRQ HCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHCCCCCCHHCCCCCCCCCCCCCC PIMAPSTVNAVESAFNALANTVLSNNARTLEDLVKEMLRPMLKSWLDDNLPALVERIVKA CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH EIERVSRGR HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA