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The map label for this gene is ybgL [C]

Identifier: 146340741

GI number: 146340741

Start: 3968020

End: 3968793

Strand: Reverse

Name: ybgL [C]

Synonym: BRADO3796

Alternate gene names: 146340741

Gene position: 3968793-3968020 (Counterclockwise)

Preceding gene: 146340742

Following gene: 146340736

Centisome position: 53.23

GC content: 65.76

Gene sequence:

>774_bases
ATGACCAGCACCGTCGACCTGAACTGCGACCTCGGAGAAAGCTTTGGCCCTTGGGAGATGGGCAACGACGCCGCAATGAT
CGAACTGGCGACGTCGGTCAACGTGGCCTGCGGCTTCCATGCCGGCGATGCCGACATCATGCGCCGGACGGTCGAGATGG
CGAAGGCCAAAGGCGTCAGCATCGGCGCGCATCCCGGCTATCGCGATCTGCACGGCTTCGGCCGCCGTCCGGTGCCCGGT
CTGAAATCATCGGAGATCGAGAACCTCGTCGCCTATCAGATCGGCGCGCTGCAGGCGATCGCGACTGCCGCCGGCCACAA
GGTCACGCATGTGAAGGCGCATGGCGCATTGTCCAACGTCGCCTGCGAGGACGACATGACGGCGAACGCGATCGCGAAGG
CGATCAAGGCCGTCGATCCCAGCCTGATCTTCGTCGTGCTGGCCAATTCGAAGCTGGTGACTGCGGGCGAGAAGGCGAAC
CTGTCGATGGCGCACGAGGTGTTCGCCGATCGCGCCTATGACGACAACGGCCTGCTGGTCTCACGCAGCAAGCCCGGCGC
CGTGCTGCACGATCCCAAGCAGATTGCCGACCGCGTCGTGCGCATGGTCCAGGACGGCGCTGTCGTCTCGGTGACGGGCA
AGGTGATGAAGATGCGCACCGACACCGTCTGCATTCACGGCGATACCGCCGGCGCCGTCGAGATCGCCCGCGAGGTGCGC
CAGGCGCTCGACGCGGCGGGCATCAAGGTGGCGCCGTTCAAGAGGGCGCCGTGA

Upstream 100 bases:

>100_bases
CGTCAGCGCAACCGACGTCACCACCTGGCCCGGAGTGACGCCCGATTAACCTGATCGCCGCTAACGCTGTTTCCGACCCC
TCAACGCGCGGAGCCCTGAC

Downstream 100 bases:

>100_bases
GGAGAAGGAGCTTGATCAGAACGGATGCGTGAACGGCATGCCCAGCGTGATCGCTGCGATCAGGGCCACGGCCCCATAGA
ATGCGACCAGTGCCGCCGTC

Product: LamB/YcsF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 256

Protein sequence:

>257_residues
MTSTVDLNCDLGESFGPWEMGNDAAMIELATSVNVACGFHAGDADIMRRTVEMAKAKGVSIGAHPGYRDLHGFGRRPVPG
LKSSEIENLVAYQIGALQAIATAAGHKVTHVKAHGALSNVACEDDMTANAIAKAIKAVDPSLIFVVLANSKLVTAGEKAN
LSMAHEVFADRAYDDNGLLVSRSKPGAVLHDPKQIADRVVRMVQDGAVVSVTGKVMKMRTDTVCIHGDTAGAVEIAREVR
QALDAAGIKVAPFKRAP

Sequences:

>Translated_257_residues
MTSTVDLNCDLGESFGPWEMGNDAAMIELATSVNVACGFHAGDADIMRRTVEMAKAKGVSIGAHPGYRDLHGFGRRPVPG
LKSSEIENLVAYQIGALQAIATAAGHKVTHVKAHGALSNVACEDDMTANAIAKAIKAVDPSLIFVVLANSKLVTAGEKAN
LSMAHEVFADRAYDDNGLLVSRSKPGAVLHDPKQIADRVVRMVQDGAVVSVTGKVMKMRTDTVCIHGDTAGAVEIAREVR
QALDAAGIKVAPFKRAP
>Mature_256_residues
TSTVDLNCDLGESFGPWEMGNDAAMIELATSVNVACGFHAGDADIMRRTVEMAKAKGVSIGAHPGYRDLHGFGRRPVPGL
KSSEIENLVAYQIGALQAIATAAGHKVTHVKAHGALSNVACEDDMTANAIAKAIKAVDPSLIFVVLANSKLVTAGEKANL
SMAHEVFADRAYDDNGLLVSRSKPGAVLHDPKQIADRVVRMVQDGAVVSVTGKVMKMRTDTVCIHGDTAGAVEIAREVRQ
ALDAAGIKVAPFKRAP

Specific function: Unknown

COG id: COG1540

COG function: function code R; Uncharacterized proteins, homologs of lactam utilization protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0271 (lamB) family [H]

Homologues:

Organism=Escherichia coli, GI1786931, Length=247, Percent_Identity=44.9392712550607, Blast_Score=198, Evalue=3e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR005501 [H]

Pfam domain/function: PF03746 LamB_YcsF [H]

EC number: NA

Molecular weight: Translated: 27023; Mature: 26892

Theoretical pI: Translated: 7.29; Mature: 7.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSTVDLNCDLGESFGPWEMGNDAAMIELATSVNVACGFHAGDADIMRRTVEMAKAKGVS
CCCEEEECCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHCCCE
IGAHPGYRDLHGFGRRPVPGLKSSEIENLVAYQIGALQAIATAAGHKVTHVKAHGALSNV
ECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCC
ACEDDMTANAIAKAIKAVDPSLIFVVLANSKLVTAGEKANLSMAHEVFADRAYDDNGLLV
CCCCCCCHHHHHHHHHHCCCCEEEEEEECCEEEECCCCCCHHHHHHHHHHCCCCCCCEEE
SRSKPGAVLHDPKQIADRVVRMVQDGAVVSVTGKVMKMRTDTVCIHGDTAGAVEIAREVR
ECCCCCCEEECHHHHHHHHHHHHHCCCEEEEECEEEEEEECEEEEECCCCHHHHHHHHHH
QALDAAGIKVAPFKRAP
HHHHHCCCEECCCCCCC
>Mature Secondary Structure 
TSTVDLNCDLGESFGPWEMGNDAAMIELATSVNVACGFHAGDADIMRRTVEMAKAKGVS
CCEEEECCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHCCCE
IGAHPGYRDLHGFGRRPVPGLKSSEIENLVAYQIGALQAIATAAGHKVTHVKAHGALSNV
ECCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCC
ACEDDMTANAIAKAIKAVDPSLIFVVLANSKLVTAGEKANLSMAHEVFADRAYDDNGLLV
CCCCCCCHHHHHHHHHHCCCCEEEEEEECCEEEECCCCCCHHHHHHHHHHCCCCCCCEEE
SRSKPGAVLHDPKQIADRVVRMVQDGAVVSVTGKVMKMRTDTVCIHGDTAGAVEIAREVR
ECCCCCCEEECHHHHHHHHHHHHHCCCEEEEECEEEEEEECEEEEECCCCHHHHHHHHHH
QALDAAGIKVAPFKRAP
HHHHHCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12597275 [H]